TCONS_00029388 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029388
Unique NameTCONS_00029388
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1138

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029388 ID=TCONS_00029388|Name=TCONS_00029388|organism=Clytia hemisphaerica|type=transcript|length=1138bp
AGGGAGCGTCTCCAaatgttgtttcaattttttcgtttcaaattgtttca
tgaaACGATTTAAAACGAAGTTCAAACGAAGTTCAAACGAAGCTCAAACG
AAATGCANAAAGAACAGTTTGTCTTCACTTGATTCTCTACAAGACATGAA
AGCGAGGCTGGAAGAATTGGAAAAAGATTTGAAGGCCACAATCCAAGAGG
AGGTTCGAATGATGAAAATACCAAACACATGCAAGACGCTATGAAGAAAT
TAGACGCAGAATTGGAACGCCATTCAAAGAGACAAGCATCAAAGAAATCA
GCTTCCGGTTTATCCTTTGATGAACTCATGGACGACATCAGAGAAACAGG
AAATACGCGAGACGACTTAAAGAATAAATTTTACAACATTATTGGTTACA
AACAATCATCTCAAGATGATGTCGATCAACATTTTAAACGAGGGTGTTTG
AACGAGCGTGGTTTTGATGAATATTGTGCTTTCTGGAACTTGTGTGtcga
aaatgaagataaaatgCGCCATTACTGTAACAAAGAATGTGGATTCTGTT
AAACGAGATCTGATTGGTTTAAATCTAAAAGATAGTCACCTTATTGGTTG
ATTTACAGGAAAGATAACGTGATTGGCttgaatttttatgaaatcaATTG
TTATAAACCGATGAACTTTTGGTCGTCTACCGTcatcgttttgtataaga
ttcccttTCTCGCACTAATATTCTCCTGGCTCTTCCGGAATCTTTTCGCT
ATTTTCCCGGGATAGCCGGCACGAGATTTGACAGGTTTTTCTTCTAAAGA
TACGGAAAATTTTGTGTTTACTTACGAAATTACCTAAACTTTCCGgagct
tatttttcaactacccggaGTTTTGGTCTTTTTCCGGTAGGAACGAGGCA
GATGCGGGAAAGAGAATCTTATGCAAAACAACGGTAATACGTTTATCAAA
CGATCATTGGTTATACACTGATTTTATTGTCAGTATTATTGTAATCTAGA
AACCTATTATCTTCGTTTATTATTTGTACATAATGTTTTATTATTTAGGA
AAATTTGACGAGTTTTAGAATTCTTGAGCTTGGAGAATAGTCGAAAAATA
TTACGGTTATCGCTATAAGTTTACTATCTAtcaaaaac
Run BLAST on NCBI

protein sequence of TCONS_00029388-protein

>TCONS_00029388-protein ID=TCONS_00029388-protein|Name=TCONS_00029388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MQDAMKKLDAELERHSKRQASKKSASGLSFDELMDDIRETGNTRDDLKNK
FYNIIGYKQSSQDDVDQHFKRGCLNERGFDEYCAFWNLCVENEDKMRHYC
NKECGFC
Run BLAST on NCBI

transcript from alignment at sc0000745:58244..70645+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029388 ID=TCONS_00029388|Name=TCONS_00029388|organism=Clytia hemisphaerica|type=transcript|length=12402bp|location=Sequence derived from alignment at sc0000745:58244..70645+ (Clytia hemisphaerica)
AGGGAGCGTCTCCAaatgttgtttcaattttttcgtttcaaattgtttca tgaaACGATTTAAAACGAAGTTCAAACGAAGTTCAAACGAAGCTCAAACG AAATGCANAAAGAACAGTTTGTCTTCACTTGATTCTCTACAAGACATGAA AGCGAGGCTGGAAGAATTGGAAAAAGGTGAGAGaattatttaattttgcg aGGGTATGGGTATATCCGAGCCGAATGTCGAATGTTGactgaaaaattca aacaaactaTTCGAAATCACATCCTCTTTAGAGGATTTGCTTTATAAAAA ACTACTTTGAAACCCTCACTAAGACTGTCATTCCTTTAAACCCCAGCAcc aattttaaatattttccgTTTATTCTCCGTTCATTCGAACCGATGGTAAG TATAATTTGATACCTCTTGTGCGGTGCCTGCTTGAGACTTCTAcggaaaa ttttatcaaacaagaGGTTGTAGCATATCGAACTacaatttttggtattt tgaggtcaatgttttcttttctctttccaCTTTAACCACAAAACCAAAGA TGTTCACATAGTAACTCatctttgaagtttttgtttgtcaaaatacCAGA ACTATGGTATCTTATGTCTAGGTATAAGAAGGCCATAGTTACACATAGCT ACAACCAATCATCTCATAATCCTCTCCTATCTAACATGGGATTGATAGGA TAGGGTCGTTCTTCTACTGTTAGTTATTTTGGCCGATTTTCAGGGTTAAA TTCTGGGAAAAATTCTCGAATTTTGTCTTGCTGACAGGGTTCTAAATTTG CCAAATATTCATATCCAACAGGGTctatttttcaaactccagcgacACGT CCTcctcggccgtcaaggtcagtgccccccccccccaccgggGATTTTGG AATCATCacttttgttcaaattttgacacgaaAAATATACGGATAAAATT GATAATCGGCCACTTGACCGAAAATTTCTACGCTACGCACATGGTTTTAC TGAAGCAGTAAGGCGAGATAAATTTAATTTCTGTTCTACGGGAAACCGTT CAGAAAATATGGGTctgtcggtcggtcggtcggtatagtagaaataattt ctttaaatcTAGAGTTGGAAGGTCAAGATctaaaataacaacaacaacaa taaattaaattggtctaatTAAGTCATTCTAACCTGCCAACctatatatt tttggacctacctccgggtgccccggtggaggttctataaattaacccat gtccgttcgtccgtccgtctgttaccagcttttctcaggattggctNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcattattcaacacacaagct ttatttttccattctgaatttttgtacaattattgtcactttttccttat tttcatctgatgttaatcattaggtaggtccattcagatCGAAGAGAAAG TTTCCCCGCCTTTGCAATTTGTAATTTGATTTGAGGAGGCCTTTCTGTCT TGACTGTTAAAAAGGAAAACACCCTGTTATTGCCATGTAAATCTTGTCAA AGTGTCTAGAATGTTAAAGAATTGGAAAGTTATTTTAAACAAGGGTCAAC GTGAGGGTCATACGTCACATATTTTTATGATGACTatgagaaagaggaaa aatagaCCACgtattatttttgtaaatttaatgCCGTCTGTAAAATAATA TGACCTTTGCAAACGCCTGAAGAATACTCTCTGCGTGCTTTTGAACCTGA AAAAGcaaactgttttaaatttatacttttttgtcgtggactttaaaaaa aaaaagttcacaaaaatattttaaaatgtgACTTTTTCAGAGGCTTTTTT AGTCAAACCTTCCGAGGTTCTGAAAACTTTGGACTTTGTAAGACCAAGTC ACCTTTTTTCGCAGTGAGAGGCTTGAACCCCCGCCCtcgccctcgttttc ggggatcgGCGGGTCATACTGCAATATTTCCTAGCTTATGTATTAGAGCT TTTGAATGGGGTTATGACAGATCAAAGATCATTCCTCTTCGATAGGAAAT CGACACGCGCGTTtaaagctttagcgtgggcggccgtcaatctacacgct tttttttataagaatacactttataagaatgtccatgatgaaaatggcca aaaaattaagaatatgctaagaatatcaccatcatagaattttgctagTC AAGTTAAGAATGCCGtttttagaccattttaaattataaattgtcaatta ggatcataacctaagaatgttgtaagaatattttaggatgattttcccat aaaagttaagaatattcatgatgaaatggatttacaccgtGTACCATTTA TTATCAGATAATTCGAAGGAATACGCTTTTAATTAAATTGTATGGGAGAA AACGGAATTTAAATTCGAAACAGACCGGAAAATGTTAGACAGAAAAATGG TAGGAGAAATATTAGAATGTATCAAGTTACGAATTGTTATTTCGCCGCTG TGAACTCGCTGAGacgaatttcgaaatccaaggGTTAATTTTCTTCGTGG CTCGTGTGAGTTTAATCTGGTAGGCTCTGCTCATCTTATTCAGCTAAAAA GCTTCGtataggaagtataggtctATGGGTGTGAGTATTGTGAGTGACAA ACTCGATAAATGTTGGTGGAGCTAAAAAAATCGGCTAAACTTACACAATT TTCCTGTTTTCTCTTTTCATTAGACTTTATCTTTAGTCACTCCTGATAAC CAAATCAAATGATATACGTTGATCAACATGGTGGACTTAATACTTTCTAA ATCCTTGTTTTAATCCTATGTTAGTTTTTAACAACTCATAAATGACGACC gtttaataaaaacatttatattttgtcaaacttaaaaataaactacattt aagaaaataagaacagtttttACTAGAGCGCCAAAAtcaatgaacaaatt aaaaaaatactagtCTCTCAGATTTAAAAATGGCTAAATAAGTCATACTT TGAGATatttttaagcctgaaaatcacGAAAGTATAAGAACAGATGAGCC TTAGCTAAAATtgactggttcttataaaaaaatgtggtGGGATAGAGTCT TGATAACTCGAAAGCCCATggggaacgcaaatttgttcgagttaaaaaac TTTCGAGTTATGCAGATACTagtataaggcattgttaattgTAGGGACGa tcaaacttgttcgagttaagaagacatTTGAATGATAGAGGTTCGAGAAA CTCCACTGTATTTTCACAATCAGTGTCTCTCAAAACTAACACTGTAATAG TCTAATTAATTAGTAAAATCTTTGAGCACTAAAATATTTAAGGCTATGTA CTTCAATTTGTAAACTTAACAATCCCATTGGACTTTTTATCGTGACTAGA AAGACGTTACTTCTAGCAAGggttttaaaagatattttcaaaaatgagtg gtGTCCATAGGCTGTTTTAGACCATGTCAAACTTCTCAGGGGAAGAGATT Tgcaattgtaatttcattgtcttttaaacgagcgttgcactccttcgcat aTTTCGGACGTATTTGCTCTGTTATCTTAATTCCGCCAATGTTGTCTTCA TAAAAGTACCTTACTTATAAAATTCGTGTacataaaaatcaaataatCTA GTAGACAAACGGTAAAGAAATTTGTCTAAAGAAGACTACAAGTATTGTCA TTTTTTTGGTATCACGTATCTCTTTGTTTGCCAAATGAGCTGggcatttt caaattcaaacattaggttgtttttttaaccaatttttttgctttgaCAT TGTTCATAAGACACGAAAGTTTGTCCAATCAATAGACGGCTTCTATGATA TTACTATTACTACTGTGTTAGAGTTTCCATAAGGCTAAACATTAGATGAA CAATTTGTACTGTAATATACaacacaccccttctcacaaacccactggaa acccttcccactgggaaAATGGTCCACAATATCGTCTCCGgttgaaaatt atcctccagtttttgtccctactgaaaataatcaaataaaccaatcatcg ctgcaaaatattatgctattttcccatccccactgaattttctgatacat CAATCTCCATCGAGCTTCAGTTTTATCCCCTGTTGTgtgcagatttgtaa tacttgcgcagatttgtaatacctgcgcagatttgtaatactttctgcgc agatttgtaatactttctgcgcagatttgtaatacctgcgcagatttgta ataaattttgcgcaaatttgtaatacttgagctgcgcagaaatgtaatac ttctctgcgaagatttgtaatttggaatttagatttttacttcGAGGGCA TATGTTTCCCACgaagaaaagtttcgaaaaaagacttagaaaataatcag aaaatcacACAAAGGTTGTATATCTTTAGTATgaacattaactttataag aaacgaatcaatatattttaatttaatgaaaattggcttttggcagttgg ttcATTACAAACATGGATTGGgaataattttaagcattttcatttttctc ataagtatcaactttataagaaacgaatcaatatctttcaatctaatgga aattggctttcggcagttggttctttcaatacaaacatgggattttgaaa aatttcgatattttcatttttcttataagcatcaacttttataagaaacg aatcaatatattttaatctaatgaaaattggctttcggcagttggttctt tcaatacaaacatgggattttgaacaatttcgatattttcatttttctNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNCATCAACTTTATaaaaaacgaatcaa tatatttcaatctaatgaaaattggctttcggcagttggttctttcaata caaacatgggattttgaatacaatttaaatattttcatttttcctataag catcaactttataagaaacgaatcaatatattttaatctaatggaaattg ttcgaataattttctttttcatctttatgtattttttctatctaacaaca acaaaaaacataccGAAGCTTCAACCATCAAactctttttgaaagaaagt ttactaaaaataattttacttgaGATATCATGCTGGAATGTAATGCAGGT GCTATGAAAGGTTATAAAAGAAATCCAGTCAGAGGGGACAGGTTTCCTAT CTGGGTAGAAGGTGGTTTTAGAgcaaatcaatattttcttatCATATCAT CTTATAAATTGTTCATCAATTTTGGTACTACCTcttgaaatgataaaatg ttgacaaaaatatttttatatcattaattgttttttcataacaaaGTGCA TCCCATACaccctgtgcccaagttcaggagttgccataatgccattatgg taataaccgggagggcacatttcTATACTTTGTAACAAAGTGGTTATAAA AATAAACATGTTCATAttattcttcgtaccttgtttacttcgaaataaac aattaccgacaagaaataatttttattttacgagttattgattagtttct tgtaaaagcagttcttataaaaaatgaatatgttcatgttattcttcgta ccttgtttacttcgaaataaacaattactgacaagaaataatttttattt tacgagttattgattagtttcttataaaagcagttcttataaaaaatgaa tatgtccatgttattcttcgcaccttgtttactttgaaataaacagCTAC Cgacaagaaattatttttattttacgagttattggttagtttcttataaa agcagtgcttATAGAAAATATGTTaatgttattcttcgtaccttgctcac ttcgaaataaacaattaccgacaagaaattatttttattttacgatttat tgattagtttcttataaaagcaattcttatgaaaaatgtacatgttcatg ttattcttcgtaccttgtttactttaaaataaacaattaccgacaagaaa tattttttttattttacgagttattgattagtttcttataaaagcagtgc ttataaaaaataaatatgttcatgctattcttcgtaccttgtttacttcg aaataaacaattaccgacaagaaataatttttattttacgagttattgat tagtttcttataaaagcagttcttataaaaaattatgtccgcgctattct cataaacaatttttatattaccagataaatttcttataaaagctctgctt acaaaagaaatattaattgattatttatttGATGTGCTCGATAATCACAA CTTTATTTGGGTATTATTTTATAAGtctttttaatgcattttgttcgcag aatagaatttggttaccaatgaaaatatcaattccaaattacaaatctgc gcagagaagtattacatttctgcgcNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa agtattacaaatttgcgcaaagtttattacaaatctgcgcaggtattaca aatctgcgcaagtattacaaatctgcgcacaacatcctctctgtgagaag ggggtgttacaACAATCACATATTACCTTacagcgaccgtagtacagtgg tagagcatccggctacggttcgcaaggttgtgggttcaacccccagccgg gtcataccaaagattcccaaaatggtactcNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtagatagctat cgaaagaggagccttcgggtcgcctccgactgcggtcgcagacttactta cttactacttaTTACCTTAAAGAATCATCTGCAAAGTGTGTCACCGGGAA AAGTAATTCTCTAAGATAGATTGTCGGATATCTTATTTAAACGAGCTCTC GGTTCTTTAGCTTCTAATCACACACAGGTGGGGGGCTCATTATGTAATTG GTCGCGTGGAAAAAATAACAAGAATCAAAGCTCTTCTCAGCTCAGTTTAC AAGAGGAACGCTGGTTAAACTGTTTCAGAGATTCTCGAGTTATCAGAGGG ATACTGACAGCCTATAGAGACATCAGACATTTAATGGGTTGTTATTTCAT CTTCATAAGTCTAAAATACTTCAAAAGGAAGTCATGGAACCATTAAAAGG CCAAGATagcttcccagctggcacacaacgttgtttcgacgtttatctaa tcttcataacgtccatataacgttaggtgaacgttgaaacaacgttgtgt gctagctgggttTAACTTCTTATAAGGAATTTAGGGTCTATCTTTGGGAT AGACTGATCCCTTTATTTATTACATCTCTCTTTACATTCTACCCCTTGCT TAAAATAAACGATTCAACAATTTCTTTCTCCTTCAGATTTGAAGGCCACA ATCCAAGAGGAGGTTCGAATGATGAAAATACCAAACACATGCAAGACGCT ATGAAGAAATTAGACGCAGGTtaatatttcatttatttatgtttttttct tcttcctagGAAGGCTTAATTATGTAAAATTTAGTTCGTTTTCTTTGTAA TCAACTAAATTATGTATCGAGCTTTGGCCGAATCTGGCTTTTTAGCAATC ATTTGGACGATTGTGGCTTTTACTAGAGTTTTCACCCTAAGGCTTCGAGG TTTTGCTTCTTCAATATTCCTCCCTAAAAAAGGGTGTTTTCAATTTTaca cccttgtctcacagccgcggtggaaccttttcctaagtggggataaaaac tcttattgaaatcctaatggggatagaaattatattgttccaatGTTAAA AAACccggtggggatggttttggagtgcaatttttaaacatggaatatca aatggggataaaaatcaaAGTCCATTCCCCAGTGGGGGTGAAATTCAAga gtattttcccaccggggacgaaatttttgcttaatttcccagtggggctg gagTCGCAGCGGGTCTGTCACACAGGTGTGTAATTTTAGGCATTTTATTG ATACAGGGAGTTAAACCATTTTCAGATATTAAGTGGTAGTGTGATAACAT TTAAGAGATGAAAATTCTaagattttttggtatttcctgTAAAAATTAAG CAGAAAACTGTAACCACTTCCCCAAATGTGAAAAATCATGGGTACGCTTC TGGAGGGGAGAGTTTGACATCTACCAGTTACATTATTTTATTGAACAAAA CTAAactcaaaattaaaaacaaagatcGCTGCtgtatttatatatttatt ttaagatctttattttcttactttttactgCTAGAATTGGAACGCCATTC AAAGAGACAAGCATCAAAGAAATCAGCTTCCGGTTTATCCTTTGATGAAC TCATGGACGACATCAGAGAAACAGGTTTGTAGCATTTCCAAGGCCTTCTC GACCTTCGCTATTGtctaaattgctttacattcattagactagagtctac ttttggctgaactttgctttttgatgatttttttatgacacTGAGTCCAG TGaattaatcgcgccatccagtctataaaaaagctttaaattgAACCCCA GGCTTTACATTTATCTACTAAAGATCGATGCGCGCATCAACTCGGACCCA GTCCTCTTTATCTAGATCCACTTGCATGTATCTTTTCAACAATACTGATA ATATGTTCTCTTTCATTATAGGAAATACGCGAGACGACTTAAAGAATAAA TTTTACAACATTATTGGTTACAAACAATCATCTCAAGATGATGTCGATCA ACATTTTAAACGTGAGTTATCTCAACGTCAAGTTGACATTCATTTAACGT TCAAAAGCGTTACACTCCGTTATTTCTGAACAATCTTTTCTAACGACTCA TTTGAAATTTCAGGAAATATCTTGAAACTCTGATCTATTATGTGGATTAT GgcgcccccttctcacagaccaacgGGGACCCCTTCCCaatggaaaaatt ggctaagtatcgtcccagtggaaaattatactacGATGAGTTTTtgtccc gctgaaaataatcaaataagcaaatcctcactgcaaaatactgTGCTATT CTTTCCATCCTCACTGAGTTTTATGGCTCAAAagcaatggaattcaaatc cccagccttTAAAAACACCTGAAAATCGATCCCCATCGctttttggtccg ttatttttaaaaatcctaccgggtctgtgagaaggggatgtattATGTAG AAAAAGTCCAAATTACGCCcataatagtagggggaaatttgttcgttttt ttgaggtcgctcggtttttttagtcaaagcacttgttatacatttttgga aagctaaggggtaggggaatcaaaaaaacttgggtgccaatttacctaac tcgagatattaatccttaaaaacagttatTAAATACTTATTGTCCGCAAA CTTGCAACCTTTGTGGTGGTATGTAGCTTTCATATTTTTCTCTAAACTTC CTTTTAAGTATACTAATTTTGGTgtgtatttaatttggcgtttggccaaa atgcgatttttggcgGTTCTTTAATATGGATGATGGGGAAATTTTAGGAG CTTGTagattaaagggacataacagtacttgcgaaatttgtaaacaaact gtatgcagcggatacaaaatcaaaacaaatgtcacatgtcaaaataaaaa atcaaaccaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttca attgttttacaagtttgttttggacgcGTGATttcaattgttctctttaa tgacacgtggttcgcgcaatgtttacattttactacttttatgtcacTTT AAAAATTACgtctcaaaacattttttacttaaaaaggCTGGATCATATAT AATTTTACCCtaaaagatttttgttaaatttgactGGGATTTACTTTGGC GGCTTTTACCAACAACGAACTTTGTTCCGCGAATCATCATGAATGACTAA CAGTCCGCGAAAGgttattttcacaaaattttctatttccttACCAAACG CCAATTGGGCGGTGACTATAATcctttcaagtcaaaaaaaaaatttcttg aaaaccactggaaaatggcaaaatttacatccttgcaaaattattttttc atactaCACCCCCTGGAAACGCGTTCATCCACCTCCCTGTATGAATATAA GATGGCCCATTATAACACTGAagagattataaaaatattttccaatttta CAGGAGGGTGTTTGAACGAGCGTGGTTTTGATGAATATTGTGCTTTCTGG AACTTGTGTGtcgaaaatgaagataaaatgCGCCATTACTGTAACAAAGA ATGTGGATTCTGTTAAACGAGATCTGATTGGTTTAAATCTAAAAGATAGT CACCTTATTGGTTGATTTACAGGAAAGATAACGTGATTGGCttgaatttt tatgaaatcaATTGTTATAAACCGATGAACTTTTGGTCGTCTACCGTcat cgttttgtataagattcccttTCTCGCACTAATATTCTCCTGGCTCTTCC GGAATCTTTTCGCTATTTTCCCGGGATAGCCGGCACGAGATTTGACAGGT TTTTCTTCTAAAGATACGGAAAATTTTGTGTTTACTTACGAAATTACCTA AACTTTCCGgagcttatttttcaactacccggaGTTTTGGTCTTTTTCCG GTAGGAACGAGGCAGATGCGGGAAAGAGAATCTTATGCAAAACAACGGTA ATACGTTTATCAAACGATCATTGGTTATACACTGATTTTATTGTCAGTAT TATTGTAATCTAGAAACCTATTATCTTCGTTTATTATTTGTACATAATGT TTTATTATTTAGGAAAATTTGACGAGTTTTAGAATTCTTGAGCTTGGAGA ATAGTCGAAAAATATTACGGTTATCGCTATAAGTTTACTATCTAtcaaaa ac

Coding sequence (CDS) from alignment at sc0000745:58244..70645+

>TCONS_00029388 ID=TCONS_00029388|Name=TCONS_00029388|organism=Clytia hemisphaerica|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000745:58244..70645+ (Clytia hemisphaerica)
ATGCAAGACGCTATGAAGAAATTAGACGCAGAATTGGAACGCCATTCAAA
GAGACAAGCATCAAAGAAATCAGCTTCCGGTTTATCCTTTGATGAACTCA
TGGACGACATCAGAGAAACAGGAAATACGCGAGACGACTTAAAGAATAAA
TTTTACAACATTATTGGTTACAAACAATCATCTCAAGATGATGTCGATCA
ACATTTTAAACGAGGGTGTTTGAACGAGCGTGGTTTTGATGAATATTGTG
CTTTCTGGAACTTGTGTGtcgaaaatgaagataaaatgCGCCATTACTGT
AACAAAGAATGTGGATTCTGTTAAATGCAAGACGCTATGAAGAAATTAGA
CGCAGAATTGGAACGCCATTCAAAGAGACAAGCATCAAAGAAATCAGCTT
CCGGTTTATCCTTTGATGAACTCATGGACGACATCAGAGAAACAGGAAAT
ACGCGAGACGACTTAAAGAATAAATTTTACAACATTATTGGTTACAAACA
ATCATCTCAAGATGATGTCGATCAACATTTTAAACGAGGGTGTTTGAACG
AGCGTGGTTTTGATGAATATTGTGCTTTCTGGAACTTGTGTGtcgaaaat
gaagataaaatgCGCCATTACTGTAACAAAGAATGTGGATTCTGTTAAAT
GCAAGACGCTATGAAGAAATTAGACGCAGAATTGGAACGCCATTCAAAGA
GACAAGCATCAAAGAAATCAGCTTCCGGTTTATCCTTTGATGAACTCATG
GACGACATCAGAGAAACAGGAAATACGCGAGACGACTTAAAGAATAAATT
TTACAACATTATTGGTTACAAACAATCATCTCAAGATGATGTCGATCAAC
ATTTTAAACGAGGGTGTTTGAACGAGCGTGGTTTTGATGAATATTGTGCT
TTCTGGAACTTGTGTGtcgaaaatgaagataaaatgCGCCATTACTGTAA
CAAAGAATGTGGATTCTGTTAAATGCAAGACGCTATGAAGAAATTAGACG
CAGAATTGGAACGCCATTCAAAGAGACAAGCATCAAAGAAATCAGCTTCC
GGTTTATCCTTTGATGAACTCATGGACGACATCAGAGAAACAGGAAATAC
GCGAGACGACTTAAAGAATAAATTTTACAACATTATTGGTTACAAACAAT
CATCTCAAGATGATGTCGATCAACATTTTAAACGAGGGTGTTTGAACGAG
CGTGGTTTTGATGAATATTGTGCTTTCTGGAACTTGTGTGtcgaaaatga
agataaaatgCGCCATTACTGTAACAAAGAATGTGGATTCTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016763XLOC_016763Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029388-exon-sc0000745-1491911889:58244..58419TCONS_00029388-exon-sc0000745-1491911889:58244..58419Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1510915933:58244..58419TCONS_00029388-exon-sc0000745-1510915933:58244..58419Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1575043694:58244..58419TCONS_00029388-exon-sc0000745-1575043694:58244..58419Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1491911889:67030..67112TCONS_00029388-exon-sc0000745-1491911889:67030..67112Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1510915933:67030..67112TCONS_00029388-exon-sc0000745-1510915933:67030..67112Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1575043694:67030..67112TCONS_00029388-exon-sc0000745-1575043694:67030..67112Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1491911889:67928..68017TCONS_00029388-exon-sc0000745-1491911889:67928..68017Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1510915933:67928..68017TCONS_00029388-exon-sc0000745-1510915933:67928..68017Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1575043694:67928..68017TCONS_00029388-exon-sc0000745-1575043694:67928..68017Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1491911889:68315..68404TCONS_00029388-exon-sc0000745-1491911889:68315..68404Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1510915933:68315..68404TCONS_00029388-exon-sc0000745-1510915933:68315..68404Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1575043694:68315..68404TCONS_00029388-exon-sc0000745-1575043694:68315..68404Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1491911889:69947..70645TCONS_00029388-exon-sc0000745-1491911889:69947..70645Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1510915933:69947..70645TCONS_00029388-exon-sc0000745-1510915933:69947..70645Clytia hemisphaericaexon
TCONS_00029388-exon-sc0000745-1575043694:69947..70645TCONS_00029388-exon-sc0000745-1575043694:69947..70645Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029388-proteinTCONS_00029388-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000745supercontigsc0000745:58244..70645 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.02015 0.843285 0.737997 0.557995 1.33677 1.11862 0.387174 0.351085 0.886394 1.12649 1.0896 1.32303 5.16916 4.10975 3.47563 6.5705 4.5346 6.31269 14.8258 15.7919 21.215 18.7216 10.8451 15.0574 2.36569 3.57544 59.5235 45.5915 4.95518 11.3405
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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