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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029446 ID=TCONS_00029446|Name=TCONS_00029446|organism=Clytia hemisphaerica|type=transcript|length=1418bp
ctttccaacgctACCAAACATTAAGGGTTTAGCTATCACCAAAGCCGAGA
TAATTTGATTCAATGTTGTTTCAATTCTTTTAGCTTTTTGAAAGCGTCAT
GGAGTTAAAAAGTGGTGCAAGCGACTATGCCTACGGAGATTAAACCGAAT
GTAGATTGTTTATCAGTAAATCATTTTGCAGtgaattcattttcttttag
aTAATTATCTTTAACAGACatacttaattttgaaaataaaaatggccACA
GAAGGCAAAGCTGATTTTTTCTCCTCCGGCTACGCAGAAGCACAACGCGC
GGGCAATATGGTCGACTATTACAACAACAACGCAAGCTCGTACAACGAAA
CTCTGGAACAAGCAGGATATACAGACACAACAGTCTATTGTTCTAATCTC
CTCAGAGAATACCTTTCAGCAGAAAGAGATGAGAACAAGATTGCTGAGTT
GGAAATTCTCGATTTGGGATGTGGTTCAGGATTAACAGGCGTTGCCCTAC
AGAAAGTAGGGTTCAAACTGATCGACGGTGTAGATCCAGCTGACAAAATG
CTACAGGTGGCAAGAGAGAAATCGGTGTATAGaaatctttccaacggtat
caTTACAGATATGGAAAAATTGAGTTGCTACCAAGCTGAATCATATGATG
GCTTGCTATGCATCGGATGTTTCACTGTGGGTCATATTAAGTTCAATAAC
GGTATACAAGAGATTTTAAGAATTCTCAGGAAGGGTGGTATAGCTGTTTA
TACCATTTCCTCAAAACTGGATTGTCCGGCAATCATGAATGAACATATGC
CATTCTTTCTTCGCAAACAATGCGAAATGATACGCgtggaaaagagattt
ttttataattcaGGCAGCAACGATAAGAAGTATTGCAACGTGTATGTTGT
CAAGAAACTTTAAATtaggaaatatcttttgaaccTTCTTACTTACTCAT
TGAATATTGTAATGTTACAAGTATCAAGTTTaaaagccgaaggctagaga
gGAAATCTTCCACTGGGTTCCAACCCGAAGGACTAGACTCGAGACAATCC
AtcgtcatgattgcggtgcGTTCTAGGCGCACGatctgatgaaaaattag
tGGCTTTACTGGAAAATCAGTGGCTTCCCATGGCAATTTCCCATCccttt
cccatccaagagtccCTCTCTAGCCCTTTTCGGGCATTAAGCTCAATGGT
TGAAAGTTAATAGATTCCTGTAGTTTGCTTTggataaaacttttttgtat
tTGTATAGCACTTTTCATTGTACACATAATTAAATGGCCCCTTAAATTAG
ATAtaggattttttttaatcaattttttttcgagatAAGCCAcattgtat
tattttttaaagtctccatTAGTAATCCAATaattgcctgaagattgtca
tACAAAGTGGCATTAAAC Run BLAST on NCBI transcript from alignment at sc0000748:69721..71138- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029446 ID=TCONS_00029446|Name=TCONS_00029446|organism=Clytia hemisphaerica|type=transcript|length=1418bp|location=Sequence derived from alignment at sc0000748:69721..71138- (Clytia hemisphaerica)
CTTTCCAACGCTACCAAACATTAAGGGTTTAGCTATCACCAAAGCCGAGA
TAATTTGATTCAATGTTGTTTCAATTCTTTTAGCTTTTTGAAAGCGTCAT
GGAGTTAAAAAGTGGTGCAAGCGACTATGCCTACGGAGATTAAACCGAAT
GTAGATTGTTTATCAGTAAATCATTTTGCAGTGAATTCATTTTCTTTTAG
ATAATTATCTTTAACAGACATACTTAATTTTGAAAATAAAAATGGCCACA
GAAGGCAAAGCTGATTTTTTCTCCTCCGGCTACGCAGAAGCACAACGCGC
GGGCAATATGGTCGACTATTACAACAACAACGCAAGCTCGTACAACGAAA
CTCTGGAACAAGCAGGATATACAGACACAACAGTCTATTGTTCTAATCTC
CTCAGAGAATACCTTTCAGCAGAAAGAGATGAGAACAAGATTGCTGAGTT
GGAAATTCTCGATTTGGGATGTGGTTCAGGATTAACAGGCGTTGCCCTAC
AGAAAGTAGGGTTCAAACTGATCGACGGTGTAGATCCAGCTGACAAAATG
CTACAGGTGGCAAGAGAGAAATCGGTGTATAGAAATCTTTCCAACGGTAT
CATTACAGATATGGAAAAATTGAGTTGCTACCAAGCTGAATCATATGATG
GCTTGCTATGCATCGGATGTTTCACTGTGGGTCATATTAAGTTCAATAAC
GGTATACAAGAGATTTTAAGAATTCTCAGGAAGGGTGGTATAGCTGTTTA
TACCATTTCCTCAAAACTGGATTGTCCGGCAATCATGAATGAACATATGC
CATTCTTTCTTCGCAAACAATGCGAAATGATACGCGTGGAAAAGAGATTT
TTTTATAATTCAGGCAGCAACGATAAGAAGTATTGCAACGTGTATGTTGT
CAAGAAACTTTAAATTAGGAAATATCTTTTGAACCTTCTTACTTACTCAT
TGAATATTGTAATGTTACAAGTATCAAGTTTAAAAGCCGAAGGCTAGAGA
GGAAATCTTCCACTGGGTTCCAACCCGAAGGACTAGACTCGAGACAATCC
ATCGTCATGATTGCGGTGCGTTCTAGGCGCACGATCTGATGAAAAATTAG
TGGCTTTACTGGAAAATCAGTGGCTTCCCATGGCAATTTCCCATCCCTTT
CCCATCCAAGAGTCCCTCTCTAGCCCTTTTCGGGCATTAAGCTCAATGGT
TGAAAGTTAATAGATTCCTGTAGTTTGCTTTGGATAAAACTTTTTTGTAT
TTGTATAGCACTTTTCATTGTACACATAATTAAATGGCCCCTTAAATTAG
ATATAGGATTTTTTTTAATCAATTTTTTTTCGAGATAAGCCACATTGTAT
TATTTTTTAAAGTCTCCATTAGTAATCCAATAATTGCCTGAAGATTGTCA
TACAAAGTGGCATTAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029446-exon-sc0000748-1575043694:69721..71138 | TCONS_00029446-exon-sc0000748-1575043694:69721..71138 | Clytia hemisphaerica | exon |
| TCONS_00029446-exon-sc0000748-1510915933:69721..71138 | TCONS_00029446-exon-sc0000748-1510915933:69721..71138 | Clytia hemisphaerica | exon |
| TCONS_00029446-exon-sc0000748-1491911889:69721..71138 | TCONS_00029446-exon-sc0000748-1491911889:69721..71138 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000748 | supercontig | sc0000748:69721..71138 - |
Blast
The following BLAST results are available for this feature:
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