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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029581 ID=TCONS_00029581|Name=TCONS_00029581|organism=Clytia hemisphaerica|type=transcript|length=1148bp
GCATATTGCAgggatcatttgaaaaaatacaagCATCTCGAAGAAGCAAC
TGAATCTGAAACAGACGATTTGGAATTCCCCGGAGTGAATTCATTGTCTG
GAGATAGCAAGGAAAATGTCTCTAATCACATGGAAGCATCTGAAAATGCG
ACGAAAGAATCTACTGAGAAATATAATCGAGAAGAGGAATCTAATGCTGA
AGTTACATCCTCTGAATCTTCTCcatttatgaaaaataaaagtgaagaga
atgaacaaaataataaaatgaatcCACCACAGATCTTTTGTGAAGACCAT
GCTTGTTTTGTTTGCGTTCAAAATGCACCAGACAAAGTTTCCAATGCTGC
TGAAGACAAAGAACCAAGGAACACGTGTACTGACCACCCACTATGTACTG
CAATGATTGATGAAGACTTCTGCTCAAACGAGGTTGTTCCTGAGACTTTT
CTTTGTCAAGAGCATGCTTTTTCAATATGTCAGGCCATAGAGGAAGACAA
AAAGTGCACACAGTTTGTGGTGTCAAGAGGTGAGCCATATTGCGAAAATC
ACAAACCAAAGCCAAAGCCAAAAGTGAAAAAGTCTTACACGAAGTGCCAA
GCGAAGAGTAGCACAGGTAAATCATGCAAAGGAAAATTACTTCCCGGTCA
TGTATATTGCAGGGGTCATTTGGATAGATACAAACATCTCGGAGAAGCAA
CTGAATCTGAAACAGACGATTTGGAATTCCCCGGAGTGAATTCATTGTCT
GGAGATAGCAAGGAAAATGTCTCTAATCACATGGAAGCATCTGAAAATGC
GATGAAAGAATCTACTGAAAAAGATAATCAAGAAGAGGAATCTAATGCTG
AAGTTACATCCTCTGAATCTTCTCCatctatgaaaaataaaagtgaagAG
GATGAAGAAAATAAAGAGATTGATGGTGAAGACGACGAGTTTCGTGACAC
TTACACAGAACAAGTTCCAGATGAAGACTTGCGTCACCATGACGATGAAG
ATGATTTCTATGACGATCAGTATGAGCATATGAAAGATGTGTTGGGAATG
GAAGAACGAGAAGATCTTGGTGgtggagaagaagaagaaattgataaaaa
caaagaagatGAAGATCTGGTTGCAACTGAATATGAATATGAACAAGA Run BLAST on NCBI protein sequence of TCONS_00029581-protein >TCONS_00029581-protein ID=TCONS_00029581-protein|Name=TCONS_00029581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
AYCRDHLKKYKHLEEATESETDDLEFPGVNSLSGDSKENVSNHMEASENA
TKESTEKYNREEESNAEVTSSESSPFMKNKSEENEQNNKMNPPQIFCEDH
ACFVCVQNAPDKVSNAAEDKEPRNTCTDHPLCTAMIDEDFCSNEVVPETF
LCQEHAFSICQAIEEDKKCTQFVVSRGEPYCENHKPKPKPKVKKSYTKCQ
AKSSTGKSCKGKLLPGHVYCRGHLDRYKHLGEATESETDDLEFPGVNSLS
GDSKENVSNHMEASENAMKESTEKDNQEEESNAEVTSSESSPSMKNKSEE
DEENKEIDGEDDEFRDTYTEQVPDEDLRHHDDEDDFYDDQYEHMKDVLGM
EEREDLGGGEEEEIDKNKEDEDLVATEYEYEQ Run BLAST on NCBI transcript from alignment at sc0000756:45575..46722 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029581 ID=TCONS_00029581|Name=TCONS_00029581|organism=Clytia hemisphaerica|type=transcript|length=1148bp|location=Sequence derived from alignment at sc0000756:45575..46722 (Clytia hemisphaerica)
TCTTGTTCATATTCATATTCAGTTGCAACCAGATCTTCatcttctttgtt
tttatcaatttcttcttcttctccacCACCAAGATCTTCTCGTTCTTCCA
TTCCCAACACATCTTTCATATGCTCATACTGATCGTCATAGAAATCATCT
TCATCGTCATGGTGACGCAAGTCTTCATCTGGAACTTGTTCTGTGTAAGT
GTCACGAAACTCGTCGTCTTCACCATCAATCTCTTTATTTTCTTCATCCT
cttcacttttatttttcatagatGGAGAAGATTCAGAGGATGTAACTTCA
GCATTAGATTCCTCTTCTTGATTATCTTTTTCAGTAGATTCTTTCATCGC
ATTTTCAGATGCTTCCATGTGATTAGAGACATTTTCCTTGCTATCTCCAG
ACAATGAATTCACTCCGGGGAATTCCAAATCGTCTGTTTCAGATTCAGTT
GCTTCTCCGAGATGTTTGTATCTATCCAAATGACCCCTGCAATATACATG
ACCGGGAAGTAATTTTCCTTTGCATGATTTACCTGTGCTACTCTTCGCTT
GGCACTTCGTGTAAGACTTTTTCACTTTTGGCTTTGGCTTTGGTTTGTGA
TTTTCGCAATATGGCTCACCTCTTGACACCACAAACTGTGTGCACTTTTT
GTCTTCCTCTATGGCCTGACATATTGAAAAAGCATGCTCTTGACAAAGAA
AAGTCTCAGGAACAACCTCGTTTGAGCAGAAGTCTTCATCAATCATTGCA
GTACATAGTGGGTGGTCAGTACACGTGTTCCTTGGTTCTTTGTCTTCAGC
AGCATTGGAAACTTTGTCTGGTGCATTTTGAACGCAAACAAAACAAGCAT
GGTCTTCACAAAAGATCTGTGGTGgattcattttattattttgttcattc
tcttcacttttatttttcataaatgGAGAAGATTCAGAGGATGTAACTTC
AGCATTAGATTCCTCTTCTCGATTATATTTCTCAGTAGATTCTTTCGTCG
CATTTTCAGATGCTTCCATGTGATTAGAGACATTTTCCTTGCTATCTCCA
GACAATGAATTCACTCCGGGGAATTCCAAATCGTCTGTTTCAGATTCAGT
TGCTTCTTCGAGATGcttgtattttttcaaatgatcccTGCAATATGC Coding sequence (CDS) from alignment at sc0000756:45575..46722 >TCONS_00029581 ID=TCONS_00029581|Name=TCONS_00029581|organism=Clytia hemisphaerica|type=CDS|length=1146bp|location=Sequence derived from alignment at sc0000756:45575..46722 (Clytia hemisphaerica)
TTGTTCATATTCATATTCAGTTGCAACCAGATCTTCatcttctttgtttt
tatcaatttcttcttcttctccacCACCAAGATCTTCTCGTTCTTCCATT
CCCAACACATCTTTCATATGCTCATACTGATCGTCATAGAAATCATCTTC
ATCGTCATGGTGACGCAAGTCTTCATCTGGAACTTGTTCTGTGTAAGTGT
CACGAAACTCGTCGTCTTCACCATCAATCTCTTTATTTTCTTCATCCTct
tcacttttatttttcatagatGGAGAAGATTCAGAGGATGTAACTTCAGC
ATTAGATTCCTCTTCTTGATTATCTTTTTCAGTAGATTCTTTCATCGCAT
TTTCAGATGCTTCCATGTGATTAGAGACATTTTCCTTGCTATCTCCAGAC
AATGAATTCACTCCGGGGAATTCCAAATCGTCTGTTTCAGATTCAGTTGC
TTCTCCGAGATGTTTGTATCTATCCAAATGACCCCTGCAATATACATGAC
CGGGAAGTAATTTTCCTTTGCATGATTTACCTGTGCTACTCTTCGCTTGG
CACTTCGTGTAAGACTTTTTCACTTTTGGCTTTGGCTTTGGTTTGTGATT
TTCGCAATATGGCTCACCTCTTGACACCACAAACTGTGTGCACTTTTTGT
CTTCCTCTATGGCCTGACATATTGAAAAAGCATGCTCTTGACAAAGAAAA
GTCTCAGGAACAACCTCGTTTGAGCAGAAGTCTTCATCAATCATTGCAGT
ACATAGTGGGTGGTCAGTACACGTGTTCCTTGGTTCTTTGTCTTCAGCAG
CATTGGAAACTTTGTCTGGTGCATTTTGAACGCAAACAAAACAAGCATGG
TCTTCACAAAAGATCTGTGGTGgattcattttattattttgttcattctc
ttcacttttatttttcataaatgGAGAAGATTCAGAGGATGTAACTTCAG
CATTAGATTCCTCTTCTCGATTATATTTCTCAGTAGATTCTTTCGTCGCA
TTTTCAGATGCTTCCATGTGATTAGAGACATTTTCCTTGCTATCTCCAGA
CAATGAATTCACTCCGGGGAATTCCAAATCGTCTGTTTCAGATTCAGTTG
CTTCTTCGAGATGcttgtattttttcaaatgatcccTGCAATATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029581-exon-sc0000756-1491911889:45575..46722 | TCONS_00029581-exon-sc0000756-1491911889:45575..46722 | Clytia hemisphaerica | exon |
| TCONS_00029581-exon-sc0000756-1510915933:45575..46722 | TCONS_00029581-exon-sc0000756-1510915933:45575..46722 | Clytia hemisphaerica | exon |
| TCONS_00029581-exon-sc0000756-1575043694:45575..46722 | TCONS_00029581-exon-sc0000756-1575043694:45575..46722 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000756 | supercontig | sc0000756:45575..46722 . |
Blast
The following BLAST results are available for this feature:
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