TCONS_00029951 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00029951
Unique Name	TCONS_00029951
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2147

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000778:80919..96945-

transcript sequence

>TCONS_00029951 ID=TCONS_00029951|Name=TCONS_00029951|organism=Clytia hemisphaerica|type=transcript|length=2147bp
GGAGAGACTTGGAAAGACAGACAAATGAAACACTTTTTATCCAAAATGGT
ATGCTTGAAGTATATGACAACACGACAGATTCGGAAAAGTTGAACCTAAG
TAAGAAAGTTTTGAATGACCTCAATGTGCCATATAAAGTGCTCAACACAG
AAGAAATCAATCGAAAATATAAACCATTTCATTTTGAAGGTGATTATTCA
GCAATTTTCGAGTCCCTAGGTGGAACTCTCATGGCTAATAAATGTCTTCA
AGCTTTTCAGACATTGTATAAGGAAGCTGGTGGAGTTCTCCATGACAACG
AGCAAGTCAAACAAATCATCCCTGGCAACGATCTAGTCACCGTTGTAACC
AATAAATCACAATTCAAAGCTAAATCTTTGGTCATCACTGCAGGATCTTT
CGTGGCAAAATTATTAAAGCCATTACATTTGGATTTGCCATTGACGATTC
AGAGAAACCATTTATGTTTTTGGAGAGTCCACAATGACGGTGAGGGGACA
CTGGAAGCAGGATTCCCATCGTTTAAAACACCGTATCTCACTTATGGTAC
TGCTTCTATCGAGTATCCTGGTTTATTGAAGATATGCTCTCATGGAGGAC
CTACCGTTGATATTGATTATCCAGACCAACCACCAAATATGGACGATGTC
ACCAAACTGGTCACAAATCATATGAAAAATGTTGATCACAAACCCGCTAT
TGTTGAGAATTGCCTGTACACTGTTTCTCCAGACAGAGATTTCATATTAG
ACAGACACCCAATGTATCCAAATATTGTGATCGGTACTGGATTTTCAGGA
ACTGGATTTAAAATGTCACCAATCACTGGTCAAATCCTGGCATCGTTGGC
GctcaataaaaacaccaaatacGATCTGTCAAGATTCAAAATATCAAGAT
TTGAAAATGTACTGAAAATGAAGGCGTCACTTTGATTTAACGAATATATC
GAATGTTCGattcatttattttcatttgattCGTTCtgagattcgaataa
aaatataaaatttgaacaTTTATTGTTGAGTGCTATAATACACATACTGA
TATTACTGGAAAATAATGGAAAATAAATGAACAGTGTCAATagaatgaga
aaatattttgtggAAGAGGTTTTGCCTGTGACGTCGGTTTCTGAGAACTT
AAATCTTTTCCTAggctttaaaaagaaaaaaaccctcGCGAGTAATTTAA
TTCAGCCAAGTatagaagaatatttttcatagCCCCCCTTCATAAGTATA
ATGCTGTCATAAAGAAGAGATATctgataattttaatttttagataaaat
ttggtgttttaaaattgtttcaATATTTAGCAACATTGATAGTCAGGTAG
AACAGAGGTCCAGGAACATGACAGGAATCACCTAAAAAAGCCCtaccccc
aggaagatgggaacaccctcaaatccataatggcggacgtggtacttttt
tctacaattaatcAAATAACTGGgatttttaatggttttcaaATGTCGAA
AATAACTAAACAAGGATATTCCTCTCGatgagtagataaagaaaatgggg
tcacttttgaaatttgtacCACGTGGTGCCGAGATATGAcctctaaagtc
caaaaaacaacGATTCTGATAAAGTCAACATTTTTAAGGCCCCTCGTGTA
CAATcagttttatgaaaattaacaaaaatatctcacttttctttttgctt
aaaatatGACATTTGCTGCTGTCGTTGTAGCCTGGATATCCAAGCTCAAA
ATTTTAGAAAAAACAAAATTTacctcaacatacaaagttctaaaattata
gagcttggtttccctagagaatgaaagtgcaaacccatgtttccaaaagt
ttcctagccaacccagggcaggccaaacaaaagttaataaaaggtagcct
tacaagatctaaagcCATGTAAACATCTAAGTCCATcaacaagtttgcat
gcattatcttGACCAACCACcagaccatgttttcttggaaaatgaacttg
catctgttttcttctttttcatgtttacatgtaacagaaagctctatctt
cactatcctatttttgcttcagaattgctctgcgccgtgtagattggccc
ttacggctttagcgaagtgagggtaagcaagcggactgcattctcat

Run BLAST on NCBI

transcript from alignment at sc0000778:80919..96945-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00029951 ID=TCONS_00029951|Name=TCONS_00029951|organism=Clytia hemisphaerica|type=transcript|length=16027bp|location=Sequence derived from alignment at sc0000778:80919..96945- (Clytia hemisphaerica)
GGAGAGACTTGGAAAGACAGACAAATGAAACACTTTTTATGTAAGTGAAC
TCGGTTTATGCGCAGTTATCGCCCGTGGCGCTAGATTTTCTTCTCCTGTC
GACAGACAGACAGCCCTTGTTTGTACCTTGTTTGTCATTTTAACTTTTTT
TTTCGCTAAAATTAGATTGTTCTTTTAACAAGGATTTATTATACACTGGA
TATATAAGTAACAGATTTTTGTCGATTTCTCGTGTACTAGCTATGTCCGC
AGTAATGATATTATTGTTCACTCTCCTTCCCTCATTTAATGTTTTTTCAA
AGCATTTTTATTGCATTTCTTATCGAAAACCACTCATCAAATTCCCAAAA
GGGACCTAAAACTTTCCTGTGAGAGTCAGATTCTTCCACTTAATAGCATA
CCGTAGTGATTCTAAAAATAGACACCAAAATTACTATTTGTCCGAGTTTT
AATCCCATCATCCCTTGCATTAATTGCTTTTGCAAGTCAATTACACTTAT
TGACAATACAAAAGTAATAACTTGCACGCATTACGAATCAATATGAAAAG
GATTGTGGGAATGAATTTCGGTCAAAAACCAAAAGTATTAATTATGACGT
TTGCATACCGGTGTGCTATTGATAATTATAAGTCGTTATGACGTTTCAAG
TTGTGAGAAAGATGCAAAAGACGTGTTGTGTATAAGAAATTGAATGTTGA
CACCGAAAATTTTCAAACTTCAACCTAAAAAAAACCACCTTGCCACCACG
GGCCTCCAAAGGATTTTCATACCACAGTGGAGCCAAGACACTCAAGTCTT
ATGTATGCTAATTTCAGCTCTTCTGGGGACAGTCTTGGAAAGATATTTCC
AATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAACATTTTTTTAAATCAGACATCTTCGAGCCGCCATGACAGTTGTCC
TTTGCGGACAAAGCTTGAACATCAATTGTTTTCTGAAAAAATGAAAATAC
AATGATCGCTCTCCATCGTTTTATGAGTCGTTTATCCAGTGTATAATAAA
TCTTTGCTTTTAATATAATGAGAAAATAGCAGTCCATTATGGTATCCCTT
GCTCCTTATTTTAACCATAGTCCGTATAAAAAACCCTTGTCTTGAAGGCT
TTTGTTTCTTTCCATTGTTTCTTACTTGAACTTGCGTTTGAGAAATTAGT
TTGTTTGCTTTTTGATCATGTGATTAAATCTTAAACCAATCTCAAGAGGA
ATACTTGGTAACGTGATCAAAAATTGAGCAAATCGATTTTATCTTTTGAT
ATTAACAAAGGGAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGAC
CAGAGTTTTTTATACGGACGATGTTTCAACAACAATTCTTACAGGCGCAG
AACCTTCCCTCCCTAAGAAACGTAAAAGTTTTCAGTGACTGTATTTGGAG
ACTATTTATACACGGTTTTTTAGAGGGAAACTTTTTATACTTAAACTTTA
TAGTTTCGATTCTAGGATTATGAAATGAATTGAATAGTGTATTCCCACTG
GTTTACGTAAGGATCANCCTAGGATTATGAAAGGAATTGAATAGTTTATC
CCCTCTGGTTGGGTAAGGATCAGACTCAGTGACGTGTCCGTGCGTAACAA
GGTTGGCGTGAACACGTATCACTTGCGTATAGTGAAGGACCGACTCATCA
GTTCCGTTGAACCAGAAGGATCTGACGTTGAAAGGTATCTTCTACGACTC
AACTAAATGCACTGTTTAATCGCTTGTGGTATCACTTTATACTCTCCTTT
TAGCAGAGAAATGTAAAGAGATGGAAAAACAGCTTTTCTGATTACTCAAA
GTTTAACAATCACTTCTATTGAAAATTCTATTGTAAAAACGTCGATTAGG
TCATTAACTGAAAGTCCAGAAAACACGACTCGCCATACAAATCGGACGAC
TTCTACATGATTTGACGATAAAAATAAAAATAAGCTTTTCCTTTTTTGCC
GATTACCAGTTCAATTTTTAAGAATAAGGAGCACATCTCTTATTAATTTA
TAGCAAAAGAAATTCTTAACGCAATGATATTAAATTGATTTTTGTAAAAC
TGTCAGAAATCGAGTAAAAGTCAAGATGAAGTTATAATTTACTCGAGCTC
TAGCTTTCTATATAATGAAGCGGTCATGATGCGGTTATATCAGTAGAATT
GCTAGGGAATTCTGAGCAAGTAGATATAGGTACCTTTTCGTATAGGAGAG
GTGTACCCAAGCAAATATATAAGCCCTAAAAGTTTGGGAATAATCAGGCT
TGAAACAAACGAATTTTGTCAGCAACATGCTAATAATGCAGATTTTTTAT
AGCGACAACAAAAGAAACCTCGACTTAAACTCCCTTAAGGGCAAGAGACC
TGGTATATGGTGAGCCGTTTTACCATTGTTTTTAAGAAACTGTTTTTCCA
TATCTCTTTACATTCCTCTGTTCTCTCTAAACTTCGAAATTTATTACTAC
TTTATGGTTGGATGTGTTCTAAAATCTAGGAAAAACATTTTGTCAAGATA
AACTTGTAAGATATTTGTTTTTTCAACAAAAGATTTGTTCTGAAGCTTTC
TAGGGTTACCTAGACAACAAGAATACGTTTGATGACTTGGATTATACCCC
TTTTTCGTCAGAACACATCATCATTTCTAGCTGGTTAATTTTCGAAGATC
TTATCGGAACAGATCAAAATTTCTAGCTGAAACATACTCTCAGAACACAT
CGGAAAAAAAGGTCGCCTCGCCGGCTGCTTTCGTGTTTTGTATGTTTTGC
TTATGTCTGAATAAGTCGTCTAGCATGCCAGACAAGGATAACATGCAGTC
TAATTCCAATATAATTCTTAGCAAGCTTCCAACTGTTTTTGTATTTTATC
TTGCCTAAATTATGTAATAAGACGAAAATAAAATAATGTAGTGTTTCCGA
AATGCAGGTGAAGGAAAAAAAGCTCTCATGCAGCCGCCGGCCGGAAAATA
ATTTTTTTTGCTATTTTTCATAACTTTTCGATAACTGAAATAGGAAGGTA
ACTTTTATGTACAAACAGTATAAAGTAAGCCCTGGATACTACTATATCTA
CAACTAAAGAACAAAACTTGATTTACAAGCGGGAATATCTAACCAAACGA
CGTTTGATAGCTTGAACGTTATGAGAACCATATTTATGGTGTATATGTCT
GCGGCCGGGTCAGGAAAAAAAATTTTTCACCCGGCCGGTTTCCAGAAGCA
CTACAATTTTTTATTTTCGCCTAATAACAAAACTTGTGTAACTTGACTCC
ATAAAAACCACAATAAGATGTAAGATTGCATAGAGGTCAACAAAGAGACC
TGAAAATACATTTCTACAAACAAAATAAATAACATACGGTATTTTGATAA
AGATTGATCTATTTACATTCATGAACTTTTACATTTGAAGTTTCATTTGA
TAAAATCCGAAACATCATCTTACTTACGTTACTCTGGCTTTCATTGAGTG
GAGTTTGGATGACTCTAGAGAGCTTTCTTTGGTTCTAAACTTTCAAGTGG
GATGAGAACATAGTATAAGAAAGCCGTGGCTGAAATATGTATCCCATTGT
CTTTTCAGTTATTTGCTGTTCCATCTCTGTCTCCGAGCTTTATTTTATAG
AACATTCAGATGCTCAGTTTATTATTGGTAGATAGATTTTGAAGTTTTCC
CTTATTTTCCTTGACAAAAAGTTTTTTTTTGCTAGATATCTTTGAATCTG
TACCCAATAGAACTAATTTTGGACATATTTTAGGGGTATTTTGTGGAAAC
AATAGTTTTTCGCTAAAATTGAAATTATAAGAACTATATTCAAGATGACA
ACTTTCCTGTCAGTTTAAATGTTAAATTTTGAAGGTGCTGGCTTGAAATT
TTCACAGTATTATCTTGATGTACTTATTCATTGATTTCTAAAAAGATTTC
ACTGAAACATTGTGAAGGCATTTCGAGGCACTTCATTAATTTTTGAGTTC
TTTCAGCCCAGCCATTTTGTGCTTGTTTAAATTTCTTAGTGTTGATTTTT
CCTTTACAATGATTTAATAATGCAAGTGTATTATCAAGAGCATATCATTA
ATGTCTAAAACGCACTGAGAAGTAAGTATTAACGACAAACCAATAAAATT
TACCATTAGAGATGCTACATTACTGATTTCTTGATCAACAAATAGTCATC
AAATATGACAAAAATCAGATGTTATCATTCCAGCCGCGGCTTTCTTATAC
TATGATGAGAAATTATTCGTCAAGATTGAGTTCATCAAGATAAAATTGAA
ACCGAATAATTACAGCTTGAAAAGCTCTGCCCTGCTTCATTAGCCAGTAG
AAATATTGAGCTTAAGACGAATACAATTTGATTAGTTGTTTTAGGAAGGT
GATAGAAATTGACCGTCAACCGAACATCCCTCCTCTGTTTTTCTACTTCC
TATCTCTCTATCTCCTTTTCTATTTTCTGACTTTCTGAGACTTGTTTTCT
GATTTCTACTAGCTTTTCTATGAATTTGATATTTCAAACTTTCTCCAAAT
ATCGACCCGGCCGGGATTCGAACCACCAAATGATAGAAACTCTGATCAGA
AACCCAGCGCGCTATCCGTTGAGCCACACTCGCACAGCAGAATACAAAAT
TTGTAAATACTTATAGAATGACAAAAAAGACGGGGGTAATGTTATTATAA
TATGGGTGAAAGTACCCCTTTTTTAACCTGACTGAAATTCGAGCCGTTAC
TAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACAGTGAC
AAGCCGTTACTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAAAAACCATGTTCGACTGACGGTCAAT
TTTTATCATCTTCCGTTGTTTTACGGGTCCGACCGATCCTGAATTTTCAA
AATCGACGTAAAAATAAAATTGATTTTGGTGGTACATTTTTATTTTCATT
GCTTTATTACAGACTACCAAATGTTCAAAGTTTTCTCGTATTTCCAAGGT
TTTAAGAATTTTCTTTTCCGTTTTTCATTTTATCCATGAATTCGAGCTTG
TTGTGTCTTTTTATTTTCTATATCGCATTTTTGTCAAGATGTAGTAGTTT
TTGCTTCCTTTTTATGAGATTTCGTAGGTGAAATTACCTACTACCACTAC
TACCGACCGACCGACCGACCCTCTTCTTTGGGTAGCTTGGCCAGTAAAAC
AACAAAATTAAACTGGCCTCGTCTAATAAGTGATAATACAGAATCGTCTA
CTTTTAAATAACTACCAATAGACAATAGTGATTCATCTCTTTACATTCTA
CTCCTCCAAATAATTTTTCTATAAAATTTGTCCACCTTCAAATCAAAATG
AGATTTTAGGTTAATATTCCATGAAGACATAATATCCCGAGAAAAGTTAA
AGTTAATAGCAATTACAGATGAGCTAACGAAGCTTTTATATTTTAGAGCA
CAATCTTTTTATTTGTGAAGGGCTATTGGGGTAATCTGTTAAGCAACCCC
TTCTCACAGACCCACAGGGCCTCTACTCACTGGAACAAATAGCCATAAAC
AACATGGGAAGGGAATGTCAATATCCTTCGAGTTTCAGTCCGTTATTTTT
GCCCCACTTGCTGAGAAAATTCTACCGGGTCTGTGTGAAGGGGGCGTTGT
TAAGGCTTACAAAACACAAATCCTAACACAGCTTTTAACGCAAAACCACA
AAACCACAAAACCAAAACCACAAAAGAAACCGGTAATTTAGAATACACTA
TATCTCAGATAAATGCGTAGTAAAAGATGTCAACCTTTGATGTCATCGTC
ATCGGAGCAGGAATAAATGGAAGTGCAACCGCCTATGATCTAAGAAATAA
ACAACACAAAAATGTGCTTCTTCTAGAACAAGTAAGTCAATGAGTTTGAA
GAAGTTTAAAGTTTAGTGATATTTTCTACAGGGTTTAGTTAACCACCATG
AACATGATAGCAGAAAAAACAAAAGCACGTTATACCCCTGTCTCAATAAC
CCGGTGAGATTTGTAAAACTGGCAAGTCGAGAAAGGAGAATGAAAGGACT
TTAATACCATATCCGGAAAAGGGTGTAGGGAGAGCGAAGCCCTCTTGTAA
CGCCCAGCTTAATTTGAGACTCCCATTTTTTGTCAAGTTTGAACAATTGC
ATTTGGTCGGCTGCGTGGATCTGACTGCTTTAAAAAGTAAGGTAGAAAAT
TCTAACATTATTGTCTTTATTTTAGTTTCCTCTTCCTCACACTCGAGGAA
GCTCACATGGTCAGACGAGGGTCATAAGATGTTTATATCACAAGAGGATT
TATTCCCAGATGACCATGGACTCGTTTCCCATATGGAGAGACTTGGAAAG
ACAGACAAATGAAACACTTTTTATGTAAGTGAACTCGGTTTATGCGCCGA
CCTTTTTTAGGACGTAGGGTTAGATATTGATGGTTTCGATTGTTTTTTAT
TCATAGCACCACAAACACTAAAAGGTTCCAAGCCCTCCCACAACGGTGTG
ACATCAAAAGTATCTAATGAAAAAGTAGATCTAGCGCCCTCGATACATAT
ACATCACTATCAATTAGTGCTACCATCAGGGAACCATTATTAAAAAACTC
CAATCAAAGATTTTGGGGTTGGTCTAAAAAGCAGGGTAAATTGGCTACTC
CAATCGAGCTAGGTTGTGAGGTACCCCTTTTTGCCTAAATATTTGAAGCC
TACTAATCTTTTGTGAAAATACAATATTAGAACCTTTTGTCATTTAAAGA
AATCAGGTTTAAATTTGTTACGTAACCCTAGTTACTGTAGTCATTTTTTG
TAAAAATTACTAAAAATATACTTCTGTTTACTGACTTTTTGACAAATAAC
GAGATTGCTCACGGGAATTTTTTGACCCGCATCCCGCGCGATCGTATTCA
ATCACCCGCGCACATACGCTCTGTCTGCTGTTTATGAGTACTGTATGCAA
GAACAAGCTCCTCTCTTCAGTCTTTTAAGACTTTAAAGGATATTGGAGAG
TGTCCTAACCCCTCAGATGGAAATTTCTAATTTCATAGTTACTAGCAAGC
TTTACAGCCCGTTTGCTGCAGTCCTCTACTTACTGAATTGGAATAAGAGT
CGAGTCACTCGACAACTAAAAAAGTCCTGAAAATCTCGATGAGTGCGATC
GGCTCTCGCATGTTGGAAATAATCTAAAATAATTTCTTTAATTAATACCT
TGACAGGGTGAAATTATACAGGTTGTAAAGCAAAACTGACTGAATGATTC
TGCTAAAAAATGATTGACAGGTGCGGGTTTGCTCGCGCGGGTTAGAAATT
CCCGTGAGCAATCTCGTTATTTATCAGAATGTGTTTACTGAGTGCGGTCA
CCATCTTGTCTTCCTTCTTCTCACACTTTGAAAATCTAAAGACCAAACTC
TTTTTAAGGTTAAAAGTAGAGATCCGTCCCTAACATTCTAACAGAGACTC
AAAATGAAAATCAGAACAATGGGTAATCTCATAATATCAAAGGATAATTT
ACCTATCATAAATGAATAATTAGAATAATTTTTTCAAACTTTTTCCCTCT
GCCTCTAATGAGGACTATCATCTAAAAAGATTTTATTTTTTTACTCTGGT
CTACGAAANAAAAGTTTTTCCCTCTGCCTCTAATGAGGACTATCATCTAA
AAAGATTTTATTTTTTTACTCTGGTCTACGAAATATATGGCTACCCCACA
ACCTAGCCCAATTGGCTACCCCGATTGGCTACCCTGCTTTTTAAAACCAA
CCTAAGAACCAAGATTTTGTTTGGTCGAGATGAAGAAAACTTCCTCCAGG
CTTTATATATATAGACAATATTCAGCGATATTTATTTTTATGTAAATCCA
AGTTAGACCTACATATATAATGTTGAAATTTCCAGTTGAAATTTTGAAAA
TATTGAATAAAATCTTCACTTAAGGGATTCATTTTCAACTGTTATTTTAT
TTCCAACAGCCAAAATGGTATGCTTGAAGTATATGACAACACGACAGATT
CGGAAAAGTTGAACCTAAGTAAGAAAGTTTTGAATGACCTCAATGTGCCA
TATAAAGTGCTCAACACAGAAGAAATCAATCGAAAATATAAACCATTTCA
TTTTGAAGGTGATTATTCAGCAATTTTCGAGTCCCTAGGTGGAACTCTCA
TGGCTAATAAATGTCTTCAAGCTTTTCAGGTAACTGTAAATCTTTTCTTT
AAATATGATTTTAATTTGACTGAAATTGACAATTAGTTGAAATGAGATCC
ACCTATTCCGAGTGATTGTTCACAGTCGATGATGGCTAACTGATCATCCT
CTGATCCACCTACCAGCATAGCCAGAAAATTTTACTTTCTCGAGGTTTTT
AAAACAATCAAAATACGAGCACAGAAAACTATGCTAGGTTGGGGATAAAA
TCCGTTGCTGAAGCTATTGCCATCATATAAATCAGAATGATTTGATTAAG
CAAACGGGTTGTCGGGCTAACTTTTATAGCAATTCATTGGACTAATTTTT
CTTCCTAACAATAATAAATTCAAATTTGTTTTAGACATTGTATAAGGAAG
CTGGTGGAGTTCTCCATGACAACGAGCAAGTCAAACAAATCATCCCTGGC
AACGATCTAGTCACCGTTGTAACCAATAAATCACAATTCAAAGCTAAATC
TTTGGTCATCACTGCAGGTAAGTAATGTTTTTCATCGAAAAGGTCAGATA
ACATAAAAATCTACAATAATACAAATCAACACGAGCCCTACTAGCTGTTT
TTATAGGAATGTACAGTAGTCTATCAGAATATTACGAAATTGACCAGAAA
ACTCATGACACCAAGGCAACTAAACTTATTATTGCCACTTTTAGAGTATT
TTTTACCTTCAAACTGAATACAGTTAAGGATAATGTTCACCCAAAAAGTA
ATCCATGATCAAATGGAAAAAAAAACAGCATTTAAAAAAAGTGATCTCAA
TTTGAATAGATAGCTCCCCCAGCTATTGAAATCATGACCGTCTGGAAATT
TCAATTCCAAAACAAACCAATTTTACTTGAATTTTACACAGGATCTTTCG
TGGCAAAATTATTAAAGCCATTACATTTGGATTTGCCATTGACGGTATGT
AATTATTTGTGAAATATTGATCTATAGGCAACACAAATATAATATGGTTA
AAGGTCTTGTTTTGACGGAAAGATCTGACGATGCAGAGTCGGCAATATTT
CAGATCTAGCTGGATAAATTTCGATCGACAATTCGCCAAATTTCTTTTCA
AATCATTTCAAAGATTTCTTTTGATTAAACTTAGATTCAGAGAAACCATT
TATGTTTTTGGAGAGTCCACAATGACGGTGAGGGGACACTGGAAGCAGGA
TTCCCATCGTTTAAAACACCGTATCTCACTTATGGTACTGCTTCTATCGA
GTATCCTGGTTTATTGAAGGTATAACGATGATTATCAGCTGGTCTTAACT
GCAAATATACTTTGATTGATTTGATTGTCCAATGCAATTCAATTCACGTC
AAGTTTCTTCAAACTTACTCATTTTTTGAAAGAGGAATTTGTTTTTATTC
CATTTATTCCATTAGAGTATTAGATGCAATTTTAAATACTTCCTTTAAGG
CTTACAATAAAGAAACAAATTTAAGTTAAAAATCGTGGTGACAAAATATT
TTAGCAATTTCTTCGTCATCTAAAAATTATTGACGTCAATACAAAACTTC
CATCTCTCGGTAAAAAGCCTATCCAAATGTATGGTTTACAAGATTTTTCA
ATAACATTTAAGATATGCTCTCATGGAGGACCTACCGTTGATATTGATTA
TCCAGACCAACCACCAAATATGGACGATGTCACCAAACTGGTCACAAATC
ATATGAAAAATGTTGATCACAAACCCGCTATTGTTGAGAATTGCCTGTAC
ACTGTAAGTTAATTGAGCACAAAAACTAAACATGAATAAGAGCTTACTCT
AAGGTCCCAAATTATTCGGGACCAATTTTCGGACCACCTATTCAGTGGCG
ACCTGGCAGGGGCTGCAGGGTGTACAGTGCACCACCCAGAAAGATCTGAG
AGGGGCGTCAAAAGAGCTTTTCAAGGGGGCGCCAAAATTTTTTTGATGTT
TAATTGGGCGATTTGGTGCCCTTCGGCACGTTTATAGCGCGCCTTCTATA
AATGCAATGTTGTTTTTTTTCACCTGCGGCGCTTCTTTTTAGTTTACGCT
CTTGCATCCTTTCTCTTGAATTTTTTCATAAAACTACTATCAACATTGAA
TCGCGAAAAGTCAAAGCAAGAGAGAAGTGTTGTGTATCCACCAGGGGTTA
AAGAGGATGCTCACCCCCAAAATGAGAGATGGCCAAAAAGATCGAAACTT
GACGATGCTCGCTGTGGTTTTTATGGTCTTATGATGAATAACTTTCTCCT
TTTTAGAAGATTTTTTAAGCTGCTTGACCTTTCTTACACCTAAATTTTTT
GCCTGTGGCGCCAAAATTACAAAGAACCCTCATTCCTGCCAATTTTGGAG
CCTCTTTCAGCCATTGACCTTTCAAGGAGAGTAAAGTAAGACCAACGGCG
CAAAAGTTTAAAGATTATCTGGTAATTTTTCTGATAAAGTTTTAGAAAAC
AAAAGTATAGACCGATCGAGTGGTATAAAATTTCCATTTCAAGTATCAAC
AGCTCATGTTTTTCTTATTTGAGGAGCTTTATTTTTGGTGTTAAATCGGT
ATAAATTTGGGCATTTTTAGACATTTTAAAAGTTGAAAATTGAAAAATGT
TCTTACAATTATAACAAGGAAATATTATCAAGTTATTAAATAAAAGTTTT
TTAACTCAAAGATTCCGGGCGTTACTTTCAACCAGTCACTGCTCTTGAAC
CCCTGCAGTTTAATATTCTCACTTAATGATGGAGGGCGCAAATAAGGACA
AAAATACCAGGGCGCCAATTTCATAGTTTGCACCACCAAGGAAATTTAGC
CAGGTCGCTACTACCCCTATTATCATAGTAGGGGGTCCAAAAATTGTTTT
AAAACATATTGAACAAGTCCTACAATCATGGACAACAGGTTGTATACTTT
ACAAAAATCCATGAAAAAAGCTCTTAAAACACATTTTTACCAGTGCCAAT
GTTGTTTTATTGGATTTAGAGATAACGGATGAAAAATTTAGAAGCTGAAT
CCACTACATTGAAGGAAATGATTTTTTGCGAAGTTTTCAGGCCATTTTTT
TCTTAGATTAAAGATTCAATGAGTTTTCCCCTTCATCTTTTTAGAAGACA
ATACGACCATATTTATAAAGCTTCGTTTAAAAATAAACTTTTCACAGCTC
TCTGGCGCATCCGCCACTTGTGTGGGGCCAGGTTCACTTATTTTCAGTCA
TTTTTCAGTCATGATGTCATAAGGACTAAAGGCAAGCCTGTTGATATTCT
TCTTCCAAATACCCACTTGTCGTTCATTTGGGGAGTTTTTCAAGTGCGAA
AATGTTGTTTTCGTCACATTTAGGGTCCACGATTGTACGGGGTTTATGAT
TTCCGAAATACCGAATAATTTTGCCGAAATTTCCGAAATTCCGTAAAAAA
ATACTTGCAATTCTGATACCGATTTTTTTGGGTATTTGTCATCGTTTTGA
CTAAGTTTTCATCAATTTAGATTTTTCATGTATGAATTCCGAAAAAAGGG
GATAAAAACTTTATTATACCGAAATTTCGAAGCAAAAATTCATTGATTTC
CGATACCGAAACAATTTCAGAATTCCAAAATACGGAAGGAATTTTGCCTG
AATTCCGAAAATCCGATGAAAAATGGTCTATTTCCAAAAAACCGTACGCC
CCCGCCTTAAAGTACAATGAAAGGCTGTTTTCAATGGCCAGTCACAGCCG
CACATTTTTTACATCCTACGTTCACAAAGAATATAATTTTCAATTAAATA
GTCTCATTTTTATCCCAAAACATTGGTTGGCGAAACGTTTTGAAAAAGGG
CTTTAAAAGTAATCAATAGTCAAAAATAAAATAATTTTGAGTTGGGAGTA
TTTAGCCAAATTGTGTAGGTTTCCAATTTTCAAATTATTCGAAAATGATT
GTTCTATATTTTCAGGTTTCTCCAGACAGAGATTTCATATTAGACAGACA
CCCAATGTATCCAAATATTGTGATCGGTACTGGATTTTCAGGTAAAAACA
TTCCCTCTGATATTCTCCAAAGAGGTTTGCGTGATGGAGCGATTTAATCT
TTTTTTGCCACCGGAGGAAGCCTAAAGCTTCTGAGGATGGCATTCATAGC
TTCACGCATAAGGAAGTTGGGCAAACATCTCATAATTTTGCGCGCGTTTT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAGACTTTTCCGGAGTTATTTTGATCTGATTACTCAT
TTTGAAATGTCAGTTTGTCTTTTTCTTATCCCTGGAGAGTTAAATGAATC
TAAGGAAATTCCCTTTTCTTGGAAATTCCTTTTATACCACAAGTAGTTAT
TTAGCGCTCTTCATAGGTTAAAAATATTACTCTACTCAAAGTATTCAAAC
AGTTATCTTGCTAAACGTGTACATTAGTAAAATGACATATGAAGAGCAGT
ATCTTCAGATATATACGCTTTTTATAGGAAAAACCAGTAAGTCATATGAT
TCTGGCTGGGCTGCTCTTAAATTTATATGAGTTTTTCAGCCTTAAATGTC
AATATTAATTAAAATGGAAACATGTACTTCTCTGTAATTTCTGAAATCTG
AGGTTCAGATTCTTCTTAATTTGTTCTTAGGTTTTGGACAAATTTCAGCC
TCGTATTCTTATGAAATTGTTCTTATAAAAAACGTGTAAGACAAGGCACA
GATGTCACTCTAAGTCGACTGTAAATCACTCCCTTGACACATTTGTTAGC
ATTTGAAAGAATTTTGTCTCAGATGAGAGGTCACTCTTAACAAAAATTAC
TGTAGGGCTAAGATCATTCCTCTTGAACGCAAATTCAACTCTATGTGTTC
GTTTTGCTGCGGTGGCACCTTAATGAAAGTTATGGCTAGTCTAGAGTGTA
ATTGCTAATAATTTTTTGACATGATGGTGCAATGGTTTTGGCGTGCTGCG
TTACATGGTGAAGATTTGAGTCGTGATGAGTGACTTGGGTCAATCTTTCG
CTATTTTATACACGATGGCCAATTTTGATAATTTTCGTGTGCGTGATAAA
AACAAAATTTCATAAAAAGCCGCTCGAAACATCTTAAACCACATAGTTCT
TTGATTTCATACTTTCTTGTTTTCAAAATTCATCGAACGTTAGGGTTACT
GCTTTCTCGGGTTAAGCTTTTATTTTTAAACCAGTCACGCAACTTATTTT
GAAAATCTAAGTAGCTTTGCCTAGCAAGACCACAATTCACCTGACGTGGG
TAATCGGATGTCTTGAATATGTCTCTACAAAAAATCATTATAGCCAGCTC
TCTGCAAATCTGATGTCTAAAATTGCATGGATAAACATAACTTTAGATAG
AACTTTGTTTGTTTCCTTCCAATTTCAGGAACTGGATTTAAAATGTCACC
AATCACTGGTCAAATCCTGGCATCGTTGGCGCTCAATAAAAACACCAAAT
ACGATCTGTCAAGATTCAAAATATCAAGATTTGAAAATGTACTGAAAATG
AAGGCGTCACTTTGATTTAACGAATATATCGAATGTTCGATTCATTTATT
TTCATTTGATTCGTTCTGAGATTCGAATAAAAATATAAAATTTGAACATT
TATTGTTGAGTGCTATAATACACATACTGATATTACTGGAAAATAATGGA
AAATAAATGAACAGTGTCAATAGAATGAGAAAATATTTTGTGGAAGAGGT
TTTGCCTGTGACGTCGGTTTCTGAGAACTTAAATCTTTTCCTAGGCTTTA
AAAAGAAAAAAACCCTCGCGAGTAATTTAATTCAGCCAAGTATAGAAGAA
TATTTTTCATAGCCCCCCTTCATAAGTATAATGCTGTCATAAAGAAGAGA
TATCTGATAATTTTAATTTTTAGATAAAATTTGGTGTTTTAAAATTGTTT
CAATATTTAGCAACATTGATAGTCAGGTAGAACAGAGGTCCAGGAACATG
ACAGGAATCACCTAAAAAAGCCCTACCCCCAGGAAGATGGGAACACCCTC
AAATCCATAATGGCGGACGTGGTACTTTTTTCTACAATTAATCAAATAAC
TGGGATTTTTAATGGTTTTCAAATGTCGAAAATAACTAAACAAGGATATT
CCTCTCGATGAGTAGATAAAGAAAATGGGGTCACTTTTGAAATTTGTACC
ACGTGGTGCCGAGATATGACCTCTAAAGTCCAAAAAACAACGATTCTGAT
AAAGTCAACATTTTTAAGGCCCCTCGTGTACAATCAGTTTTATGAAAATT
AACAAAAATATCTCACTTTTCTTTTTGCTTAAAATATGACATTTGCTGCT
GTCGTTGTAGCCTGGATATCCAAGCTCAAAATTTTAGAAAAAACAAAATT
TACCTCAACATACAAAGTTCTAAAATTATAGAGCTTGGTTTCCCTAGAGA
ATGAAAGTGCAAACCCATGTTTCCAAAAGTTTCCTAGCCAACCCAGGGCA
GGCCAAACAAAAGTTAATAAAAGGTAGCCTTACAAGATCTAAAGCCATGT
AAACATCTAAGTCCATCAACAAGTTTGCATGCATTATCTTGACCAACCAC
CAGACCATGTTTTCTTGGAAAATGAACTTGCATCTGTTTTCTTCTTTTTC
ATGTTTACATGTAACAGAAAGCTCTATCTTCACTATCCTATTTTTGCTTC
AGAATTGCTCTGCGCCGTGTAGATTGGCCCTTACGGCTTTAGCGAAGTGA
GGGTAAGCAAGCGGACTGCATTCTCAT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_017111	XLOC_017111	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000778	supercontig	sc0000778:80919..96945 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.635795	0.510063	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00029951 vs. Swiss-Prot (Human)
Match: SOX (Peroxisomal sarcosine oxidase OS=Homo sapiens GN=PIPOX PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 2.182e-54
Identity = 114/314 (36.31%), Postives = 181/314 (57.64%), Query Frame = 3

Query:    6 DLERQTNETLFIQNGMLEVYDNTTDSEKLNLSKKVLNDLNVPYKVLNTEEINRKYKPFHFEGDYSAIFESLGGTLMANKCLQAFQTLYKEAGGVLHDNEQVKQIIPGNDLVTVVTNKSQFKAKSLVITAGSFVAXXXXXXXXXXXXTIQRNHLCFWRVHNDGEGTLEAGFPSFK----TPYLTYGTASIEYPGLLKICSHGGPTVDIDYPDQPPNMDDV------TKLVTNHMKNVDHKPAIVENCLYTVSPDRDFILDRHPMYPNIVIGTGFSGTGFKMSPITGQILASLALNKNTKYDLSRFKISRFENVLK 917
             LE +    L  Q G+L +     ++++L   +  L+   V ++ L++EE+ +++           + ++ GG + A K L+A Q   ++ GG++ D E+V +I PG  LVTV T    ++AKSLVITAG +  +LL+PL +++PL   R ++C+WR    G   +   FP F      P+  YG  + EYPGL+K+  H G   D +  D P    D+      +  V +H+ ++  +PA++E+C+YT +PD  FILDRHP Y NIVIG GFSG GFK++P+ G+IL  L++     YDL+ F+ISRF ++ K
Sbjct:   77 QLEHEAGTQLHRQTGLLLL--GMKENQELKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAIRQLGGIVRDGEKVVEINPGL-LVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQTLRINVCYWREMVPGSYGVSQAFPCFLWLGLCPHHIYGLPTGEYPGLMKVSYHHGNHADPEERDCPTARTDIGDVQILSSFVRDHLPDLKPEPAVIESCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRFPSLGK 387

The following BLAST results are available for this feature:

BLAST of TCONS_00029951 vs. Swiss-Prot (Human)

BLAST of TCONS_00029951 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SOX	2.182e-54	36.31	Peroxisomal sarcosine oxidase OS=Homo sapiens GN=P...	[more]

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TCONS_00029951 (transcript) - C. hemisphaerica