TCONS_00029987 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029987
Unique NameTCONS_00029987
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3632

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029987 ID=TCONS_00029987|Name=TCONS_00029987|organism=Clytia hemisphaerica|type=transcript|length=3632bp
GCAGAAATCGTCGAGATCTCGGGGGCAGAAGCTTACCTTCTCCAAGGGCA
GGGTCAGAAAAACTTGCTCCATGCCCTTCCAGGGGCAGAGCAATCCTTTG
CCATGGGCACTATGATCCAACTTTCACCGTTTCAGGAGTGAAATTAAAAT
CTAGCCTTCCTGCTGCCGCCATCTTTACGATTATCGCTAGCTTCTGAAAT
AAACTTTTACGGAAACGAGAATCTTTATTTGCACCCGTTTTCCGCCCCAT
CCCGCCcccgtcaaataaaaaaacgcCCCTGTATACCACTGCTGAATTTC
TCAATCGCGGTACCAAAACATTTAACGCGCgcgttgcaaaaaaaaattac
aaattcaaaatggcggagaAACGTGCTttccttgatcctattcttgACAT
CGGTGAAAATGAGTGTGTTGTTTGTAAAGGAAAAGTAGGAAGCTGTCATA
AGTCAGTTTGTGATAATTATGTCCATGCTTTTTGTGGAACAaacaatgaa
gatgaagaagggtTTGAGGCACCCAATGTCTGTTTTAACTGTTCACCAAC
AACTGTCAATAATGCCATGGATAAAAATGATGAACATCAAGTTGTGACTG
TCGAAGATAATGACCACTCTGATAATGAAAACGATAACAGTAGTAACAGT
GATAAAACTAAcactaaagataagaaaaaaagaaaactatcTTCAAGCTC
AGTAAATAAAACAGGTGCTTGGAACTTCTTCAACAACAATGCAAGTGACC
CTGCTCCTAAACCAAAAAAGTCCAAGTCAAGTGATGGCAATACCAAGAAA
TATTATTGTCTCAAATGTTGTGCAGAACTTACCTGGGGTACAGACTCACA
TAAAAAGCGACATCTCCAGCAGAAacataaagatgaaaatgaaatggatG
CTTTGCATTCCATTGTAGAGTTTGACCATGAGCTAGCAGTCAAGAGAAGA
AATGCAGGCTTAAAAGAAAAAGCATCAAAAGCATCAGATGATTCATCCAT
GCTATCTAATAAACCAGAGAATACAACAGATTCAGGAGATGAAATTCTTT
CCTCAACACTAAACAATGACATTTCAGCATCAGACCAGACTTTTGATGGT
GAAACATCTTTCTCTACAACTCCAGAGCCAGTGGGGCAAGAAGAAGAAGC
TACTCCTAAAACATCTAATGCGCTACATGAATCTTCTTCGTCAAACGTAC
AGGCTTCTTTAGACCGATTTATGAAACCGAAAGCTCCAACAGATCCTTTG
ATGAGTGAGTTAGCTCAAATAAAATCTATGCTATCAGAGCTTACTTTAAA
CCGTTCTTCAAACAATCTTTCGAAACCAACATATGGTAACGACAGCACGA
AGAAAGATAGTATGAAGGAAGCTAACAATTTGCTTGATCTTTCGCTGAAT
GCGGATTTGAAAGTAGAAATGAAAGATGATGGTGGATGTTTTGTCCAATG
CTTGACTTGTAATTACTTTCTACAATCTTCCAAAACAAAATCCGCTTCAT
CTTGCTGCTCCATCAACCTTGGCAATGGAATCCACTACAATAAATTTAAA
ACGTCAGACCTGGTGGCTGGAACGAAGGCTGAAAATTGCCAACCATGGTA
CAGCTTTAAGAATTATATACTGGCCCACTTCAACTTTCCGGGAGACAAAG
GAGAAGGGGTTTTGCATTTCAAAGCCAAGCAGTTCGAAATCAAAGACCGT
CGAAAAAAAAGCTTACAAATGGAAGTGACAAAAAATGTAAAACCTATTTC
CTGATATCATTGATGCGGCTTACCATTACGTCATGAAACAAACGATAGAA
TTTTTGCAAACACCGTTGTTGTGTACAGGACTCTGTCCACACATAGCTGT
TGCCTCGGACAAGTCTACCCCTGGTCGCGAGACAAATCACGCCATAATGA
TCATCATACCATTTAACGGCAAACGCATTCCGATGCCTATCGATGCTCCT
TTGGTTTACGAGATGAACGATGAAAACAATTTAGAAGGTGGAAGTGGAGA
AGATCTAGCTTACCAAATTACAGATGTTCTGAAAAAGAGGCTTAAGATCG
ACGAAGAAAAAATTCATTACATCAGAGCATTCCATGCTGATGGACAATAC
CAATGCGATACGTTTCAAAGCAGGTTCAAGTCTAACTTCCAATCGCCAGT
CAAGGAAATTGATCCGTTTGTTCTATTACCGTGGGATACATCACACTGGA
TGGACCTTGCTATGGAAAAACTGTATGAGGATAGCCTTTCTTCGAGCTTC
TtgaaacagttagtcacacggGCCAATCGTTTTAATACAATGTTTCGACA
TGGGAAAGGGCACGAGGAATACAAGGGGTTAGCAGATTCACTTGGTTTGA
AGTCGTTAGAGGTTGTTGGGTATTCAACTACAAGGTTTTTCTCCTCCTCA
TATGAACAGTGGGATAAAATCTATCATTCTTACCCGGCACTcatcgaaac
ttataaaaagtTCAGAGAACAAGGTGATAATTGCGACGAAACAAGATACC
AGATCCGCGGGCAAGATTTTGCTATCGACATCTGTGGCGCAGCTGATGTT
CTAAGACCAATCGTCTTGATGATGGTACGCTGCCAAGCAGTTGATTTACC
TCTGTGGAAAGTACCGACCTGGTTTCACAGAATGATCCGTCAGCTTGAGT
CAACAGCAGAAGAAGTGAAGAAGAGGGAAGGATTCTGCTCTTCACTCAAC
TTGACCTACCTTggtgaaaattggaaatctttgACCGCGAACGAAAAGAA
CAAGAGGAGTGAAAAGTTGGGGACATTCAAGAATGTAGATGTAATTAAAG
GCTGGTTAGTTACAGACAAAGGAACTGTCGAATCTGAAGCAGCTGATACG
AAGAAAACCAAGAAGAAACAATATACTTGGAAGTATCGGAGCTCAGAAGA
GTGTCTGTCGGATCTTGTCACTCTGGCAAAAGAAGCGAAAACCCTAATAT
CAACGAGGTTCGATTCGTCAGTTGACCAAGAGGTTAAAGATCTAGCCGTT
ATTTTTGATCTCGAAAATACGGTTCTCCTACTTAAAGATTTTAAACGTGT
GGGGAATAAGTTGAAAGCAAAGCGCAAAGATATCACAAAATTTGAAACTA
ATGGTGCAAAGGAGTTCGAAAGTTTTTACAAACACGTTTGTCAACTACCT
CAAGTAGAAAGCATGTACGAAAAGGACTCTAATCTTGATTTGCTCCCACA
TCATGCCTCaagtgttttgaaaaaataccgATCCAGTATAAAATCCATGG
TATTTGAGACCCACACAAAAGATCTATTCACTACACCGAAAGGAGAGAAG
TTGAAGAATGTTTCCCAGTCACAGTTGGTCGAAATTAAGCCGTCAAAGGA
ACGAGATTTGACCCAGCTTTTTACTTTAACCTTTGAAAACGGAATATCTG
AGGAAGCCATCGTTGCCGAAAGCAAGTTTGCTGAGTTGCTATATACAAAC
GAGGCTGTTTATACTTCTTTTGGAAAGGAAGTCCGCATTGCCTTGGACGT
TGCCCTCAGATCAGGTGGCTGTGAAGCTATAGTCGAGGGTTTCTATAGCT
TGGtcaaaagaaacataaaaagaACGGTCGTCAAAGAAATAAAACTCTAA
CTCAAAGAGCTATAGTGGATTGGTGTTTGCCC
Run BLAST on NCBI

protein sequence of TCONS_00029987-protein

>TCONS_00029987-protein ID=TCONS_00029987-protein|Name=TCONS_00029987-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MKQTIEFLQTPLLCTGLCPHIAVASDKSTPGRETNHAIMIIIPFNGKRIP
MPIDAPLVYEMNDENNLEGGSGEDLAYQITDVLKKRLKIDEEKIHYIRAF
HADGQYQCDTFQSRFKSNFQSPVKEIDPFVLLPWDTSHWMDLAMEKLYED
SLSSSFLKQLVTRANRFNTMFRHGKGHEEYKGLADSLGLKSLEVVGYSTT
RFFSSSYEQWDKIYHSYPALIETYKKFREQGDNCDETRYQIRGQDFAIDI
CGAADVLRPIVLMMVRCQAVDLPLWKVPTWFHRMIRQLESTAEEVKKREG
FCSSLNLTYLGENWKSLTANEKNKRSEKLGTFKNVDVIKGWLVTDKGTVE
SEAADTKKTKKKQYTWKYRSSEECLSDLVTLAKEAKTLISTRFDSSVDQE
VKDLAVIFDLENTVLLLKDFKRVGNKLKAKRKDITKFETNGAKEFESFYK
HVCQLPQVESMYEKDSNLDLLPHHASSVLKKYRSSIKSMVFETHTKDLFT
TPKGEKLKNVSQSQLVEIKPSKERDLTQLFTLTFENGISEEAIVAESKFA
ELLYTNEAVYTSFGKEVRIALDVALRSGGCEAIVEGFYSLVKRNIKRTVV
KEIKL
Run BLAST on NCBI

transcript from alignment at sc0000781:29274..35034+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029987 ID=TCONS_00029987|Name=TCONS_00029987|organism=Clytia hemisphaerica|type=transcript|length=5761bp|location=Sequence derived from alignment at sc0000781:29274..35034+ (Clytia hemisphaerica)
GCAGAAATCGTCGAGATCTCGGGGGCAGAAGCTTACCTTCTCCAAGGGCA
GGGTCAGAAAAACTTGCTCCATGCCCTTCCAGGGGCAGAGCAATCCTTTG
CCATGGGCACTATGATCCAACTTTCACCGTTTCAGGAGTGAAATTAAAAT
CTAGCCTTCCTGCTGCCGCCATCTTTACGATTATCGCTAGCTTCTGAAAT
AAACTTTTACGGAAACGAGAATCTTTATTTGCACCCGTTTTCCGCCCCAT
CCCGCCcccgtcaaataaaaaaacgcCCCTGTATACCACTGCTGAATTTC
TCAATCGCGGTACCAAAACATTTAACGCGCgcgttgcaaaaaaaaattac
aaattcaaaatggcggagaAACGTGCTttccttgatcctattcttgACAT
CGGTGAAAATGAGTGTGTTGTTTGTAAAGGAAAAGTAGGAAGCTGTCATA
AGTCAGTTTGTGATAATTATGTCCATGCTTTTTGTGGAACAaacaatgaa
gatgaagaagggtTTGAGGCACCCAATGTCTGTTTTAACTGTTCACCAAC
AACTGTCAATAATGCCATGGATAAAAATGATGAACATCAAGTTGTGACTG
TCGAAGATAATGACCACTCTGATAATGAAAACGATAACAGTAGTAACAGT
GATAAAACTAAcactaaagataagaaaaaaagaaaactatcTTCAAGCTC
AGTAAATAAAACAGGTAtttatatttacttttttttggtcATGTTTTTGG
TCTCTAGTTTGGTTATAAACCTCATTATACTTACCTTTAGGTGCTTGGAA
CTTCTTCAACAACAATGCAAGTGACCCTGCTCCTAAACCAAAAAAGTCCA
AGTCAAGTGATGGCAATACCAAGAAATATTATTGTCTCAAATGTTGTGCA
GAACTTACCTGGGGTACAGACTCACATAAAAAGCGACATCTCCAGCAGAA
acataaagatgaaaatgaaatggatGCTTTGCATTCCATTGTAGAGTTTG
ACCATGAGCTAGCAGTCAAGAGAAGAAATGCAGGCTTAAAAGAAAAAGCA
TCAAAAGCATCAGATGATTCATCCATGCTATCTAATAAACCAGAGAATAC
AACAGATTCAGGTACAAAAATTTCGTTGTACTTCATATTTTGCCAAATAT
AATTCagcaaaagaaaatttctaatGAAATGTGAATATTAAAAAATCTAT
AATACCGATTTCTGAGTCATTTAGGTCAGATTAGATTAGTACTAGTTTGT
TATAAAATGCACTGGTTTTCTCCATTAGAAATTGtgatttgttgttttgt
gtttttgaagTATTCATTTCTTCCTTGTTTGATTAGACTTGGTTGTGTTA
CTTTGTCAAACTTTTTACTTAATTTGTAGGAGATGAAATTCTTTCCTCAA
CACTAAACAATGACATTTCAGCATCAGACCAGACTTTTGATGGTAAATAT
gatatttgaaattgaaatcatTTGGGTTATAATGTGTACTCAGAAAAGAT
TCgaactttattttgaaatgactaGTTTTTCCTCCTATCAGATAGTGTTG
TAAGTCTCTTTGACATGATATGTGTgtttcatatcttaaagatttTAAAC
AAATTCCTTTATTTCTAGGTGAAACATCTTTCTCTACAACTCCAGAGCCA
GTGGGGCAAGAAGAAGAAGCTACTCCTAAAACATCTAATGCGCTACATGA
ATCTTCTTCGTCAAACGTACAGGCTTCTTTAGACCGATTTATGAAACCGA
AAGCTCCAACAGATCCTTTGATGAGTGAGTTAGCTCAAATAAAATCTATG
CTATCAGAGCTTACTTTAAACCGTTCTTCAAACAATCTTTCGAAACCAAC
ATATGGTAACGACAGCACGAAGAAAGATAGTATGAAGGAAGCTAACAATT
TGCTTGATCTTTCGCTGAATGCGGATTTGAAAGTAGAAATGAAAGATGAT
GGTGGATGTTTTGTCCAATGCTTGACTTGTAATTACTTTCTACAATCTTC
CAAAACAAAATCCGCTTCGTAAGTCCTATAAATTCTTTCTACTTTcacaa
attttgatgaaattaaatTCTGTAGTGAACTGtttgatgatttgattttg
atcttGACGGTAATTAGTTAATTGTTATAATGTCAATTCTAAGCGATTAG
TTTAAGAGCCCTAATTTCGATATAAAAACTAAGGAATTAATGAATTTCAG
GCAGGATTCATGGCAACTTAGTTCGATAACTGTGTTTTCATACTCGATTA
CGAACTTCATGTTGTATGAAATGTATTTATATTGATATCTATTGTTATTA
TCAGATCTTGCTGCTCCATCAACCTTGGCAATGGAATCCACTACAATAAA
TTTAAAACGTCAGACCTGGTGGCTGGAACGAAGGCTGAAAATTGCCAACC
ATGGTACAGCTTTAAGAATTATATACTGGCCCACTTCAACTTTCCGGGAG
ACAAAGGAGAAGGGGTTTTGCATTTCAAAGCCAAGCAGTTCGAAATCAAA
GACCGTCGAAAAAAAAGCTTACAAATGGAAGTGACAAAAAATGTAGTAAG
CACCGCATTAACCGTTTGCAAGGTCAAATCAGCTGGTCTATCCTTTGAAA
CATTGTTAAGCTTAGTATCAACGTGTGGTGGTGACATCGGAAACATAGGT
CATGGAAGATATTAAATTTAATTCTTttgctgaaatattttttaaattcg
gTTTTGAAAAAACTGTATTGAAAATCAGTTTTGTTCCACTCCTCCTATCC
TTGGAGATATTGATTGTCTCCAATCTTTTCTCTGGtagattttgaaatta
aagtgtgttcaattttttaacatttggCAAACTTAGGCTTGGTATATGCT
TAGGCAATGCttaagtttttgaaagatttgagCTTAGGTATGTTTATAGg
cgatatgcttataaaaacgtaTGCaggtttttcaaaagttagAATTAAAA
TCGTTTTTAGAAACCTATTTCCTGATATCATTGATGCGGCTTACCATTAC
GTCATGAAACAAACGATAGAATTTTTGCAAACACCGTTGTTGTGTACAGG
ACTCTGTCCACACATAGCTGTTGCCTCGGACAAGTCTACCCCTGGTCGCG
AGACAAATCACGCCATAATGATCATCATACCATTTAACGGCAAACGCATT
CCGATGCCTATCGATGCTCCTTTGGTTTACGAGATGAACGATGAAAACAA
TTTAGAAGGTGGAAGTGGAGAAGATCTAGCTTACCAAATTACAGATGTTC
TGAAAAAGAGGCTTAAGATCGACGAAGAAAAAATTCATTACATCAGAGGT
TAGTAATTATTACGTTCTTCATTTGATTTTGAGGTGAAAGTCTCTTGAAA
AAGAAAGTCATGGAAGAGGCTGGGAtcttaaattcttaattttagCTTTC
CCATTGGGTTTCTGCATTATCCCTCGACTgaattttggttgtttgttaGA
AGAGTCACCAGTAAATTTGTCAGTAAAGTAAATTCATTTCTTTTAAAGCA
TTCCATGCTGATGGACAATACCAATGCGATACGTTTCAAAGCAGGTTCAA
GTCTAACTTCCAATCGCCAGTCAAGGAAATTGATCCGTTTGTTCTATTAC
CGTGGGATACATCACACTGGATGGACCTTGCTATGGAAAAACTGTATGAG
GATAGCCTTTCTTCGAGCTTCTtgaaacagttagtcacacggGCCAATCG
TTTTAATACAATGTTTCGACATGGGAAAGGGCACGAGGAATACAAGGGGT
TAGCAGATTCACTTGGTTTGAAGTCGTTAGAGGTTGTTGGGTATTCAACT
ACAAGGTTTTTCTCCTCCTCATATGAACAGTGGGATAAAATCTATCATTC
TTACCCGGCACTcatcgaaacttataaaaagtTCAGAGAACAAGGTGATA
ATTGCGACGAAACAAGATACCAGGTAGGTTGACCCGATTTTATTACATAC
TTCAAATAATTCAGTCAGTATATCATGGCTCGTAAAAATGGTTGTTCTTC
AAGAATGATTTCACATTCctcttttgaaaatgtgataAGTATAATGAAAT
AATTTGTATTAATTATGTTCAATTTCTTACTACGGATTGTTTGTGTGATG
GTCATTTGTTTTCTCTTATTCAGATCCGCGGGCAAGATTTTGCTATCGAC
ATCTGTGGCGCAGCTGATGTTCTAAGACCAATCGTCTTGATGATGGTACG
CTGCCAAGCAGTTGATTTACCTCTGTGGAAAGTACCGACCTGGTTTCACA
GAATGATCCGTCAGCTTGAGTCAACAGCAGAAGAAGTGAAGAAGAGGGAA
GGATTCTGCTCTTCACTCAACTTGACCTACCTTggtgaaaattggaaatc
tttgACCGCGAACGAAAAGAACAAGAGGAGTGAAAAGTTGGGGACATTCA
AGAATGTAGATGTAATTAAAGGCTGGTTAGTTACAGACAAAGGAACTGTC
GAATCTGAAGCAGGTGATGATTCTCTCTATATAATAATAGCCTTACGTGT
CTGAAGCCTTTTTAGCAGCGTTTTtgttttcgctagcgatttaaACTCGC
ACGGGACTTTTATTAGGGGGTATTGTTTCATTTAAAAGTAACAGTTTTCT
TCCTGTTTTATTCGAAATACAAACAGTGGAATCCCCCGGTTGAAAATCAT
TAGCACGTCACTGAAGTAattgcaaaaaagaaaaaaattggattactgaa
aagaaatgaaaatgtcTTTGGCGAAGATTAAGATACTTATTTtggtatat
ttttaaaaaattattgtcTTCAATGAAGCTAATGAAATAGTGAAAAGTCG
TCTGTGATGACGTCTGGGACACCTAGtatttattatattatatattctAC
TTCTAATATCGATGGATATTTTGTGTTGTAACAAAAAATGGTAAGAAATT
GTTTAGTTCTAGAGTACATAGATAAAAGTATTGAATGGTTTATATTTGAA
CTTGTATAAATTTCGTTATAGCTGATACGAAGAAAACCAAGAAGAAACAA
TATACTTGGAAGTATCGGAGCTCAGAAGAGTGTCTGTCGGATCTTGTCAC
TCTGGCAAAAGAAGCGAAAACCCTAATATCAACGAGGTTCGATTCGTCAG
TTGACCAAGAGGTTAAAGATCTAGCCGTTATTTTTGATCTCGAAAATACG
GTTCTCCTACTTAAAGATTTTAAACGTGTGGGGAATAAGTTGAAAGCAAA
GCGCAAAGATATCACAAAATTTGAAACTAATGGTGCAAAGGAGTTCGAAA
GTTTTTACAAACACGTTTGTCAACTACCTCAAGTAGAAAGCATGTACGAA
AAGGACTCTAATCTTGATTTGCTCCCACATCATGCCTCaagtgttttgaa
aaaataccgATCCAGTATAAAATCCATGGTATTTGAGACCCACACAAAAG
ATCTATTCACTACACCGAAAGGAGAGAAGTTGAAGAATGTTTCCCAGTCA
CAGTTGGTCGAAATTAAGCCGTCAAAGGAACGAGATTTGACCCAGCTTTT
TACTTTAACCTTTGAAAACGGAATATCTGAGGAAGCCATCGTTGCCGAAA
GCAAGTTTGCTGAGTTGCTATATACAAACGAGGCTGTTTATACTTCTTTT
GGAAAGGAAGTCCGCATTGCCTTGGACGTTGCCCTCAGATCAGGTGGCTG
TGAAGCTATAGTCGAGGGTTTCTATAGCTTGGtcaaaagaaacataaaaa
gaACGGTCGTCAAAGAAATAAAACTCTAACTCAAAGAGCTATAGTGGATT
GGTGTTTGCCC

Coding sequence (CDS) from alignment at sc0000781:29274..35034+

>TCONS_00029987 ID=TCONS_00029987|Name=TCONS_00029987|organism=Clytia hemisphaerica|type=CDS|length=7272bp|location=Sequence derived from alignment at sc0000781:29274..35034+ (Clytia hemisphaerica)
ATGAAACAAACGATAGAATTTTTGCAAACACCGTTGTTGTGTACAGGACT
CTGTCCACACATAGCTGTTGCCTCGGACAAGTCTACCCCTGGTCGCGAGA
CAAATCACGCCATAATGATCATCATACCATTTAACGGCAAACGCATTCCG
ATGCCTATCGATGCTCCTTTGGTTTACGAGATGAACGATGAAAACAATTT
AGAAGGTGGAAGTGGAGAAGATCTAGCTTACCAAATTACAGATGTTCTGA
AAAAGAGGCTTAAGATCGACGAAGAAAAAATTCATTACATCAGAGCATTC
CATGCTGATGGACAATACCAATGCGATACGTTTCAAAGCAGGTTCAAGTC
TAACTTCCAATCGCCAGTCAAGGAAATTGATCCGTTTGTTCTATTACCGT
GGGATACATCACACTGGATGGACCTTGCTATGGAAAAACTGTATGAGGAT
AGCCTTTCTTCGAGCTTCTtgaaacagttagtcacacggGCCAATCGTTT
TAATACAATGTTTCGACATGGGAAAGGGCACGAGGAATACAAGGGGTTAG
CAGATTCACTTGGTTTGAAGTCGTTAGAGGTTGTTGGGTATTCAACTACA
AGGTTTTTCTCCTCCTCATATGAACAGTGGGATAAAATCTATCATTCTTA
CCCGGCACTcatcgaaacttataaaaagtTCAGAGAACAAGGTGATAATT
GCGACGAAACAAGATACCAGATCCGCGGGCAAGATTTTGCTATCGACATC
TGTGGCGCAGCTGATGTTCTAAGACCAATCGTCTTGATGATGGTACGCTG
CCAAGCAGTTGATTTACCTCTGTGGAAAGTACCGACCTGGTTTCACAGAA
TGATCCGTCAGCTTGAGTCAACAGCAGAAGAAGTGAAGAAGAGGGAAGGA
TTCTGCTCTTCACTCAACTTGACCTACCTTggtgaaaattggaaatcttt
gACCGCGAACGAAAAGAACAAGAGGAGTGAAAAGTTGGGGACATTCAAGA
ATGTAGATGTAATTAAAGGCTGGTTAGTTACAGACAAAGGAACTGTCGAA
TCTGAAGCAGCTGATACGAAGAAAACCAAGAAGAAACAATATACTTGGAA
GTATCGGAGCTCAGAAGAGTGTCTGTCGGATCTTGTCACTCTGGCAAAAG
AAGCGAAAACCCTAATATCAACGAGGTTCGATTCGTCAGTTGACCAAGAG
GTTAAAGATCTAGCCGTTATTTTTGATCTCGAAAATACGGTTCTCCTACT
TAAAGATTTTAAACGTGTGGGGAATAAGTTGAAAGCAAAGCGCAAAGATA
TCACAAAATTTGAAACTAATGGTGCAAAGGAGTTCGAAAGTTTTTACAAA
CACGTTTGTCAACTACCTCAAGTAGAAAGCATGTACGAAAAGGACTCTAA
TCTTGATTTGCTCCCACATCATGCCTCaagtgttttgaaaaaataccgAT
CCAGTATAAAATCCATGGTATTTGAGACCCACACAAAAGATCTATTCACT
ACACCGAAAGGAGAGAAGTTGAAGAATGTTTCCCAGTCACAGTTGGTCGA
AATTAAGCCGTCAAAGGAACGAGATTTGACCCAGCTTTTTACTTTAACCT
TTGAAAACGGAATATCTGAGGAAGCCATCGTTGCCGAAAGCAAGTTTGCT
GAGTTGCTATATACAAACGAGGCTGTTTATACTTCTTTTGGAAAGGAAGT
CCGCATTGCCTTGGACGTTGCCCTCAGATCAGGTGGCTGTGAAGCTATAG
TCGAGGGTTTCTATAGCTTGGtcaaaagaaacataaaaagaACGGTCGTC
AAAGAAATAAAACTCTAAATGAAACAAACGATAGAATTTTTGCAAACACC
GTTGTTGTGTACAGGACTCTGTCCACACATAGCTGTTGCCTCGGACAAGT
CTACCCCTGGTCGCGAGACAAATCACGCCATAATGATCATCATACCATTT
AACGGCAAACGCATTCCGATGCCTATCGATGCTCCTTTGGTTTACGAGAT
GAACGATGAAAACAATTTAGAAGGTGGAAGTGGAGAAGATCTAGCTTACC
AAATTACAGATGTTCTGAAAAAGAGGCTTAAGATCGACGAAGAAAAAATT
CATTACATCAGAGCATTCCATGCTGATGGACAATACCAATGCGATACGTT
TCAAAGCAGGTTCAAGTCTAACTTCCAATCGCCAGTCAAGGAAATTGATC
CGTTTGTTCTATTACCGTGGGATACATCACACTGGATGGACCTTGCTATG
GAAAAACTGTATGAGGATAGCCTTTCTTCGAGCTTCTtgaaacagttagt
cacacggGCCAATCGTTTTAATACAATGTTTCGACATGGGAAAGGGCACG
AGGAATACAAGGGGTTAGCAGATTCACTTGGTTTGAAGTCGTTAGAGGTT
GTTGGGTATTCAACTACAAGGTTTTTCTCCTCCTCATATGAACAGTGGGA
TAAAATCTATCATTCTTACCCGGCACTcatcgaaacttataaaaagtTCA
GAGAACAAGGTGATAATTGCGACGAAACAAGATACCAGATCCGCGGGCAA
GATTTTGCTATCGACATCTGTGGCGCAGCTGATGTTCTAAGACCAATCGT
CTTGATGATGGTACGCTGCCAAGCAGTTGATTTACCTCTGTGGAAAGTAC
CGACCTGGTTTCACAGAATGATCCGTCAGCTTGAGTCAACAGCAGAAGAA
GTGAAGAAGAGGGAAGGATTCTGCTCTTCACTCAACTTGACCTACCTTgg
tgaaaattggaaatctttgACCGCGAACGAAAAGAACAAGAGGAGTGAAA
AGTTGGGGACATTCAAGAATGTAGATGTAATTAAAGGCTGGTTAGTTACA
GACAAAGGAACTGTCGAATCTGAAGCAGCTGATACGAAGAAAACCAAGAA
GAAACAATATACTTGGAAGTATCGGAGCTCAGAAGAGTGTCTGTCGGATC
TTGTCACTCTGGCAAAAGAAGCGAAAACCCTAATATCAACGAGGTTCGAT
TCGTCAGTTGACCAAGAGGTTAAAGATCTAGCCGTTATTTTTGATCTCGA
AAATACGGTTCTCCTACTTAAAGATTTTAAACGTGTGGGGAATAAGTTGA
AAGCAAAGCGCAAAGATATCACAAAATTTGAAACTAATGGTGCAAAGGAG
TTCGAAAGTTTTTACAAACACGTTTGTCAACTACCTCAAGTAGAAAGCAT
GTACGAAAAGGACTCTAATCTTGATTTGCTCCCACATCATGCCTCaagtg
ttttgaaaaaataccgATCCAGTATAAAATCCATGGTATTTGAGACCCAC
ACAAAAGATCTATTCACTACACCGAAAGGAGAGAAGTTGAAGAATGTTTC
CCAGTCACAGTTGGTCGAAATTAAGCCGTCAAAGGAACGAGATTTGACCC
AGCTTTTTACTTTAACCTTTGAAAACGGAATATCTGAGGAAGCCATCGTT
GCCGAAAGCAAGTTTGCTGAGTTGCTATATACAAACGAGGCTGTTTATAC
TTCTTTTGGAAAGGAAGTCCGCATTGCCTTGGACGTTGCCCTCAGATCAG
GTGGCTGTGAAGCTATAGTCGAGGGTTTCTATAGCTTGGtcaaaagaaac
ataaaaagaACGGTCGTCAAAGAAATAAAACTCTAAATGAAACAAACGAT
AGAATTTTTGCAAACACCGTTGTTGTGTACAGGACTCTGTCCACACATAG
CTGTTGCCTCGGACAAGTCTACCCCTGGTCGCGAGACAAATCACGCCATA
ATGATCATCATACCATTTAACGGCAAACGCATTCCGATGCCTATCGATGC
TCCTTTGGTTTACGAGATGAACGATGAAAACAATTTAGAAGGTGGAAGTG
GAGAAGATCTAGCTTACCAAATTACAGATGTTCTGAAAAAGAGGCTTAAG
ATCGACGAAGAAAAAATTCATTACATCAGAGCATTCCATGCTGATGGACA
ATACCAATGCGATACGTTTCAAAGCAGGTTCAAGTCTAACTTCCAATCGC
CAGTCAAGGAAATTGATCCGTTTGTTCTATTACCGTGGGATACATCACAC
TGGATGGACCTTGCTATGGAAAAACTGTATGAGGATAGCCTTTCTTCGAG
CTTCTtgaaacagttagtcacacggGCCAATCGTTTTAATACAATGTTTC
GACATGGGAAAGGGCACGAGGAATACAAGGGGTTAGCAGATTCACTTGGT
TTGAAGTCGTTAGAGGTTGTTGGGTATTCAACTACAAGGTTTTTCTCCTC
CTCATATGAACAGTGGGATAAAATCTATCATTCTTACCCGGCACTcatcg
aaacttataaaaagtTCAGAGAACAAGGTGATAATTGCGACGAAACAAGA
TACCAGATCCGCGGGCAAGATTTTGCTATCGACATCTGTGGCGCAGCTGA
TGTTCTAAGACCAATCGTCTTGATGATGGTACGCTGCCAAGCAGTTGATT
TACCTCTGTGGAAAGTACCGACCTGGTTTCACAGAATGATCCGTCAGCTT
GAGTCAACAGCAGAAGAAGTGAAGAAGAGGGAAGGATTCTGCTCTTCACT
CAACTTGACCTACCTTggtgaaaattggaaatctttgACCGCGAACGAAA
AGAACAAGAGGAGTGAAAAGTTGGGGACATTCAAGAATGTAGATGTAATT
AAAGGCTGGTTAGTTACAGACAAAGGAACTGTCGAATCTGAAGCAGCTGA
TACGAAGAAAACCAAGAAGAAACAATATACTTGGAAGTATCGGAGCTCAG
AAGAGTGTCTGTCGGATCTTGTCACTCTGGCAAAAGAAGCGAAAACCCTA
ATATCAACGAGGTTCGATTCGTCAGTTGACCAAGAGGTTAAAGATCTAGC
CGTTATTTTTGATCTCGAAAATACGGTTCTCCTACTTAAAGATTTTAAAC
GTGTGGGGAATAAGTTGAAAGCAAAGCGCAAAGATATCACAAAATTTGAA
ACTAATGGTGCAAAGGAGTTCGAAAGTTTTTACAAACACGTTTGTCAACT
ACCTCAAGTAGAAAGCATGTACGAAAAGGACTCTAATCTTGATTTGCTCC
CACATCATGCCTCaagtgttttgaaaaaataccgATCCAGTATAAAATCC
ATGGTATTTGAGACCCACACAAAAGATCTATTCACTACACCGAAAGGAGA
GAAGTTGAAGAATGTTTCCCAGTCACAGTTGGTCGAAATTAAGCCGTCAA
AGGAACGAGATTTGACCCAGCTTTTTACTTTAACCTTTGAAAACGGAATA
TCTGAGGAAGCCATCGTTGCCGAAAGCAAGTTTGCTGAGTTGCTATATAC
AAACGAGGCTGTTTATACTTCTTTTGGAAAGGAAGTCCGCATTGCCTTGG
ACGTTGCCCTCAGATCAGGTGGCTGTGAAGCTATAGTCGAGGGTTTCTAT
AGCTTGGtcaaaagaaacataaaaagaACGGTCGTCAAAGAAATAAAACT
CTAAATGAAACAAACGATAGAATTTTTGCAAACACCGTTGTTGTGTACAG
GACTCTGTCCACACATAGCTGTTGCCTCGGACAAGTCTACCCCTGGTCGC
GAGACAAATCACGCCATAATGATCATCATACCATTTAACGGCAAACGCAT
TCCGATGCCTATCGATGCTCCTTTGGTTTACGAGATGAACGATGAAAACA
ATTTAGAAGGTGGAAGTGGAGAAGATCTAGCTTACCAAATTACAGATGTT
CTGAAAAAGAGGCTTAAGATCGACGAAGAAAAAATTCATTACATCAGAGC
ATTCCATGCTGATGGACAATACCAATGCGATACGTTTCAAAGCAGGTTCA
AGTCTAACTTCCAATCGCCAGTCAAGGAAATTGATCCGTTTGTTCTATTA
CCGTGGGATACATCACACTGGATGGACCTTGCTATGGAAAAACTGTATGA
GGATAGCCTTTCTTCGAGCTTCTtgaaacagttagtcacacggGCCAATC
GTTTTAATACAATGTTTCGACATGGGAAAGGGCACGAGGAATACAAGGGG
TTAGCAGATTCACTTGGTTTGAAGTCGTTAGAGGTTGTTGGGTATTCAAC
TACAAGGTTTTTCTCCTCCTCATATGAACAGTGGGATAAAATCTATCATT
CTTACCCGGCACTcatcgaaacttataaaaagtTCAGAGAACAAGGTGAT
AATTGCGACGAAACAAGATACCAGATCCGCGGGCAAGATTTTGCTATCGA
CATCTGTGGCGCAGCTGATGTTCTAAGACCAATCGTCTTGATGATGGTAC
GCTGCCAAGCAGTTGATTTACCTCTGTGGAAAGTACCGACCTGGTTTCAC
AGAATGATCCGTCAGCTTGAGTCAACAGCAGAAGAAGTGAAGAAGAGGGA
AGGATTCTGCTCTTCACTCAACTTGACCTACCTTggtgaaaattggaaat
ctttgACCGCGAACGAAAAGAACAAGAGGAGTGAAAAGTTGGGGACATTC
AAGAATGTAGATGTAATTAAAGGCTGGTTAGTTACAGACAAAGGAACTGT
CGAATCTGAAGCAGCTGATACGAAGAAAACCAAGAAGAAACAATATACTT
GGAAGTATCGGAGCTCAGAAGAGTGTCTGTCGGATCTTGTCACTCTGGCA
AAAGAAGCGAAAACCCTAATATCAACGAGGTTCGATTCGTCAGTTGACCA
AGAGGTTAAAGATCTAGCCGTTATTTTTGATCTCGAAAATACGGTTCTCC
TACTTAAAGATTTTAAACGTGTGGGGAATAAGTTGAAAGCAAAGCGCAAA
GATATCACAAAATTTGAAACTAATGGTGCAAAGGAGTTCGAAAGTTTTTA
CAAACACGTTTGTCAACTACCTCAAGTAGAAAGCATGTACGAAAAGGACT
CTAATCTTGATTTGCTCCCACATCATGCCTCaagtgttttgaaaaaatac
cgATCCAGTATAAAATCCATGGTATTTGAGACCCACACAAAAGATCTATT
CACTACACCGAAAGGAGAGAAGTTGAAGAATGTTTCCCAGTCACAGTTGG
TCGAAATTAAGCCGTCAAAGGAACGAGATTTGACCCAGCTTTTTACTTTA
ACCTTTGAAAACGGAATATCTGAGGAAGCCATCGTTGCCGAAAGCAAGTT
TGCTGAGTTGCTATATACAAACGAGGCTGTTTATACTTCTTTTGGAAAGG
AAGTCCGCATTGCCTTGGACGTTGCCCTCAGATCAGGTGGCTGTGAAGCT
ATAGTCGAGGGTTTCTATAGCTTGGtcaaaagaaacataaaaagaACGGT
CGTCAAAGAAATAAAACTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017141XLOC_017141Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029987-exon-sc0000781-1491911889:29274..29987TCONS_00029987-exon-sc0000781-1491911889:29274..29987Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:29274..29987TCONS_00029987-exon-sc0000781-1510915933:29274..29987Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:29274..29987TCONS_00029987-exon-sc0000781-1575043694:29274..29987Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:30064..30384TCONS_00029987-exon-sc0000781-1491911889:30064..30384Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:30064..30384TCONS_00029987-exon-sc0000781-1510915933:30064..30384Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:30064..30384TCONS_00029987-exon-sc0000781-1575043694:30064..30384Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:30653..30715TCONS_00029987-exon-sc0000781-1491911889:30653..30715Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:30653..30715TCONS_00029987-exon-sc0000781-1510915933:30653..30715Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:30653..30715TCONS_00029987-exon-sc0000781-1575043694:30653..30715Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:30892..31291TCONS_00029987-exon-sc0000781-1491911889:30892..31291Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:30892..31291TCONS_00029987-exon-sc0000781-1510915933:30892..31291Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:30892..31291TCONS_00029987-exon-sc0000781-1575043694:30892..31291Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:31578..31818TCONS_00029987-exon-sc0000781-1491911889:31578..31818Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:31578..31818TCONS_00029987-exon-sc0000781-1510915933:31578..31818Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:31578..31818TCONS_00029987-exon-sc0000781-1575043694:31578..31818Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:32234..32571TCONS_00029987-exon-sc0000781-1491911889:32234..32571Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:32234..32571TCONS_00029987-exon-sc0000781-1510915933:32234..32571Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:32234..32571TCONS_00029987-exon-sc0000781-1575043694:32234..32571Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:32772..33196TCONS_00029987-exon-sc0000781-1491911889:32772..33196Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:32772..33196TCONS_00029987-exon-sc0000781-1510915933:32772..33196Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:32772..33196TCONS_00029987-exon-sc0000781-1575043694:32772..33196Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:33397..33736TCONS_00029987-exon-sc0000781-1491911889:33397..33736Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:33397..33736TCONS_00029987-exon-sc0000781-1510915933:33397..33736Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:33397..33736TCONS_00029987-exon-sc0000781-1575043694:33397..33736Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1491911889:34245..35034TCONS_00029987-exon-sc0000781-1491911889:34245..35034Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1510915933:34245..35034TCONS_00029987-exon-sc0000781-1510915933:34245..35034Clytia hemisphaericaexon
TCONS_00029987-exon-sc0000781-1575043694:34245..35034TCONS_00029987-exon-sc0000781-1575043694:34245..35034Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029987-proteinTCONS_00029987-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000781supercontigsc0000781:29274..35034 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.534035	0.50341	0.880143	0.401838	1.44035	1.252	1.35029	2.20686	0.64503	1.02194	1.04603	0.995861	0.686662	0.77458	0.626702	0.574919	0.628074	0.671149	0.359538	0.752461	0.654025	0.554071	0.44903	0.296897	1.10852	1.1599	0.414952	0.338648	0.3754	0.402604
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029987 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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