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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029993 ID=TCONS_00029993|Name=TCONS_00029993|organism=Clytia hemisphaerica|type=transcript|length=978bp
NNCAAAATAGTCCAGAAATTCCAAATCATCACTTTCACGGGATGTGCgcc
aatccttaaaattttgcgccaaactccacgtcaacattgatttaagtcaa
tttaagtgtactttcacaacaaaaaccatattttcaatgtaatagaTCAT
CTTAGGAAATTTTCCTCACTGATACTGTCAGTTATAAGTTAATTTAAAGT
TGATCTGTTGTGATACAAGAATCCACTTGGACATCTAGCCGTGCACGATT
TCTCGTGAATGTAAATAATCAGCCGGAGGGCGAAGGGAGTGTCGCAGACC
TTCAATTATTCATCACACACAATTTTTAAACCAGCCTCCAGGCTTTCAAT
TCCCTAAACACTTAGATctttaaatagatacatcattgaatatgCCTTTC
GTCTTTTTGTCCTTCAAAGTTTTTCGGTAGGTGTCGTCGTCAAACTAAGT
TCATATCGGAAACGTTGAGTTTGAGAATCAAGTCTTTGGTTTCACCTAAC
TCAAGCTTTCTTAGTTGAGAAGAATGAAAGAGTAAAAATTGTCATCAGTC
AATCCAACATTTCCCAATAAAAGCAGTTTTCATAGTCAAAAACACTGGCT
GGACAGCCTCCTTCCTCCaaaatttgtatgtttttaaaaatatcacttCT
TTGGTTACCATCTTTGATATTAGGAAATCCCGCGAAAAAAAGGCGGTATT
AACTCAgacgcccgaaaagggcgtaaaaagatctttcgtttggtatgtca
tgatcctatgtttagatcagccataaagaaatcaggccctagcaacgggt
atgatttttcgttgctaaggaaaatactttagatctgggtctagaaaaaa
ccttatatctcagaaaatataaatgctacggccttaaaattttcagggtG
TGTTCAGAAAGGGTATAGGGTCTTGAAACGCGCAAAATCCcgaaatcgat
aattttttcaccaaatctcaaagcttca Run BLAST on NCBI transcript from alignment at sc0000781:52149..53220- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029993 ID=TCONS_00029993|Name=TCONS_00029993|organism=Clytia hemisphaerica|type=transcript|length=1072bp|location=Sequence derived from alignment at sc0000781:52149..53220- (Clytia hemisphaerica)
NNCAAAATAGTCCAGAAATTCCAAATCATCACTTTCACGGGATGTGCGCC
AATCCTTAAAATTTTGCGCCAAACTCCACGTCAACATTGATTTAAGTCAA
TTTAAGTGTACTTTCACAACAAAAACCATATTTTCAATGTAATAGATCAT
CTTAGGAAATTTTCCTCACTGATACTGTCAGTTATAAGTTAATTTAAAGT
TGATCTGTTGTGATACAAGAATCCACTTGGACATCTAGCCGTGCACGATT
TCTCGTGAATGTAAATAATCAGCCGGAGGGCGAAGGGAGTGTCGCAGACC
TTCAATTATTCATCACACACAATTTTTAAACCAGCCTCCAGGCTTTCAAT
TCCCTAAACACTTAGATCTTTAAATAGATACATCATTGAATATGCCTTTC
GTCTTTTTGTCCTTCAAAGTTTTTCGGTAGGTGTCGTCGTCAAACTAAGT
AAGTTCATCATATTATATCGGAAACGTTGAGTTTGAGAATCAAGTCTTTG
GTTTCACCTAACTCANTTCGGTAGGTGTCGTCGTCAAACTAAGTTCATAT
CGGAAACGTTGAGTTTGAGAATCAAGTCTTTGGTTTCACCTAACTCAAGC
TTTCTTAGTTGAGAAGAATGAAAGAGTAAAAATTGTCATCAGTCAATCCA
ACATTTCCCAATAAAAGCAGTTTTCATAGTCAAAAACACTGGCTGGACAG
CCTCCTTCCTCCAAAATTTGTATGTTTTTAAAAATATCACTTCTTTGGTT
ACCATCTTTGATATTAGGAAATCCCGCGAAAAAAAGGCGGTATTAACTCA
GACGCCCGAAAAGGGCGTAAAAAGATCTTTCGTTTGGTATGTCATGATCC
TATGTTTAGATCAGCCATAAAGAAATCAGGCCCTAGCAACGGGTATGATT
TTTCGTTGCTAAGGAAAATACTTTAGATCTGGGTCTAGAAAAAACCTTAT
ATCTCAGAAAATATAAATGCTACGGCCTTAAAATTTTCAGGGTGTGTTCA
GAAAGGGTATAGGGTCTTGAAACGCGCAAAATCCCGAAATCGATAATTTT
TTCACCAAATCTCAAAGCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029993-exon-sc0000781-1575043694:52791..53220 | TCONS_00029993-exon-sc0000781-1575043694:52791..53220 | Clytia hemisphaerica | exon |
| TCONS_00029993-exon-sc0000781-1575043694:52149..52696 | TCONS_00029993-exon-sc0000781-1575043694:52149..52696 | Clytia hemisphaerica | exon |
| TCONS_00029993-exon-sc0000781-1510915933:52791..53220 | TCONS_00029993-exon-sc0000781-1510915933:52791..53220 | Clytia hemisphaerica | exon |
| TCONS_00029993-exon-sc0000781-1510915933:52149..52696 | TCONS_00029993-exon-sc0000781-1510915933:52149..52696 | Clytia hemisphaerica | exon |
| TCONS_00029993-exon-sc0000781-1491911889:52791..53220 | TCONS_00029993-exon-sc0000781-1491911889:52791..53220 | Clytia hemisphaerica | exon |
| TCONS_00029993-exon-sc0000781-1491911889:52149..52696 | TCONS_00029993-exon-sc0000781-1491911889:52149..52696 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000781 | supercontig | sc0000781:52149..53220 - |
Blast
The following BLAST results are available for this feature:
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