TCONS_00030005 (transcript) - C. hemisphaerica

Overview
NameTCONS_00030005
Unique NameTCONS_00030005
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1722

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00030005 ID=TCONS_00030005|Name=TCONS_00030005|organism=Clytia hemisphaerica|type=transcript|length=1722bp
CATCTTTACCAGAAAATCAATGTAATGTTATAATACTGTATTACTTTTCT
GTAGGATAAATCTTTCACATCAAAGTCAAACGAGGAATCCGAAAAACGTG
GAAAGATGTACAACCATGCTCAACTTGAGCTTTTGAAAAACCTTCTCAAG
CATGGGGCAGATGTAAACAGTATACGCAAAGACAAGCATTCGTTATTCAC
GTTCGCTTTATCCCAATCCTACTTAAAAATCTGTGAAATTTTGTTGGACG
ACCCGAACATAGACTTNACGCAAAGATAAGCATTCGTTATTCACGTTCGC
TTTATCCCAATCCTACTTAAAAATCTGTGAAATTTTGTTGGACGACCCGA
ACATAGACTTGATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACAC
ATGATGTTGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTT
TCATAATATTCTGAAAAAGtGTAATTTGACCAAGGAGTTCAGCAACAAGG
TGGACAATAACGGTTTCACACCTTTGCTATCATTCGTCTACAACATTGCA
AGTAAAAACCAGATGAAGAGAGCTCTACCGCAGTACACCAAGCTTGTTAA
AACTTTGTTGACAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAAGA
CGGCAATGGGACCTGACGACAAGCCTGCTCTACAATACACTTTGAGGCCT
AAACCCTCCCTGGATTACGAAAAATCagatgaaaatcaagaaaagttCAA
AGGTTACAACAGCTTTGGACAAATGAACATTTTCCATTTACTTGCTATGA
AGAATATCAGCCGAGAAGTTATGGAGGTGTTTTacaaacatgtgcccaaa
attGGTGAACTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTACA
TTACAAGCTGATGAATACTACCAATTACACGCAAGACTTTTTGGATCATG
GAGCGAACGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGCA
CCTACTCTAGTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAGA
TGAAATTGACGAGGAAGAAAGATTTGGTGGTTCCTCTACAGAAGAAATAG
ATGACGGCTTATTAGCAGTATTGAAAGAATGCAAAAATGTCAACCTAGTT
GACCAGAATGGAATGTCTGCTGCACATCACGCCTCGCTTAAGAAAAAGCC
TTCTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTC
TCGATGTGAACGCGCAAGATGACAAAAATGGTCGCACAGTGTTACACAAT
CTAGTAATGCTGGCATCAGGTGATTATGAAACAACCAATGAACTTGAAAT
ATTGCTGATATCTCATGGCGCACTATTAGATGTTGAGTGTTCGCGCGGTC
GCTTCCCGATTCATTACGCATTCTTTGACAAATCAAACAGCAAGAAATTG
GACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTAC
TGAATACAACCAATCTAAATTCAACATGAAAAATTACGTCAGTCATCAAG
ACAATGAGGGGAATACGCCGTTGCATTATGGGTGCCAACGTGGTGCGACT
ATCTCATGCATGCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACAGA
TAAGAATGGAAACACGCCTTTGGCTATCGCATTGAAAAACAAGCATCATG
GCACTGCTATGATGATGCTTCA
Run BLAST on NCBI

protein sequence of TCONS_00030005-protein

>TCONS_00030005-protein ID=TCONS_00030005-protein|Name=TCONS_00030005-protein|organism=Clytia hemisphaerica|type=polypeptide|length=453bp
MVYENKHGQNVLHMMLGKLEPEDKKTFQLFHNILKKCNLTKEFSNKVDNN
GFTPLLSFVYNIASKNQMKRALPQYTKLVKTLLTECFVDTDILVQKTAMG
PDDKPALQYTLRPKPSLDYEKSDENQEKFKGYNSFGQMNIFHLLAMKNIS
REVMEVFYKHVPKIGELLNAKDLHGRTPLHYKLMNTTNYTQDFLDHGANV
EIGSSNKEKDELAPTLVIAMKSWIKITKADEIDEEERFGGSSTEEIDDGL
LAVLKECKNVNLVDQNGMSAAHHASLKKKPSVSKKIAIFKRLLKAGLDVN
AQDDKNGRTVLHNLVMLASGDYETTNELEILLISHGALLDVECSRGRFPI
HYAFFDKSNSKKLDSTNICDPMSLIHLLCTEYNQSKFNMKNYVSHQDNEG
NTPLHYGCQRGATISCMQLKKLGADDKLTDKNGNTPLAIALKNKHHGTAM
MML
Run BLAST on NCBI

transcript from alignment at sc0000782:6817..13315+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00030005 ID=TCONS_00030005|Name=TCONS_00030005|organism=Clytia hemisphaerica|type=transcript|length=6499bp|location=Sequence derived from alignment at sc0000782:6817..13315+ (Clytia hemisphaerica)
CATCTTTACCAGAAAATCAATGTAATGTTATAATACTGTATTACTTTTCT
GTAGGATAAATCTTTCACATCAAAGTCAAACGAGGAATCCGAAAAACGTG
GAAAGATGTACAACCATGCTCAACTTGAGCTTTTGAAAAACCTTCTCAAG
CATGGGGCAGATGTAAACAGTATACGCAAAGACAAGCATTCGTTATTCAC
GTTCGCTTTATCCCAATCCTACTTAAAAATCTGTGAAATTTTGTTGGACG
ACCCGAACATAGACTTNACGCAAAGATAAGCATTCGTTATTCACGTTCGC
TTTATCCCAATCCTACTTAAAAATCTGTGAAATTTTGTTGGACGACCCGA
ACATAGACTTGATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACAC
ATGATGTTGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTT
TCATAATATTCTGAAAAAGGTATCTCACGAAGTCTTTCTttcacaaatta
tttttttcatgtaaCTTCCTATGGAAGCCGAGAAAAGTCAGTGCgcggaa
atttcaaaaacctgttgcgatattttttaaattggtgCAATCTTGAACAG
CGACAGCTTGAAAAATATTGCGATAGCTTCTGGAAATGCCACAGTCTGAA
AAATATCGTGACAACTTCTGAAAACGCAACAGTTTTGACAACGCGACAGC
TTGAAAAACATTTCGACAGTTTTAAAAACATCGCGACAGCTTGAAAAATA
TTGCGACAAGTTCTAGAAAATTTCGCACGCTTACACTTCTCACCTTCTAT
AACTTcccccattatggaagcaaacgttcgattttgcCTAAGGGATTGcc
ctctacagattcgaacgtttactTCCATAATGGCTACNGATTTTGCCTAA
GGGATTGccctctacagattcgaacgtttactTCCATAATGGCTACGTAA
CTTAGAACATGAAAACCTCtattattgattttttgaaagaatcaAACATA
GTACTGTGAAggctctttaactcgaacctctacaacttgaatgtctcctt
aactcgaacaagtctcctggtcccttcagttaaaggccggtctccacttt
cgcgcgaaatggacGACAGTTTTTTCCTCAACCTATTTTGCNAAAAGCTG
GAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAATATTCTGAAAAA
GGTATCTCACGTAGTCTTTCTTtcacaaattattttttatttcagaaatt
tcaaaaacctggCGCGATCTTTTTCAAATTGTCGCAATCTTGAACAGCGA
CAGTTTGAGAATCATCGAATGCCATATAAACATTATGCTCCATACCGCGA
AATTCCtataactcaaacaaatttgtgtttcccgtgcgtgttcgagctGT
GGAGACTGTAAATTATAtcaatttatattattttctttttcatcagtGTA
ATTTGACCAAGGAGTTCAGCAACAAGGTGGACAATAACGGTTTCACACCT
TTGCTATCATTCGTCTACAACATTGCAAGTAAAAACCAGATGAAGAGAGC
TCTACCGCAGTACACCAAGCTTGTTAAAACTTTGTTGACAGAATGTTTCG
TTGATACCGATATTCTGGTTCAAAAGACGGCAATGGGACCTGACGACAAG
GTTAGTTTTCTCATTAGATGCTGGTTAGATGCTACACGGACATTCCTCAA
GGTGTCCTGTAACCTACCggtcaatgttcttagccaaattattatttttc
taattattgaaaataaataaaaaatgtcacggtggagtgtgttggtttga
gttttctagagaCTTATTATTAAGCTGCGCATTTTTTTGATAGTTGATTA
TTATTAACTAGGTCAGCGCGTTTCAAACACACTGTTGGCGATCGCTTATT
TCCGACAAAATCATCGGAGATCTGTAGTGTTCActaagaaattaattttc
actTTGTCCATTTTTTCGTTTAGTCGTAGAAGGGCAAGGTTAATGGTTTA
TTACTTTACACCCTGCGATGCGGATCTGTCCCTGATAAATTATGGCAAGA
TTAGAGCAGCTAGACGAAATTATAAAGTCGAGTAGAATGGTCGATTGAAC
CTTACCTctttaaaagttgttttgttACTGAGTCCATGCAATTTCAATTC
ACGATACTTATTTTACTATCAAAATCgttgtagtaaaaaacaaaatgttt
acgcatgcgttttaaaacaGCTGTGAAATTATTGTCTCGCTTAAAGTAAA
TTAATTTAACAGCTCTAAGCATAATGTGGCATATTGAACATGGATAAATG
AGACAAACATTGAAATGATAGgggaatgacgtcataaaccaTACAAAAGT
GATGAATACAATTGACTACTTAAGGCTGTTATACATTTTATTTGATCTGC
AACTTTTGCCATTATTAGTCAGTACATTTCACATGATCAAAGCAAAAGTA
AAGCGTAGACCCTAGAGAAAAAAGTTACACTTTGAGGAAGGGGATGGGAT
ATAGCctgaagaaaatttaaaatctctcctattcagacaaaatgtaagga
aactaatgagtttataaaggtaagcgagtcaaacatttactttcgatttc
aaaaacgagATTTGACTTGTATATCTACACTGTTAAAATCGCCCTCAGGC
GATCGAAAATatttctttttcaaaagtcttttgttgatagtttctctttc
caaattattttctcaaaaatgtttaattttattatcaggtaggtccataa
aagtatagctggtgatatcaaaatcaaaatcttcttaATTTTATATCTTC
TACTAGCCTGCTCTACAATACACTTTGAGGCCTAAACCCTCCCTGGATTA
CGAAAAATCagatgaaaatcaagaaaagttCAAAGGTTACAACAGCTTTG
GACAAATGAACATTTTCCATTTACTTGCTATGAAGAATATCAGCCGAGAA
GTTATGGAGGTGTTTTacaaacatgtgcccaaaattGGTGAACTCCTGAA
TGCCAAAGATCTTCATGGTCGCACCCCTTTACATTACAAGCTGATGAATA
CTACCAATTACACGCAAGACTTTTTGGATCATGGAGCGAACGTTGAAATA
GGGTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTGC
GATGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGACGAGGAAG
AAAGGTTAGTGTCTTTATTACTGTAAAGAAAGATTTAGTCTAGGAGGGTT
TCCCCAATATTTTCACTATTGACTATCTTGCAGTGGTAGATCAACTGAAA
CGCTTGAGTTAGTGAAACTCTAAATTCCGTGACTATTTTCAAGAAGAAAT
CATAaataatttccttttttcacctgTTAGTTTTGGTAAAATTTTGTTGA
GAAGATCTTTTATAACAAAGAtaatgtttttgcttttttcatcAGATTTG
GTGGTTCCTCTACAGAAGAAATAGATGACGGCTTATTAGCAGTATTGAAA
GAATGCAAAAATGTCAACCTAGTTGACCAGAATGGAATGTCTGCTGCACA
TCACGCCTCGCTTAAGAAAAAGCCTTGTAAGTTTTCCTATACATCGTTAA
GCTTCCAGATTTATCAGTTGAACTCTAGacattttcaaaacaccaaaatG
TGAGCAATTTTAACAGCATCTAACCACGCATCTGATCATAGATCTACCGT
ATATGATATCCCCTTCAGCAGCACTGATATCATCAGGACAAAGTTCCAGA
TATGCTTAGATATTCAGTTTAGTTTTTGGACCATCATtactttaacccta
ttattatcaggctttttcgggttttgtattctcaagggtcACCCCccggt
gttttccaccagccttgcataacttttgatctagaaaagatttGGACTTG
AAACTTTGCAGAAATGTtttctaccataaaaggagttaatagaaaaaaat
ttgggttaatgacgtcatcatgaaggtgatgacgtcatcacaaagtttca
caattatcgctgaccaatgaaaaagtactattcaataaattagcaattaa
agttgaacgaatggagatttttcaagcctgttttgaatttctaaaagcaa
aaaagaataCCTTTAACAtaatttgccggtttttaacatactaataaaat
tagggttatattaaaagtcagaaactttcagagtgttacaaaaaattttc
agtgagcttATTAGCAAAAGAgggccagcctggtggaaaccccccctgat
aaaaataagGTTAAggaataatcagatggtttgtacAATTTTGCATGTGG
gatccttctattgtcctgagcaaaatcttaaaatatttttagctaactat
tttccaaagtttaGATATATAAGTTACAAGTGTTTGGTTTTtaggatgaa
aacaatagaatttgaaCGTAAGAAACGTGTAAGAACAAGAACCCATttgc
aaaaatatcaaattttgatatctcgattttggaaaattgttacacaaTTA
AATACTTTGAAGTTTTACTAATGACCACAGAAGATTTCTGtaatctaaat
atctcaaaccatctgattatccctttaaagacTCCAGAATCTTTTATCAA
TTGGATCTTGAACATTTTTCGAGATACCGAAAAGTTTGCAAATTGAAAGA
AAGTCAATCTATAAATGAATCTTCATATTTTCTTATAGCTGTCAGCAAGA
AAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAACGCG
CAAGATGACAAAAATGGTCGCACAGTGTTACACAATCTAGTAATGCTGGC
ATCAGGTGATTATGAAACAACCAATGAACTTGAAATATTGCTGATATCTC
ATGGCGCACTATTAGATGTTGAGTGTTCGCGCGGTCGCTTCCCGATTCAT
TACGCATTCTTTGACAAATCAAACAGGTAAGGGGATAATTGctttttatt
ataaacataCTTTCGTGTTTACGTACGTGTTTCACAAAGCCGATTTTTCG
TAAAAGTAAACTTTTTATAAGGCTGGTGTCATTTGATGGTCCTGTATGAT
CCCTTATCTACATTTAAACGCTAAGAATCGATATAAAATAGAAAGAGTGT
AGAGAAAGTTCGTTTCGAATAGTGCCCGACGTTTTTGACATTTGTCTGCT
TGGACAAATAATTAATAtataaagttcttccgtctcattCAGACGGATTT
CCGTTTCCAGGAAGATACAAATAAGGCTTCTCTTTCTTCAAGCTCCACAA
AATTatgcaaagttttaaaaattgttgtttAAAGTCCGATTTCCAGCCTG
GGTCAAAAAATGTGCTTTTACCACTATATAATCAAAGCGATGCGAAGCTT
tggatatttttcaaaaagtattcTACTTGGTTGATTCTTGATTTTATTTC
AGCAAGAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCA
TCTTTTGTGTACTGAATACAACCAATCTAAATTCAACATGAAAAATTACG
TCAGTCATCAAGACAATGAGGGGAATACGCCGTTGCATTATGGGTGCCAA
CGTGGTGCGACTATCTCATGCATGCAGttgaaaaaggtatttttgagaaa
ttgtgGAGTAGGTAGGCCGGTTGGCGGACGGGGttattcaacaaaatttt
aagaatgtgTTCGTCAATTTCTTGCGTAAAattccgtctcagacgaaaaa
ttttgttttgactaCTGGTGATGATGCCTTCTGTCATTGCTCTATCAGTG
GATCAGAACCTTCTCGCACGTTGGTCTTGACTTTTATCTTCGTGTCCCTT
ACAAATGGAAGACAACCCCCGTCCCCTTGTTTTAGCtggtttatgtatgt
gtgttttccaGCGACTGAGATTGTTAGGGTTCGACTTGGCTAGATCATGA
CAACTGAGGACGACGCTTAATCAGcatttttaccgtcctcgattttgcgg
gtcaaaagctttaagtggacacTAGGCTAGTCAAAACTGAGTTtcattcc
aaatcgcttcagtcactctgcTGTCctcaaaaagtgcaaatactTAAACT
CGCTAATATCTACCACCTGGACAGCACATGGgaaattttgtttgcttttt
cttAGCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACGCCT
TTGGCTATCGCATTGAAAAACAAGCATCATGGGTAAGAATCAGTCTGAga
tcaattttctaaaattgtttTCTATTATTAGTTTAGTATCGACCGATTCA
AAAGTCAGTTTGAtaccatttttgagaaaaagtcaCCCTTGCTTCTAGAA
CGAAAGATAAAGCGGGGTTTCGTTTTATAAGCAAAGTATGTCATGCCTCA
CTTCCCAGTTAGCCTGTAGACAATATTGTGATGCAACAGGACGGCTTCAG
AAAGCCCATTCTTCATCGAGAAATATATTCCGATACTTAACTTCGCTAAC
AAGAGTGGCTTGACTATTATTTTCTTAGCACTGCTATGATGATGCTTCA

Coding sequence (CDS) from alignment at sc0000782:6817..13315+

>TCONS_00030005 ID=TCONS_00030005|Name=TCONS_00030005|organism=Clytia hemisphaerica|type=CDS|length=10872bp|location=Sequence derived from alignment at sc0000782:6817..13315+ (Clytia hemisphaerica)
ATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACACATGATGTTGGG
AAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAATATTC
TGAAAAAGtGTAATTTGACCAAGGAGTTCAGCAACAAGGTGGACAATAAC
GGTTTCACACCTTTGCTATCATTCGTCTACAACATTGCAAGTAAAAACCA
GATGAAGAGAGCTCTACCGCAGTACACCAAGCTTGTTAAAACTTTGTTGA
CAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAAGACGGCAATGGGA
CCTGACGACAAGCCTGCTCTACAATACACTTTGAGGCCTAAACCCTCCCT
GGATTACGAAAAATCagatgaaaatcaagaaaagttCAAAGGTTACAACA
GCTTTGGACAAATGAACATTTTCCATTTACTTGCTATGAAGAATATCAGC
CGAGAAGTTATGGAGGTGTTTTacaaacatgtgcccaaaattGGTGAACT
CCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTACATTACAAGCTGA
TGAATACTACCAATTACACGCAAGACTTTTTGGATCATGGAGCGAACGTT
GAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGT
GATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGACG
AGGAAGAAAGATTTGGTGGTTCCTCTACAGAAGAAATAGATGACGGCTTA
TTAGCAGTATTGAAAGAATGCAAAAATGTCAACCTAGTTGACCAGAATGG
AATGTCTGCTGCACATCACGCCTCGCTTAAGAAAAAGCCTTCTGTCAGCA
AGAAAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAAC
GCGCAAGATGACAAAAATGGTCGCACAGTGTTACACAATCTAGTAATGCT
GGCATCAGGTGATTATGAAACAACCAATGAACTTGAAATATTGCTGATAT
CTCATGGCGCACTATTAGATGTTGAGTGTTCGCGCGGTCGCTTCCCGATT
CATTACGCATTCTTTGACAAATCAAACAGCAAGAAATTGGACTCGACAAA
CATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTACTGAATACAACC
AATCTAAATTCAACATGAAAAATTACGTCAGTCATCAAGACAATGAGGGG
AATACGCCGTTGCATTATGGGTGCCAACGTGGTGCGACTATCTCATGCAT
GCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAA
ACACGCCTTTGGCTATCGCATTGAAAAACAAGCATCATGGCACTGCTATG
ATGATGCTTATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACACAT
GATGTTGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTC
ATAATATTCTGAAAAAGtGTAATTTGACCAAGGAGTTCAGCAACAAGGTG
GACAATAACGGTTTCACACCTTTGCTATCATTCGTCTACAACATTGCAAG
TAAAAACCAGATGAAGAGAGCTCTACCGCAGTACACCAAGCTTGTTAAAA
CTTTGTTGACAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAAGACG
GCAATGGGACCTGACGACAAGCCTGCTCTACAATACACTTTGAGGCCTAA
ACCCTCCCTGGATTACGAAAAATCagatgaaaatcaagaaaagttCAAAG
GTTACAACAGCTTTGGACAAATGAACATTTTCCATTTACTTGCTATGAAG
AATATCAGCCGAGAAGTTATGGAGGTGTTTTacaaacatgtgcccaaaat
tGGTGAACTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTACATT
ACAAGCTGATGAATACTACCAATTACACGCAAGACTTTTTGGATCATGGA
GCGAACGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGCACC
TACTCTAGTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAGATG
AAATTGACGAGGAAGAAAGATTTGGTGGTTCCTCTACAGAAGAAATAGAT
GACGGCTTATTAGCAGTATTGAAAGAATGCAAAAATGTCAACCTAGTTGA
CCAGAATGGAATGTCTGCTGCACATCACGCCTCGCTTAAGAAAAAGCCTT
CTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTCTC
GATGTGAACGCGCAAGATGACAAAAATGGTCGCACAGTGTTACACAATCT
AGTAATGCTGGCATCAGGTGATTATGAAACAACCAATGAACTTGAAATAT
TGCTGATATCTCATGGCGCACTATTAGATGTTGAGTGTTCGCGCGGTCGC
TTCCCGATTCATTACGCATTCTTTGACAAATCAAACAGCAAGAAATTGGA
CTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTACTG
AATACAACCAATCTAAATTCAACATGAAAAATTACGTCAGTCATCAAGAC
AATGAGGGGAATACGCCGTTGCATTATGGGTGCCAACGTGGTGCGACTAT
CTCATGCATGCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACAGATA
AGAATGGAAACACGCCTTTGGCTATCGCATTGAAAAACAAGCATCATGGC
ACTGCTATGATGATGCTTATGGTGTACGAGAATAAACACGGTCAAAATGT
TTTACACATGATGTTGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTC
AATTGTTTCATAATATTCTGAAAAAGtGTAATTTGACCAAGGAGTTCAGC
AACAAGGTGGACAATAACGGTTTCACACCTTTGCTATCATTCGTCTACAA
CATTGCAAGTAAAAACCAGATGAAGAGAGCTCTACCGCAGTACACCAAGC
TTGTTAAAACTTTGTTGACAGAATGTTTCGTTGATACCGATATTCTGGTT
CAAAAGACGGCAATGGGACCTGACGACAAGCCTGCTCTACAATACACTTT
GAGGCCTAAACCCTCCCTGGATTACGAAAAATCagatgaaaatcaagaaa
agttCAAAGGTTACAACAGCTTTGGACAAATGAACATTTTCCATTTACTT
GCTATGAAGAATATCAGCCGAGAAGTTATGGAGGTGTTTTacaaacatgt
gcccaaaattGGTGAACTCCTGAATGCCAAAGATCTTCATGGTCGCACCC
CTTTACATTACAAGCTGATGAATACTACCAATTACACGCAAGACTTTTTG
GATCATGGAGCGAACGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGA
ACTGGCACCTACTCTAGTGATTGCGATGAAATCTTGGATTAAAATCACGA
AAGCAGATGAAATTGACGAGGAAGAAAGATTTGGTGGTTCCTCTACAGAA
GAAATAGATGACGGCTTATTAGCAGTATTGAAAGAATGCAAAAATGTCAA
CCTAGTTGACCAGAATGGAATGTCTGCTGCACATCACGCCTCGCTTAAGA
AAAAGCCTTCTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTCTTGAAA
GCTGGTCTCGATGTGAACGCGCAAGATGACAAAAATGGTCGCACAGTGTT
ACACAATCTAGTAATGCTGGCATCAGGTGATTATGAAACAACCAATGAAC
TTGAAATATTGCTGATATCTCATGGCGCACTATTAGATGTTGAGTGTTCG
CGCGGTCGCTTCCCGATTCATTACGCATTCTTTGACAAATCAAACAGCAA
GAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTT
TGTGTACTGAATACAACCAATCTAAATTCAACATGAAAAATTACGTCAGT
CATCAAGACAATGAGGGGAATACGCCGTTGCATTATGGGTGCCAACGTGG
TGCGACTATCTCATGCATGCAGttgaaaaagCTTGGTGCAGACGACAAGC
TGACAGATAAGAATGGAAACACGCCTTTGGCTATCGCATTGAAAAACAAG
CATCATGGCACTGCTATGATGATGCTTATGGTGTACGAGAATAAACACGG
TCAAAATGTTTTACACATGATGTTGGGAAAGCTGGAGCCAGAGGACAAGA
AAACTTTTCAATTGTTTCATAATATTCTGAAAAAGtGTAATTTGACCAAG
GAGTTCAGCAACAAGGTGGACAATAACGGTTTCACACCTTTGCTATCATT
CGTCTACAACATTGCAAGTAAAAACCAGATGAAGAGAGCTCTACCGCAGT
ACACCAAGCTTGTTAAAACTTTGTTGACAGAATGTTTCGTTGATACCGAT
ATTCTGGTTCAAAAGACGGCAATGGGACCTGACGACAAGCCTGCTCTACA
ATACACTTTGAGGCCTAAACCCTCCCTGGATTACGAAAAATCagatgaaa
atcaagaaaagttCAAAGGTTACAACAGCTTTGGACAAATGAACATTTTC
CATTTACTTGCTATGAAGAATATCAGCCGAGAAGTTATGGAGGTGTTTTa
caaacatgtgcccaaaattGGTGAACTCCTGAATGCCAAAGATCTTCATG
GTCGCACCCCTTTACATTACAAGCTGATGAATACTACCAATTACACGCAA
GACTTTTTGGATCATGGAGCGAACGTTGAAATAGGGTCAAGTAATAAGGA
GAAAGATGAACTGGCACCTACTCTAGTGATTGCGATGAAATCTTGGATTA
AAATCACGAAAGCAGATGAAATTGACGAGGAAGAAAGATTTGGTGGTTCC
TCTACAGAAGAAATAGATGACGGCTTATTAGCAGTATTGAAAGAATGCAA
AAATGTCAACCTAGTTGACCAGAATGGAATGTCTGCTGCACATCACGCCT
CGCTTAAGAAAAAGCCTTCTGTCAGCAAGAAAATTGCTATTTTCAAACGT
CTCTTGAAAGCTGGTCTCGATGTGAACGCGCAAGATGACAAAAATGGTCG
CACAGTGTTACACAATCTAGTAATGCTGGCATCAGGTGATTATGAAACAA
CCAATGAACTTGAAATATTGCTGATATCTCATGGCGCACTATTAGATGTT
GAGTGTTCGCGCGGTCGCTTCCCGATTCATTACGCATTCTTTGACAAATC
AAACAGCAAGAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCA
TTCATCTTTTGTGTACTGAATACAACCAATCTAAATTCAACATGAAAAAT
TACGTCAGTCATCAAGACAATGAGGGGAATACGCCGTTGCATTATGGGTG
CCAACGTGGTGCGACTATCTCATGCATGCAGttgaaaaagCTTGGTGCAG
ACGACAAGCTGACAGATAAGAATGGAAACACGCCTTTGGCTATCGCATTG
AAAAACAAGCATCATGGCACTGCTATGATGATGCTTATGGTGTACGAGAA
TAAACACGGTCAAAATGTTTTACACATGATGTTGGGAAAGCTGGAGCCAG
AGGACAAGAAAACTTTTCAATTGTTTCATAATATTCTGAAAAAGtGTAAT
TTGACCAAGGAGTTCAGCAACAAGGTGGACAATAACGGTTTCACACCTTT
GCTATCATTCGTCTACAACATTGCAAGTAAAAACCAGATGAAGAGAGCTC
TACCGCAGTACACCAAGCTTGTTAAAACTTTGTTGACAGAATGTTTCGTT
GATACCGATATTCTGGTTCAAAAGACGGCAATGGGACCTGACGACAAGCC
TGCTCTACAATACACTTTGAGGCCTAAACCCTCCCTGGATTACGAAAAAT
CagatgaaaatcaagaaaagttCAAAGGTTACAACAGCTTTGGACAAATG
AACATTTTCCATTTACTTGCTATGAAGAATATCAGCCGAGAAGTTATGGA
GGTGTTTTacaaacatgtgcccaaaattGGTGAACTCCTGAATGCCAAAG
ATCTTCATGGTCGCACCCCTTTACATTACAAGCTGATGAATACTACCAAT
TACACGCAAGACTTTTTGGATCATGGAGCGAACGTTGAAATAGGGTCAAG
TAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTGCGATGAAAT
CTTGGATTAAAATCACGAAAGCAGATGAAATTGACGAGGAAGAAAGATTT
GGTGGTTCCTCTACAGAAGAAATAGATGACGGCTTATTAGCAGTATTGAA
AGAATGCAAAAATGTCAACCTAGTTGACCAGAATGGAATGTCTGCTGCAC
ATCACGCCTCGCTTAAGAAAAAGCCTTCTGTCAGCAAGAAAATTGCTATT
TTCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAACGCGCAAGATGACAA
AAATGGTCGCACAGTGTTACACAATCTAGTAATGCTGGCATCAGGTGATT
ATGAAACAACCAATGAACTTGAAATATTGCTGATATCTCATGGCGCACTA
TTAGATGTTGAGTGTTCGCGCGGTCGCTTCCCGATTCATTACGCATTCTT
TGACAAATCAAACAGCAAGAAATTGGACTCGACAAACATTTGCGATCCCA
TGTCTCTCATTCATCTTTTGTGTACTGAATACAACCAATCTAAATTCAAC
ATGAAAAATTACGTCAGTCATCAAGACAATGAGGGGAATACGCCGTTGCA
TTATGGGTGCCAACGTGGTGCGACTATCTCATGCATGCAGttgaaaaagC
TTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACGCCTTTGGCT
ATCGCATTGAAAAACAAGCATCATGGCACTGCTATGATGATGCTTATGGT
GTACGAGAATAAACACGGTCAAAATGTTTTACACATGATGTTGGGAAAGC
TGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAATATTCTGAAA
AAGtGTAATTTGACCAAGGAGTTCAGCAACAAGGTGGACAATAACGGTTT
CACACCTTTGCTATCATTCGTCTACAACATTGCAAGTAAAAACCAGATGA
AGAGAGCTCTACCGCAGTACACCAAGCTTGTTAAAACTTTGTTGACAGAA
TGTTTCGTTGATACCGATATTCTGGTTCAAAAGACGGCAATGGGACCTGA
CGACAAGCCTGCTCTACAATACACTTTGAGGCCTAAACCCTCCCTGGATT
ACGAAAAATCagatgaaaatcaagaaaagttCAAAGGTTACAACAGCTTT
GGACAAATGAACATTTTCCATTTACTTGCTATGAAGAATATCAGCCGAGA
AGTTATGGAGGTGTTTTacaaacatgtgcccaaaattGGTGAACTCCTGA
ATGCCAAAGATCTTCATGGTCGCACCCCTTTACATTACAAGCTGATGAAT
ACTACCAATTACACGCAAGACTTTTTGGATCATGGAGCGAACGTTGAAAT
AGGGTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTG
CGATGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGACGAGGAA
GAAAGATTTGGTGGTTCCTCTACAGAAGAAATAGATGACGGCTTATTAGC
AGTATTGAAAGAATGCAAAAATGTCAACCTAGTTGACCAGAATGGAATGT
CTGCTGCACATCACGCCTCGCTTAAGAAAAAGCCTTCTGTCAGCAAGAAA
ATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAACGCGCA
AGATGACAAAAATGGTCGCACAGTGTTACACAATCTAGTAATGCTGGCAT
CAGGTGATTATGAAACAACCAATGAACTTGAAATATTGCTGATATCTCAT
GGCGCACTATTAGATGTTGAGTGTTCGCGCGGTCGCTTCCCGATTCATTA
CGCATTCTTTGACAAATCAAACAGCAAGAAATTGGACTCGACAAACATTT
GCGATCCCATGTCTCTCATTCATCTTTTGTGTACTGAATACAACCAATCT
AAATTCAACATGAAAAATTACGTCAGTCATCAAGACAATGAGGGGAATAC
GCCGTTGCATTATGGGTGCCAACGTGGTGCGACTATCTCATGCATGCAGt
tgaaaaagCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACG
CCTTTGGCTATCGCATTGAAAAACAAGCATCATGGCACTGCTATGATGAT
GCTTATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACACATGATGT
TGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAAT
ATTCTGAAAAAGtGTAATTTGACCAAGGAGTTCAGCAACAAGGTGGACAA
TAACGGTTTCACACCTTTGCTATCATTCGTCTACAACATTGCAAGTAAAA
ACCAGATGAAGAGAGCTCTACCGCAGTACACCAAGCTTGTTAAAACTTTG
TTGACAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAAGACGGCAAT
GGGACCTGACGACAAGCCTGCTCTACAATACACTTTGAGGCCTAAACCCT
CCCTGGATTACGAAAAATCagatgaaaatcaagaaaagttCAAAGGTTAC
AACAGCTTTGGACAAATGAACATTTTCCATTTACTTGCTATGAAGAATAT
CAGCCGAGAAGTTATGGAGGTGTTTTacaaacatgtgcccaaaattGGTG
AACTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTACATTACAAG
CTGATGAATACTACCAATTACACGCAAGACTTTTTGGATCATGGAGCGAA
CGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTC
TAGTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATT
GACGAGGAAGAAAGATTTGGTGGTTCCTCTACAGAAGAAATAGATGACGG
CTTATTAGCAGTATTGAAAGAATGCAAAAATGTCAACCTAGTTGACCAGA
ATGGAATGTCTGCTGCACATCACGCCTCGCTTAAGAAAAAGCCTTCTGTC
AGCAAGAAAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTCTCGATGT
GAACGCGCAAGATGACAAAAATGGTCGCACAGTGTTACACAATCTAGTAA
TGCTGGCATCAGGTGATTATGAAACAACCAATGAACTTGAAATATTGCTG
ATATCTCATGGCGCACTATTAGATGTTGAGTGTTCGCGCGGTCGCTTCCC
GATTCATTACGCATTCTTTGACAAATCAAACAGCAAGAAATTGGACTCGA
CAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTACTGAATAC
AACCAATCTAAATTCAACATGAAAAATTACGTCAGTCATCAAGACAATGA
GGGGAATACGCCGTTGCATTATGGGTGCCAACGTGGTGCGACTATCTCAT
GCATGCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACAGATAAGAAT
GGAAACACGCCTTTGGCTATCGCATTGAAAAACAAGCATCATGGCACTGC
TATGATGATGCTTATGGTGTACGAGAATAAACACGGTCAAAATGTTTTAC
ACATGATGTTGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTG
TTTCATAATATTCTGAAAAAGtGTAATTTGACCAAGGAGTTCAGCAACAA
GGTGGACAATAACGGTTTCACACCTTTGCTATCATTCGTCTACAACATTG
CAAGTAAAAACCAGATGAAGAGAGCTCTACCGCAGTACACCAAGCTTGTT
AAAACTTTGTTGACAGAATGTTTCGTTGATACCGATATTCTGGTTCAAAA
GACGGCAATGGGACCTGACGACAAGCCTGCTCTACAATACACTTTGAGGC
CTAAACCCTCCCTGGATTACGAAAAATCagatgaaaatcaagaaaagttC
AAAGGTTACAACAGCTTTGGACAAATGAACATTTTCCATTTACTTGCTAT
GAAGAATATCAGCCGAGAAGTTATGGAGGTGTTTTacaaacatgtgccca
aaattGGTGAACTCCTGAATGCCAAAGATCTTCATGGTCGCACCCCTTTA
CATTACAAGCTGATGAATACTACCAATTACACGCAAGACTTTTTGGATCA
TGGAGCGAACGTTGAAATAGGGTCAAGTAATAAGGAGAAAGATGAACTGG
CACCTACTCTAGTGATTGCGATGAAATCTTGGATTAAAATCACGAAAGCA
GATGAAATTGACGAGGAAGAAAGATTTGGTGGTTCCTCTACAGAAGAAAT
AGATGACGGCTTATTAGCAGTATTGAAAGAATGCAAAAATGTCAACCTAG
TTGACCAGAATGGAATGTCTGCTGCACATCACGCCTCGCTTAAGAAAAAG
CCTTCTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTCTTGAAAGCTGG
TCTCGATGTGAACGCGCAAGATGACAAAAATGGTCGCACAGTGTTACACA
ATCTAGTAATGCTGGCATCAGGTGATTATGAAACAACCAATGAACTTGAA
ATATTGCTGATATCTCATGGCGCACTATTAGATGTTGAGTGTTCGCGCGG
TCGCTTCCCGATTCATTACGCATTCTTTGACAAATCAAACAGCAAGAAAT
TGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGT
ACTGAATACAACCAATCTAAATTCAACATGAAAAATTACGTCAGTCATCA
AGACAATGAGGGGAATACGCCGTTGCATTATGGGTGCCAACGTGGTGCGA
CTATCTCATGCATGCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACA
GATAAGAATGGAAACACGCCTTTGGCTATCGCATTGAAAAACAAGCATCA
TGGCACTGCTATGATGATGCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017157XLOC_017157Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030005-exon-sc0000782-1491911889:6817..7285TCONS_00030005-exon-sc0000782-1491911889:6817..7285Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:6817..7285TCONS_00030005-exon-sc0000782-1510915933:6817..7285Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:6817..7285TCONS_00030005-exon-sc0000782-1575043694:6817..7285Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:8263..8466TCONS_00030005-exon-sc0000782-1491911889:8263..8466Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:8263..8466TCONS_00030005-exon-sc0000782-1510915933:8263..8466Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:8263..8466TCONS_00030005-exon-sc0000782-1575043694:8263..8466Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:9623..10020TCONS_00030005-exon-sc0000782-1491911889:9623..10020Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:9623..10020TCONS_00030005-exon-sc0000782-1510915933:9623..10020Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:9623..10020TCONS_00030005-exon-sc0000782-1575043694:9623..10020Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:10262..10392TCONS_00030005-exon-sc0000782-1491911889:10262..10392Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:10262..10392TCONS_00030005-exon-sc0000782-1510915933:10262..10392Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:10262..10392TCONS_00030005-exon-sc0000782-1575043694:10262..10392Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:11505..11742TCONS_00030005-exon-sc0000782-1491911889:11505..11742Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:11505..11742TCONS_00030005-exon-sc0000782-1510915933:11505..11742Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:11505..11742TCONS_00030005-exon-sc0000782-1575043694:11505..11742Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:12219..12402TCONS_00030005-exon-sc0000782-1491911889:12219..12402Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:12219..12402TCONS_00030005-exon-sc0000782-1510915933:12219..12402Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:12219..12402TCONS_00030005-exon-sc0000782-1575043694:12219..12402Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:12922..12998TCONS_00030005-exon-sc0000782-1491911889:12922..12998Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:12922..12998TCONS_00030005-exon-sc0000782-1510915933:12922..12998Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:12922..12998TCONS_00030005-exon-sc0000782-1575043694:12922..12998Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1491911889:13295..13315TCONS_00030005-exon-sc0000782-1491911889:13295..13315Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1510915933:13295..13315TCONS_00030005-exon-sc0000782-1510915933:13295..13315Clytia hemisphaericaexon
TCONS_00030005-exon-sc0000782-1575043694:13295..13315TCONS_00030005-exon-sc0000782-1575043694:13295..13315Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030005-proteinTCONS_00030005-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000782supercontigsc0000782:6817..13315 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.14742	1.44501	2.85308	2.07902	6.76418	5.08193	8.09335	9.61924	4.68472	5.79425	6.77232	3.32456	4.8121	5.35611	2.51345	5.39333	2.92219	4.14085	4.73145	3.40056	2.42343	3.01542	1.95316	1.64695	5.83403	5.91658	2.14099	2.654	2.13101	1.78594
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00030005 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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