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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030008 ID=TCONS_00030008|Name=TCONS_00030008|organism=Clytia hemisphaerica|type=transcript|length=859bp
gtcATTTTACCATTCTTGACACTGGATTAATTCATAACTCAAGAACGCTt
aataaatttcaagaaaagatCTTGGTTATCTTTTTCAGTGACCGGAATGT
TCCGCGTGGCATGTCAAGAAGACACTAAAAATTACCGAACAGATCTCAAG
AACAAGCGTTTGCTATTCCACGGAACTAAAATGGCGCATATCATGAGTAT
TTTAAAGAATGGTCTGCAAATTGCACCCGAAGGATCGATCCGAAGCGGCA
GCGCTTATGGAAAGGGAATTTATTTCAGTTATGATTTTGAGACATCGAAT
AATTATGCAAAAGGCAAACAGAACAAGTACATGTTTTTATGTGAGGTATC
ACTCGGCAAATCGTACGACAAGGGGAGAAATCACAGAGGAGAATCATatc
caatgaaaaaaacacaaagTACTTGGGTACAGACACAAGAAATTCCTAAC
CCCGACAAACATGTGACCATGCCATACGGAGCTAGTCTATTGTTAGGATG
TATGTCTTTTTTTATgtatatctttttttctttttttttaaatattcgcG
AAGTCATTCTTTGTTGCCTATCGTTCTTGTTTCAGTTTCCGTATTCGTTC
TTGTTCTGTTCACagtggcccttcgtggaaacaattctccagctgcctaa
aagcttttgaatttttcgNTGCCATACGGAGCTAGTCTATTGTTAggaga
aaatattcaaaacccTGGCACCAGTAAAGATGACAATCGATATTATTATT
CCTACAATCAACCAGAAATCATTGTGTACGATGCGAAACAAGTTAAGATT
AGATACATCATCCAATACAAATAAACATGGCAAATTTGAGCCTTTGACCC
TTAGGACCC Run BLAST on NCBI protein sequence of TCONS_00030008-protein >TCONS_00030008-protein ID=TCONS_00030008-protein|Name=TCONS_00030008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
MFRVACQEDTKNYRTDLKNKRLLFHGTKMAHIMSILKNGLQIAPEGSIRS
GSAYGKGIYFSYDFETSNNYAKGKQNKYMFLCEVSLGKSYDKGRNHRGES
YPMKKTQSTWVQTQEIPNPDKHVTMPYGASLLLGCMSFFMYIFFSFFLNI
REVILCCLSFLFQFPYSFLFCSQWPFVETILQLPKSF Run BLAST on NCBI transcript from alignment at sc0000782:30925..33353+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030008 ID=TCONS_00030008|Name=TCONS_00030008|organism=Clytia hemisphaerica|type=transcript|length=2429bp|location=Sequence derived from alignment at sc0000782:30925..33353+ (Clytia hemisphaerica)
gtcATTTTACCATTCTTGACACTGGATTAATTCATAACTCAAGAACGCTt
aataaatttcaagaaaagatCTTGGTTATCTTTTTCAGGTGAggcacaaa
attttgaaattaatatgGTTTTAAACTTGCTGTCTCTTCACAAGGAAAAT
AAGCAAAATTCCAATCTTGCGCGCACGAAAATTTACCTCTCTTTCTCTCG
TTTTTCTTAGTGACCGGAATGTTCCGCGTGGCATGTCAAGAAGACACTAA
AAATTACCGAACAGATCTCAAGAACAAGCGTTTGCTATTCCACGGAACTA
AAATGGCGCATATCATGAGTATTTTAAAGAATGGTCTGCAAATTGCACCC
GAAGGATCGATCCGAAGCGGCAGCGCTTATGGAAAGGTAACAAACACGAT
ACAGAttgtcccagctggcacacaaggttgtttcaacttttctttaacgt
tcacaacgaccattaaacgttagatgaacgttgaaacaacgttgtgtgcc
agctgggacgtAGTATGTTTTGGACTTTTAGTGACTGTTTTGTTTAAACT
TTGGTTCAATAACCTGAAATGTTATTAAAGAATTGAAGCAATgtgctgtt
ccattaaaaatccatcaaggaggggggggggtaaacaaaccttttaaaat
aaaaaataattcgtGGAAATGTGTGGCAAAATGGCAACATTTATAAAGAA
ACTCTTAGAAAAATTAACTTCATACTTTGAGTtgacggtggacgaactaa
aaccaGTCTTTTACCCTCTGGAGATTTTTGAATAGGTTTTAACCcctaga
aaaattttaaaacatttctttgacccctggaaattcttctctcGCTGTTT
GGATACAAAATGGGATGGCAAGAAACATGGGAAATCCAATCCTTTATTTC
ATCGATGCAATACACCTAACAACCCTTACAATGCGGTCAGTATTTGAGAG
GATTGGTAATGAATTTGCAAAGGTTTGTGGGACGGCAAGTCTACTGATGA
TATGATCTTTCTATTTTCCAGGGAATTTATTTCAGTTATGATTTTGAGAC
ATCGAATAATTATGCAAAAGGCAAACAGAACAAGTACATGTTTTTATGTG
AGGTAAGAATCTTCAAACAGTAtaaggccaaaatattaagaacaagtcaa
tgaaatttaaagtccctgccaacaagaaactctcataaataaCGCTTCCC
NCAAGGCAAACAGAACAAGTACATGGTTTTATGTGAGGTAAGAATCTTCA
AACAGTAtaaggccaaaatattaagaacaagtcaatgaaatttaaagtcc
ctgccaacaagaaactctcataaatgatgcttccttattcgataagctcc
cttttATTCGGTGAAAATTCAATTCcccttaaagatcgaattagggagcg
tcaactgtaattatttttttgattatcGGACTTTTTGATAGAGTGGTTTC
AAGATACCTTCTCCAAAAAAGAGTCTCCGCGACCTTTTCCCTTGGATCTT
AAGCGACACAAGAAAGCCTAAGCAGCGTAAAGGCCCAGCAGTGTTGGCAG
TGTCAATATATATTTCGTCGCAGAGTATCGCCATACAACTCAATTTACAg
gagtgaaatttttcaatgtaTAGACTCGAGTCGGGAGAGAAATAAAGATT
TAGTTGCATTGATTTTTTTAGATAACTCTTACTAATCAAGAAAGGAAGAT
TTGAACATATAACTTAAGCATGCGCACAGTAGAAAATTAGATAAttcgat
tttagcctggaatcgtcaattgataattgcgcgcataggccccgacaaag
tcaaATCTTTTCGACCAGTTGCGTTTTAAAGGCCCATCCCGCTGCGCGCT
GGGCCAATTACGGTCTATCATTCTTTGGCCTCTTAAGGAATGTTCTTATT
CACTTTACTATGCAGGTATCACTCGGCAAATCGTACGACAAGGGGAGAAA
TCACAGAGGAGAATCATatccaatgaaaaaaacacaaagTACTTGGGTAC
AGACACAAGAAATTCCTAACCCCGACAAACATGTGACCATGCCATACGGA
GCTAGTCTATTGTTAGGATGTATGTCTTTTTTTATgtatatctttttttc
tttttttttaaatattcgcGAAGTCATTCTTTGTTGCCTATCGTTCTTGT
TTCAGTTTCCGTATTCGTTCTTGTTCTGTTCACagtggcccttcgtggaa
acaattctccagctgcctaaaagcttttgaatttttcgNTGCCATACGGA
GCTAGTCTATTGTTAggagaaaatattcaaaacccTGGCACCAGTAAAGA
TGACAATCGATATTATTATTCCTACAATCAACCAGAAATCATTGTGTACG
ATGCGAAACAAGTTAAGATTAGATACATCATCCAATACAAATAAACATGG
CAAATTTGAGCCTTTGACCCTTAGGACCC Coding sequence (CDS) from alignment at sc0000782:30925..33353+ >TCONS_00030008 ID=TCONS_00030008|Name=TCONS_00030008|organism=Clytia hemisphaerica|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000782:30925..33353+ (Clytia hemisphaerica)
ATGTTCCGCGTGGCATGTCAAGAAGACACTAAAAATTACCGAACAGATCT
CAAGAACAAGCGTTTGCTATTCCACGGAACTAAAATGGCGCATATCATGA
GTATTTTAAAGAATGGTCTGCAAATTGCACCCGAAGGATCGATCCGAAGC
GGCAGCGCTTATGGAAAGGGAATTTATTTCAGTTATGATTTTGAGACATC
GAATAATTATGCAAAAGGCAAACAGAACAAGTACATGTTTTTATGTGAGG
TATCACTCGGCAAATCGTACGACAAGGGGAGAAATCACAGAGGAGAATCA
TatccaatgaaaaaaacacaaagTACTTGGGTACAGACACAAGAAATTCC
TAACCCCGACAAACATGTGACCATGCCATACGGAGCTAGTCTATTGTTAG
GATGTATGTCTTTTTTTATgtatatctttttttctttttttttaaatatt
cgcGAAGTCATTCTTTGTTGCCTATCGTTCTTGTTTCAGTTTCCGTATTC
GTTCTTGTTCTGTTCACagtggcccttcgtggaaacaattctccagctgc
ctaaaagcttttgaATGTTCCGCGTGGCATGTCAAGAAGACACTAAAAAT
TACCGAACAGATCTCAAGAACAAGCGTTTGCTATTCCACGGAACTAAAAT
GGCGCATATCATGAGTATTTTAAAGAATGGTCTGCAAATTGCACCCGAAG
GATCGATCCGAAGCGGCAGCGCTTATGGAAAGGGAATTTATTTCAGTTAT
GATTTTGAGACATCGAATAATTATGCAAAAGGCAAACAGAACAAGTACAT
GTTTTTATGTGAGGTATCACTCGGCAAATCGTACGACAAGGGGAGAAATC
ACAGAGGAGAATCATatccaatgaaaaaaacacaaagTACTTGGGTACAG
ACACAAGAAATTCCTAACCCCGACAAACATGTGACCATGCCATACGGAGC
TAGTCTATTGTTAGGATGTATGTCTTTTTTTATgtatatctttttttctt
tttttttaaatattcgcGAAGTCATTCTTTGTTGCCTATCGTTCTTGTTT
CAGTTTCCGTATTCGTTCTTGTTCTGTTCACagtggcccttcgtggaaac
aattctccagctgcctaaaagcttttgaATGTTCCGCGTGGCATGTCAAG
AAGACACTAAAAATTACCGAACAGATCTCAAGAACAAGCGTTTGCTATTC
CACGGAACTAAAATGGCGCATATCATGAGTATTTTAAAGAATGGTCTGCA
AATTGCACCCGAAGGATCGATCCGAAGCGGCAGCGCTTATGGAAAGGGAA
TTTATTTCAGTTATGATTTTGAGACATCGAATAATTATGCAAAAGGCAAA
CAGAACAAGTACATGTTTTTATGTGAGGTATCACTCGGCAAATCGTACGA
CAAGGGGAGAAATCACAGAGGAGAATCATatccaatgaaaaaaacacaaa
gTACTTGGGTACAGACACAAGAAATTCCTAACCCCGACAAACATGTGACC
ATGCCATACGGAGCTAGTCTATTGTTAGGATGTATGTCTTTTTTTATgta
tatctttttttctttttttttaaatattcgcGAAGTCATTCTTTGTTGCC
TATCGTTCTTGTTTCAGTTTCCGTATTCGTTCTTGTTCTGTTCACagtgg
cccttcgtggaaacaattctccagctgcctaaaagcttttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030008-exon-sc0000782-1491911889:30925..31012 | TCONS_00030008-exon-sc0000782-1491911889:30925..31012 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1510915933:30925..31012 | TCONS_00030008-exon-sc0000782-1510915933:30925..31012 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1575043694:30925..31012 | TCONS_00030008-exon-sc0000782-1575043694:30925..31012 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1491911889:31135..31310 | TCONS_00030008-exon-sc0000782-1491911889:31135..31310 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1510915933:31135..31310 | TCONS_00030008-exon-sc0000782-1510915933:31135..31310 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1575043694:31135..31310 | TCONS_00030008-exon-sc0000782-1575043694:31135..31310 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1491911889:31946..32026 | TCONS_00030008-exon-sc0000782-1491911889:31946..32026 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1510915933:31946..32026 | TCONS_00030008-exon-sc0000782-1510915933:31946..32026 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1575043694:31946..32026 | TCONS_00030008-exon-sc0000782-1575043694:31946..32026 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1491911889:32840..33353 | TCONS_00030008-exon-sc0000782-1491911889:32840..33353 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1510915933:32840..33353 | TCONS_00030008-exon-sc0000782-1510915933:32840..33353 | Clytia hemisphaerica | exon |
| TCONS_00030008-exon-sc0000782-1575043694:32840..33353 | TCONS_00030008-exon-sc0000782-1575043694:32840..33353 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000782 | supercontig | sc0000782:30925..33353 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012317 | Poly(ADP-ribose)pol_cat_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003950 | NAD+ ADP-ribosyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003950 |
NAD+ ADP-ribosyltransferase activity |
Blast
The following BLAST results are available for this feature:
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