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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030009 ID=TCONS_00030009|Name=TCONS_00030009|organism=Clytia hemisphaerica|type=transcript|length=527bp
GGTTTTATGTGAGGTATCACTCGGCAAATCGTACGACAAGGGGAGAAATC
ACAGAGGAGAATCATatccaatgaaaaaaacacaaagTACTTGGGTACAG
ACACAAGAAATTCCTAACCCCGACAAACATGTGACCATGCCATACGGAGC
TAGTCTATTGTTAGGATGTATGTCTTTTTTTATgtatatctttttttctt
tttttttaaatattcgcGAAGTCATTCTTTGTTGCCTATCGTTCTTGTTT
CAGTTTCCGTATTCGTTCTTGTTCTGTTCACagtggcccttcgtggaaac
aattctccagctgcctaaaagcttttgaatttttcgNTGCCATACGGAGC
TAGTCTATTGTTAggagaaaatattcaaaacccTGGCACCAGTAAAGATG
ACAATCGATATTATTATTCCTACAATCAACCAGAAATCATTGTGTACGAT
GCGAAACAAGTTAAGATTAGATACATCATCCAATACAAATAAACATGGCA
AATTTGAGCCTTTGACCCTTAGGACCC Run BLAST on NCBI transcript from alignment at sc0000782:32149..33353+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030009 ID=TCONS_00030009|Name=TCONS_00030009|organism=Clytia hemisphaerica|type=transcript|length=1205bp|location=Sequence derived from alignment at sc0000782:32149..33353+ (Clytia hemisphaerica)
GGTTTTATGTGAGGTAAGAATCTTCAAACAGTAtaaggccaaaatattaa
gaacaagtcaatgaaatttaaagtccctgccaacaagaaactctcataaa
tgatgcttccttattcgataagctcccttttATTCGGTGAAAATTCAATT
Ccccttaaagatcgaattagggagcgtcaactgtaattatttttttgatt
atcGGACTTTTTGATAGAGTGGTTTCAAGATACCTTCTCCAAAAAAGAGT
CTCCGCGACCTTTTCCCTTGGATCTTAAGCGACACAAGAAAGCCTAAGCA
GCGTAAAGGCCCAGCAGTGTTGGCAGTGTCAATATATATTTCGTCGCAGA
GTATCGCCATACAACTCAATTTACAggagtgaaatttttcaatgtaTAGA
CTCGAGTCGGGAGAGAAATAAAGATTTAGTTGCATTGATTTTTTTAGATA
ACTCTTACTAATCAAGAAAGGAAGATTTGAACATATAACTTAAGCATGCG
CACAGTAGAAAATTAGATAAttcgattttagcctggaatcgtcaattgat
aattgcgcgcataggccccgacaaagtcaaATCTTTTCGACCAGTTGCGT
TTTAAAGGCCCATCCCGCTGCGCGCTGGGCCAATTACGGTCTATCATTCT
TTGGCCTCTTAAGGAATGTTCTTATTCACTTTACTATGCAGGTATCACTC
GGCAAATCGTACGACAAGGGGAGAAATCACAGAGGAGAATCATatccaat
gaaaaaaacacaaagTACTTGGGTACAGACACAAGAAATTCCTAACCCCG
ACAAACATGTGACCATGCCATACGGAGCTAGTCTATTGTTAGGATGTATG
TCTTTTTTTATgtatatctttttttctttttttttaaatattcgcGAAGT
CATTCTTTGTTGCCTATCGTTCTTGTTTCAGTTTCCGTATTCGTTCTTGT
TCTGTTCACagtggcccttcgtggaaacaattctccagctgcctaaaagc
ttttgaatttttcgNTGCCATACGGAGCTAGTCTATTGTTAggagaaaat
attcaaaacccTGGCACCAGTAAAGATGACAATCGATATTATTATTCCTA
CAATCAACCAGAAATCATTGTGTACGATGCGAAACAAGTTAAGATTAGAT
ACATCATCCAATACAAATAAACATGGCAAATTTGAGCCTTTGACCCTTAG
GACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030009-exon-sc0000782-1491911889:32149..32161 | TCONS_00030009-exon-sc0000782-1491911889:32149..32161 | Clytia hemisphaerica | exon |
| TCONS_00030009-exon-sc0000782-1510915933:32149..32161 | TCONS_00030009-exon-sc0000782-1510915933:32149..32161 | Clytia hemisphaerica | exon |
| TCONS_00030009-exon-sc0000782-1575043694:32149..32161 | TCONS_00030009-exon-sc0000782-1575043694:32149..32161 | Clytia hemisphaerica | exon |
| TCONS_00030009-exon-sc0000782-1491911889:32840..33353 | TCONS_00030009-exon-sc0000782-1491911889:32840..33353 | Clytia hemisphaerica | exon |
| TCONS_00030009-exon-sc0000782-1510915933:32840..33353 | TCONS_00030009-exon-sc0000782-1510915933:32840..33353 | Clytia hemisphaerica | exon |
| TCONS_00030009-exon-sc0000782-1575043694:32840..33353 | TCONS_00030009-exon-sc0000782-1575043694:32840..33353 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000782 | supercontig | sc0000782:32149..33353 + |
Blast
The following BLAST results are available for this feature:
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