TCONS_00030757 (transcript) - C. hemisphaerica

Overview
NameTCONS_00030757
Unique NameTCONS_00030757
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1615

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00030757 ID=TCONS_00030757|Name=TCONS_00030757|organism=Clytia hemisphaerica|type=transcript|length=1615bp
GCCTCttgggcttggaagtcaatgataTGCTGTGTCCAAATTGGAATGTA
AAACCCCGTAGGGATTGATCgcggagagaaaaaaattatgaaagaaCAAA
TTTCAAatGGTAGGTCCACCGTATTTTACAATGATAATCAATATAATCAA
TTCTACTCAAGTCGTCAAAGGGACAAAAGATCAATGGCTGTTGGATCTTT
AGAAGAAAATCTTTGTCGGGATATCGCCTCCTGGTGTTCAGAATATATCA
TTTATTGTTCCTACCCATATGTTTCAAACAATTGCCAAAAGACATGTCAA
GTTTGCAAGGATTACGCTGATGGATGTGAGGACAAAGCTGAATGGTGTCC
TGGATACAAAGCTTATTGTAAAGATGTGCCTTACATCCAAGAAAATTGCC
CAAAGTCCTGTGAGAAATGCCCACAAGTTGGGACTGGTGAACCGACAACT
TGCAGAGACCGTTCCTCGAGATGTTCTTCATACAGTCATATTTGCTACCA
AGATAAATATctaaactttatgaaaactaatTGTGAGAATACATGCCGAT
TCTGTGAAGGAGATTGCGGAATAGCagaacaacggaaactcgcatCTGCA
TCCAGTGTCGTACAAGGTGAAAGTGCACCGGTTGGATACTACCCTTGGCA
AGCGGGTATCTACTTTGATGGTGATTTTCTATGTGGAGGGACGCTTATCG
ATAGGACACACTTGTTGTCGGCTGCACATTGCTTTTATGTGTTAGATCGC
GATGATTTAACGAAATACAAAGTAGTATTGGGTGATAACAACAAAGATGT
TAATGAAGGTATGGAACAAAGAATCACAATCTCGAATATGACGTTACACG
AAAATTATGAAACGCAAACCTACAAAAACGATATTGCTATACTTGAACTA
TCGATCCCAGCTGAGCTCAACAACTTCGTCAACACAATCTGTTTACCTGA
TTACAGTGTAGAATTACCAGTTGGAAAGAAATGCTTCGTCACAGGTTGGG
GTAAAACATCAGTCATTAGTTACACGTCCAACCTTTTACAAGCTGAGCTC
CCAGTGGTCGACACAGAAACATGTGCTACCCGAAATTCATTCAATAACCA
CGTGGTCACTACCGACATGCTTTGCGCTGGATATAACAATGGTTTCACAT
ACGCATCAGCATGTCATGGTGATTCTGGTGGTCCTTTCCAATGCGAAGAT
CCTGATTCTAAGAAATGGTTTTTATATGGTGTCGTGAGTTGGGGGTCACC
CCAGTGTAATGGACTTGATTCATATACTGTTTTTACAAAAGTTAGTAAAT
ATATTTCATggatttataagaacaagactTAAGAAGAAATAACTAAtgta
aattacagaccagatcAGTTGTTATGCAATACCCCCATCATCTGTTTACA
GGTTATTGATCCGGCTTATACAAATAGGACTTCATTTATCTGTTTTCTAT
CAACAAACACTTTCACCGTGTTGACAAATCATTACAACTGTTTACATGAC
CTTCTGAAATTTATCAAGTATTATTTGTGGTGAGAAATGTGGAAGGATGT
CTGTCATTATGTTCCTCGCCtcactacatgtttttttataaaaacatcca
aattttttgaagcca
Run BLAST on NCBI

transcript from alignment at sc0000845:38542..46253-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00030757 ID=TCONS_00030757|Name=TCONS_00030757|organism=Clytia hemisphaerica|type=transcript|length=7712bp|location=Sequence derived from alignment at sc0000845:38542..46253- (Clytia hemisphaerica)
GCCTCTTGGGCTTGGAAGTCAATGATATGCTGTGTCCAAATTGGAATGTA
AAACCCCGTAGGGATTGATCGCGGAGAGAAAAAAATTATGAAAGAACAAA
TTTCAAGTGAGTCATTTACAACCAAAAAGTATTGTATTTTAGCGTAGGAG
AAAGAAAAAAAACCAGTCAAATGGCGATACAAAAGCTAACAGTCTAGAGG
GGGTAAAGAATTTGGTCAATGAGTCTATTATTAACCATAATAACAACATC
ATCAATTAAAACTTCCAAAATAAAATCTTTCGTCATAAGACTTTTGATAG
ACCTTGGTTCACACATCCTACCAATAACAAGTTTAAAACCCTGTTAAAAC
TGACAATTTAGAGGGTTCTAATGACAAACTGACTTTTTTGAAATAAATTT
TGTCATTATGGGACTAACATTTGGAGACTTATATTTTCTGATTGTTACAT
TATCGACGTATCAAGCAGCTTCTAATATTGATACTTTAGCAAGGAAAGGT
AAACTTTTAACCCGAAAAATAATAGCGGAATCTTTTCTTTTTAGTTTTGG
ACACTAATTGGCTTTGGCCCTCAGAATCGAGGATGAGTGCAGCCTTAACT
TCCCAAATTCCTATACGTAAAGTTAGATTTAAGTGCAAGACCGGGGGGGG
GTACTAGGGTTGGTAAATGAGGGGTATGTGCGGACGGGACCTCTGAAAAC
CGACCCTTAGAGAGACCAAATTTTAGTGAAAAAGTGACCCTAAGGGAGAC
TTTTTCGAAAAATTTTCTCTGATTTTCAAAAATTTCCTACCCTTAGTGAG
ACTTTTTTGTAATTTTTTCTCTCAAGATCAAAATTTTTTTCTAAAAATCG
TGATTTTTCCCACCCTTAGAGAGACTATTTCCTGATTTTTGTAACCCTTA
GAGAGACTTTGAACAAGGACACCTATTTTTGCCTAAGTACCCCCCCCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAGTCCCCCCCCCCCCGGGGCGCAAGACTCTG
CCGTATGCAGCGGTTGGGAGTTGGATTAAGATAAAGGCTAATAAATTACT
GATGTTTTTGATTTTTATAGATGGTAGGTCCACCGTATTTTACAATGATA
ATCAATATAATCAATTCTACTCAAGTCGTCAAAGGGACAAAAGATCAATG
GCTGTTGGATCTTTAGAAGGTGAGACTTAAAATCTGGTCCTTATGTAGTA
TTTAAGTAGTTTGTACTGCCATGAACATTGAATAAGCTTTTTCAAAGGAC
TTCAAAAACATCGAGAGTAAAGCCTTCGTAGGAGAATCAAAATCTTAAGT
TTGTTCATCTATCAATACGCCGCAATCATCTAATCGATAAAGCCCTAAAA
ATACACCCCTGTTTCACATACCTATTCCACTGGAAAATTTGGAAAATTTT
TGTCCTCGTTGGAAAAAAAATACCCTAAAATTTCAGTCTCACTCGGAAAT
TGACTTTGCTTTCATCCCTATCCGAAATTGCGAGAAGTTGAATTCCGAAA
CCATCCCCCCCCCCCCCCCCCCCCCATTTTAAGCTGGTAAGAATAGAATT
TCTAACCACATTGAAATTTCGATAGAAAATTTTATCCCCACTGTGAGCAG
AAGTTTCACTGGGGCTGTGAGGCTAGATGTTTTTTAATAAACTAATATTT
CTTTTACCCTAGAAAATCTTTGTCGGGATATCGCCTCCTGGTGTTCAGAA
TATATCATTTATTGTTCCTACCCATATGTTTCAAACAATTGCCAAAAGAC
ATGTCAAGTTTGCAAGGATTACGGTAAGAAAACCGTTGAACCCCGGTTGC
TAATTATATTTGAACATTTTAAGTACTAAATAGACTTAAAATGGAGACAA
GTCAACAAGAAAGAAAAGATCTACAAAAATGGATTAACTTTTAATCCCTG
CTTTTTCCCGCTTCTTTTATTGAAATTTGTGCATCTTTTAATCTATGGCA
ACTAATGAAAACAAGTAAAATATTCAGGGTCGGTTGACAAATCTTTATAG
ATTTAGAAAGAAAATTAGAAAAGAAATTAGCGTTGGAGGCTTACATGAAA
GAAACAGTGAGATTTACTACGATAATCTAATCATGCTTTGACGATATTCA
AACTATTGGAAAAAAGGGACAATAATACGACTCAAGTGCATTGCATATAA
AAATTCAACTTCTTATAATTTAACATGTTTTTGTTACAGAAAGTCTCTGT
ATGACAGAGAGGATTTTTTACTTTCGAGAGCTCGACTTGCTGTGCCAGTC
AATAGTATGTGGTTGAAAGTCCTATTCAGGCACTGCTCAACAACGAGGCG
ATCCTTTGAGTAAGATGTTCTCAAACAGGACAGATTTGCTTGAAAATCAT
TTTGACTGGGTAGGTATCGAGACAAATACAAAGGCTAAACAGAAGCGTAC
ACGGTTTCATCTTCAACGTGACTTTGTTTTTTTTTGGAAATTCTCCATTC
TGATTACATTTCTTAAATGGCGAGTTTAAAAAAAAAGAACTTCTTGGGTG
AAATTAAGGTATGACAGAAAACAAATTGAGACAGTGTTAGCGAAAGACAG
ACAGCGTTAAAACAAAAGAAAATAAAAGAAAATGTTGTCAAAGTCAACTT
TGGAAATGGACGGTTTTCTTCCTCTTATAAAGTATGAAGTCAATCGAAAC
ACGATCCACGTGCGAATCAAGCAACAAAATGCAAACATCGGACTATGAAG
GAAAGCGAGCGAGTTTCTTCCTCTTCGTAAGTAAGAAATCAATAGAAACA
TGATCCACGTGCGAATCTAACGACAAAACGTAAACATCGGAGCATTGAAG
AACGGAAGAATTTCTCAACGTTTCCGTTCCTCATTTTACATGGTCTTGAT
CAATATTTACTCCCAGCAAATGCCTTTCAATGCATTTTGGAAATTATGAT
AGCCATACAAGAGCAAGCAAGATTTAAATGACTTTCAATCAATCAGCGTT
TAAAACTTATCATTTGATTTATGTTCTAGCTAAGGAGTCATAAATATTAC
TTGAAAAAAATATGAAGTTGTTAGTTGGTGTGACATGGCTTCTTTTAATT
TTCTTGTCTGCTAAAGGTGAGATTTGTAATACCCCTGTCTCAGTTCTTTG
GTCACCAGGGTCACCCTGAAATAGGGATCGGGCCTCATTGCAAAATATCA
AAACGCTAGCCTGGTGGCCAAGTATGAAAAATGTATCTCTAATTTTACTA
GTATCTGGGAGGCATCTGTCTCGTCAATGGTACAGTTTTCTGTAAATAAA
CCCGATACCTATGGACATTTCAAAATTCATTGCCGTAGAGAACTTTGAGA
CAGTGTACTACGCTATGTTATGCGTGAGATACACTCTGATAAGATTGATA
GCAGCACAGTGGTGACATAATTTTGTACATGTTATCAAAGTTCTTCCTTA
AGATTTTCTACCACAAAAAATCTTTTATTGCTTCCATAGCTGATGGATGT
GAGGACAAAGCTGAATGGTGTCCTGGATACAAAGCTTATTGTAAAGATGT
GCCTTACATCCAAGAAAATTGCCCAAAGTCCTGTGAGAAATGCCGTAAGA
AATTTACTACACCTTTTGATAAAAACGCGATAAAATAAATACAGTCAAAT
GCTCTTATTCGAACCTCTACTATTCGAATCTTCCTATAATTCGAATCAAA
ATATTTGTCTCTTCAGAAATTACTATAAAATACTCTATTTAATTCGAATC
TTTCTCTAATTTGAGGAAAATTTATGGTCCCTTTGAAGATCGAATTAGAG
AGAATATCATCAATAAATTTCTTACAATCTACTTTTAATGTAGTACTGTC
TCGCAATCTGCATTAGAGGCCCGGGGGGTGTTACTTAGGCAAAACGGGTG
CTGGGTATGTGTGGACGGTAAGGGTCGGTTTTTTTACCCTTCAAAGTCTC
TGTAAGGGTCGCAAAAATTAGAAAAATTTAAATTTGTCTCTCTAAGGGTC
GAAAAATTCACGATTTTTAGTCTCTCTTATGGTAGGGAGTTTTTCAAAAA
TCAAAGAAATTTTTCAAAAAAGTCTCTATAAGGGTCGGTTTTTGGAAGTC
CCATCTGCACATACCCCTCATCCGCCAACCCGAGATTGGAGGAAAGGCCG
AATTTTTGAAAGACTTTAATTTAGATTACGCAATTGATAGTTGAAGATTC
AATCGATCGAACATGTCAATGAAATTTTATTAGGAGAATACAAGGTAATT
TATTATCATAAGTTATTATTACCTTCTTTTTTAGCACAAGTTGGGACTGG
TGAACCGACAAGTAAGTTTTTTAACCATTTATTCAATAGGCTGTTCCCAA
AAAGATTTGTACCCCCTATTTTGATGAGGTCCCATTTTACTGACCACCTT
TGATTTTTACACTTGAAAATTCAGACCCCCTGGATTTTTTATTTTTCAGA
CCATCCTCCACGACACACTTTCCTCAACATGGGGGGGGGGCTCAGACTAT
TTGCTTGGAACAAATTGCTTTAAAGCAAAGAATGAAGTTAGGGTGTAGTT
TGTAGGAGAAGATCAAATATTGATTGAACGAGCGGAGTGAAAAATTTAAG
AAATACCTGTCATATCAGATAGACCCACTTTTCTAATACCAGCACACATT
TTTCCTTGATATCGAGGTGTCAGTTTAAAATAAATTTTTAACGTTTTTAG
TCACTATTTTATTTTAGCTTGCAGAGACCGTTCCTCGAGATGTTCTTCAT
ACAGTCATATTTGCTACCAAGATAAATATCTAAACTTTATGAAAACTAAT
TGTGAGAATACATGCCGATTCTGTGAAGGTAATTCCAACAGAAGAAGAAA
TAGAAAATCTTTGCATAATTTTTTATATAGTGAGAAGGATAGAGAGTAAA
GTGAACTTTCTTACAATTGATATTTATGCGTATTCTTCGCATTTAACTTT
TACCCCGTCCCTTAATTACCATCGATAACACAGCCCCCGGTGGCAACTAC
CCTTGCCAACCGATGAGGGTGCTCCGCTGAGGTTCGAAAAATGGACCCTA
CTAGGGACTCTTTTTTTCAAAAAATTTGCCGAAATTTGCGAAAATAGTGA
ACCTGAATGGGACTAAAATTCCAAAATTTTCTCAAATTTTCTACTTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGGTTACGGGGATGCTC
CGCTGGTCAGGGTACCTTTTTTGACCTCCACGAGTCCCAGGTAGGGTCGC
AAAAACACCAAAATAGAAAAATCAGTCCTCCGTAGGGTGACTATTTTTGG
AAAATTTGGGGAAAAAGTAGAAAATTTGATAAAATTTTGGAATTTCAGTC
CCATTCAGGGTCACNTTCTTCGCATTTAACTTTTACCCCATCCCTTAATT
ACCATCGATAACACAGCCCCCGGGGGCAACTACCCTTGCCAACCGACGAG
GGTGCTCCGCTGAGGTTCGAAAAATGGACCCTACGAGGGACTCATTTTTT
CAAAAAATTTGCCGAAATTTGCGAAAATAGTGAACCTGAATGGGACTGAA
ATTCCAAAATTTTCTCAAATTTTCTACTTTTCTTCAAATTTTCCAAAAAA
AGCACCCTTGTGGAGTTTGAAAAAGGTACCCTGACCAGCGGCGCATCCCC
GTAACCCATTTTGCCCTAGTACCCCTCCCCCGGGACACAGCCATAGTAAG
CAACAGACTAAATTTGCCACACATTCGCCAGACTAGGCTCCAAACTTTGC
CAGAGCTTGATTGTCATTATATCCACCTAAAAGAAAAATACAAAGCCAAA
CCCTGCTCAACATTGTTCTCTAGGAGATTGCGGAATAGCAGAACAACGGA
AACTCGCATCTGCATCCAGTGTCGTACAAGGTGAAAGTGCACCGGTTGGA
TACTACCCTTGGCAAGCGGGTATCTACTTTGATGGTGATTTTCTATGTGG
AGGGACGCTTATCGATAGGACACACTTGTTGTCGGCTGCACATTGCTTTT
ATGTGTTAGATCGCGATGATTTAACGAAATACAAAGTAGTATTGGGTGAT
AACAACAAAGATGTTAATGAAGGTATTTTATAAGCCTGAACCCCAGACCC
ACTGGAAAATTTGGCAAAGATTTCATCTCAGGTGGGGAAAAACCCAGTGG
GTTCAGCCCCACTAGGAAATTGACTTTGATTGCATCCTCATTCAAAATTC
AATGCTTGAAAATTAAACTCCTAAACCATCCCCAGTTGATGTTTTAACCT
TGGAACAATAGAATTTCTATCCCCATCGGGATTTCAATAGGAATTTTTTA
TCCCCAATAAGGAAAAAGATTCATCCGGGGCTGTGAGATAGGGGTATTTT
TATTGAGAATGAATTCTGTAACCCCTTAATGACATTTTTGAGAGCATCGA
GAATCATTTATTTTCAAGGTATGGAACAAAGAATCACAATCTCGAATATG
ACGTTACACGAAAATTATGAAACGCAAACCTACAAAAACGATATTGCTAT
ACTTGAACTATCGATCCCAGCTGAGCTCAACAACTTCGTCAACACAATCT
GTTTACCTGATTACAGTGTAGAATTACCAGTTGGAAAGAAATGCTTCGTC
ACAGGTAATGGTTTGTGTTTTTTTTTCTCGATAAAACTGATGTCAATACA
CAAACAAACCAATCCTTTTTACCCTTTAACTCACTGACAGAAACTCTATC
GTAGGAATATGTATTTGAACGAAATTTTGGCCCCTTAGCTTAATTTATAG
TTGGAAAATCTCTTTGTTATTGAAAAAAATACTTGGTAACTTGAAGACTC
TCGCATAGACATGAGTCAAACCAATTCTCTTTCTATTCTAGGTTGGGGTA
AAACATCAGTCATTAGTTACACGTCCAACCTTTTACAAGCTGAGCTCCCA
GTGGTCGACACAGAAACATGTGCTACCCGAAATTCATTCAATAACCACGT
GGTCACTACCGACATGCTTTGCGCTGGATATAACAATGGTTTCACATACG
CATCAGCATGTCATGGTGATTCTGGTGGTCCTTTCCAATGCGAAGATCCT
GATTCTAAGAAATGGTTTTTATATGGTGTCGTGAGTTGGGGGTCACCCCA
GTGTAATGGACTTGATTCATATACTGTTTTTACAAAAGTTAGTAAATATA
TTTCATGGATTTATAAGAACAAGACTTAAGAAGAAATAACTAATGTAAAT
TACAGACCAGATCAGTTGTTATGCAATACCCCCATCATCTGTTTACAGGT
TATTGATCCGGCTTATACAAATAGGACTTCATTTATCTGTTTTCTATCAA
CAAACACTTTCACCGTGTTGACAAATCATTACAACTGTTTACATGACCTT
CTGAAATTTATCAAGTATTATTTGTGGTGAGAAATGTGGAAGGATGTCTG
TCATTATGTTCCTCGCCTCACTACATGTTTTTTTATAAAAACATCCAAAT
TTTTTGAAGCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017656XLOC_017656Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030757-exon-sc0000845-1575043694:46148..46253TCONS_00030757-exon-sc0000845-1575043694:46148..46253Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:44935..45033TCONS_00030757-exon-sc0000845-1575043694:44935..45033Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:44331..44441TCONS_00030757-exon-sc0000845-1575043694:44331..44441Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:42560..42664TCONS_00030757-exon-sc0000845-1575043694:42560..42664Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:41843..41869TCONS_00030757-exon-sc0000845-1575043694:41843..41869Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:41326..41436TCONS_00030757-exon-sc0000845-1575043694:41326..41436Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:39932..40180TCONS_00030757-exon-sc0000845-1575043694:39932..40180Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:39400..39585TCONS_00030757-exon-sc0000845-1575043694:39400..39585Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1575043694:38542..39162TCONS_00030757-exon-sc0000845-1575043694:38542..39162Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:46148..46253TCONS_00030757-exon-sc0000845-1510915933:46148..46253Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:44935..45033TCONS_00030757-exon-sc0000845-1510915933:44935..45033Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:44331..44441TCONS_00030757-exon-sc0000845-1510915933:44331..44441Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:42560..42664TCONS_00030757-exon-sc0000845-1510915933:42560..42664Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:41843..41869TCONS_00030757-exon-sc0000845-1510915933:41843..41869Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:41326..41436TCONS_00030757-exon-sc0000845-1510915933:41326..41436Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:39932..40180TCONS_00030757-exon-sc0000845-1510915933:39932..40180Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:39400..39585TCONS_00030757-exon-sc0000845-1510915933:39400..39585Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1510915933:38542..39162TCONS_00030757-exon-sc0000845-1510915933:38542..39162Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:46148..46253TCONS_00030757-exon-sc0000845-1491911889:46148..46253Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:44935..45033TCONS_00030757-exon-sc0000845-1491911889:44935..45033Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:44331..44441TCONS_00030757-exon-sc0000845-1491911889:44331..44441Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:42560..42664TCONS_00030757-exon-sc0000845-1491911889:42560..42664Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:41843..41869TCONS_00030757-exon-sc0000845-1491911889:41843..41869Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:41326..41436TCONS_00030757-exon-sc0000845-1491911889:41326..41436Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:39932..40180TCONS_00030757-exon-sc0000845-1491911889:39932..40180Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:39400..39585TCONS_00030757-exon-sc0000845-1491911889:39400..39585Clytia hemisphaericaexon
TCONS_00030757-exon-sc0000845-1491911889:38542..39162TCONS_00030757-exon-sc0000845-1491911889:38542..39162Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000845supercontigsc0000845:38542..46253 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.0143	15.3005	2.99705	10.2584	1.71577e-07	0.0021573	0	1.76099e-09	0	0.000385062	0	0	0	0	1.77162	0	3.27198e-05	0	0	0	0	8.02548e-05	5.76658	2.89402	0.000133372	3.3857e-05	0	0	1.10208	1.17156
Blast
[Close]
BLAST of TCONS_00030757 vs. Swiss-Prot (Human)
Match: PRSS8 (Prostasin OS=Homo sapiens GN=PRSS8 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.298e-44
Identity = 104/304 (34.21%), Postives = 145/304 (47.70%), Query Frame = 1 
Query:  508 YLNFMKTNCENTCRFCEGDCGIAEQRKLASASSVVQGESAPVGYYPWQAGIYFDGDFLCGGTLIDRTHLLSAAHCFYVLDRDDLTKYKVVLGDNNKDVNEGMEQRITISNMTLHENYETQTYKNDIAILELSIPAELNNFVNTICLPDYSVELPVGKKCFVTGWGKT--SVISYTSNLLQA-ELPVVDTETC-----ATRNSFNNHVVTTDMLCAGYNNGFTYASACHGDSGGPFQCEDPDSKKWFLYGVVSWGSPQCNGLDSYTVFTKVSKYISWIYKNKT*EEITNV----NYRPDQLLCNT 1383
            YL  +++         E  CG+A Q ++   SS V G+      +PWQ  I ++G  +CGG+L+    +LSAAHCF      +   Y+V LG +  D      +  T+ ++  H +Y  +  + DIA+L+LS P   + ++  ICLP  +   P G  C VTGWG    SV   T   LQ  E+P++  ETC             H V  DM+CAGY  G     AC GDSGGP  C  P    W+L G+VSWG   C   +   V+T  S Y SWI    T  +   V      +PD  LC +
Sbjct:   20 YLGLLRSG--TGAEGAEAPCGVAPQARITGGSSAVAGQ------WPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKE--AYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNCLYNIDAKPEEPHFVQEDMVCAGYVEGGK--DACQGDSGGPLSC--PVEGLWYLTGIVSWGD-ACGARNRPGVYTLASSYASWIQSKVTELQPRVVPQTQESQPDSNLCGS 308
The following BLAST results are available for this feature:
BLAST of TCONS_00030757 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRSS81.298e-4434.21Prostasin OS=Homo sapiens GN=PRSS8 PE=1 SV=1[more]
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