TCONS_00031944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00031944
Unique NameTCONS_00031944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3582

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00031944 ID=TCONS_00031944|Name=TCONS_00031944|organism=Clytia hemisphaerica|type=transcript|length=3582bp
ATAATTATTGACAATAACGTGTCTTTAAAAGGGCAGTGTGAAATAATTAT
ACGAAGGGTATAAAGTTTGAGTCATCTAAGAGTACAGATTCATTACTTTC
AACCAACGTAGTATTTGCACAACAAACAAGAGCTCTGGAACAAGCAGCAT
GGTGAAGCTGCAGTTACTAACGGCCGCTTTCATTTTGGTGCTGGCGGTTT
CCATCAGCAATGTGGAAATGCTTAGTAAAAAGAATTACCGAGTCAGCGGT
ATCATCGATTTTATGGCATTTCGCAACCCACGTTTTGGTCTCCTTGGAAT
CTTAgacataaaaaactttttcacgaACGGTGGCAAAGTTGGCGAGTTCC
TCCGAAAAGCTGACCAATTCTTGGCACCAGTAAAAGTTACCGGACAGATC
AGTATCGATTTACCGGACGGAAAGACAGGAATTATCGCAACATATGAAGG
GGAATATGTCCACTTTGGTCAGCCGTTATTATTTTCCTTTGATTATGAAG
GTGATGGCGCTAGTCTCATGCCCAAATTCCAAATCAACTGTACTCTTCAG
GTTAGCGACAGTCCAAGTAAATACGTTTGTGATGGAAGTGATAGTTACCA
AAGTCAATGGGCGCCCACACCTGCAAAAGCTTCCACAGAATCACGTGATT
CGCATTTATCAAACACCATTCGAAATCAACTCGCCCCAATAAAGGAAGAA
CTACAGAACCTCCAAAGCAAATCTACTAAGAATAACCAGGCTCGATCCGG
TACATTGGGTCTGTTAACCAAAGGTCTGCATATGTACGGGTACGAGAAAT
TATACAAATCGAAGGAGGGGTACCAAAACATAGAGCAGTCCCTTAACTCT
CTCATTCAACTTGCGAAAAGCATCGGTGCACAACTTGATGATAGTGGGAT
TATGGGTATTATATTCTATTTCCTTGGACATTTGGATGATATTGAGGATG
AGTTATTTGATATCACTGGAGCTTTCCTTGTCAATTTGAACACTCAAAAA
ATTAGTGAAGACGCTAAAGAACAGCCATACAAAATTGAAGGCAACTGGAA
AGTGACCCGGTCAGACATGGTCGGTAATGAAGATGTAGAAGGTTTTGGGC
AACTTTATGTTTTACCAGAATCTATTGTCGTTGGAGTCGCAGATATCGCT
GAGGCTTTAGGACATCCGATACCGGATTCATCGCCGCTTTCCGACCTTGA
GCTCCCATTCATCCGTGGACCAGCCTACCCGCTGTATCAGCTCCGTCGCT
GGATAGAGCGTGAGAACGGCTACAAATTTGACTGtcatttgaaatataaa
tacaATGCTATTATCGGCAGTGACACACCAGATCAATACGTTGTTTTCAT
GAACATGTGGGATTCTGATGGTGATGGATTTTTGGAATTTGACGATTGCC
TTGGAAAAGGAAATGCACTTGGTCTAGAAACAATTGACGTGTCTTCAGGT
TCCCACCGTTTCAGTCAATGCGACAAAGACTACAGTGTCTACACAACCTT
CAACAGAGCTAATTATCCACAGAAGGATGAAGGAACCGACATGATCTGGT
ACAAACTGTCAGGCTATTATACCATATGGGCTGATGATGGAAGCGGTACC
TTCTATGAGCCTTATGGATATCTTAAATTCAACGTCGGCAGTCGACCGAT
CAACCAAGGTTTTGTTGTTTGGGATGTACCACGTGATTATGACTCAGCCA
TCAGAAACGAACACAACCAAACTTTCCCTTTCGCAATCTATTTCCGTGAG
TCGAAAGATTTCATGCAGTCAACAGAGAAGATCACAGCTTTAGGGTACGC
CAAGGAGANGAAGCAAAAGATTTCATGCAATCAGCAGAGAAGATCACAGC
GTTGGGGTACGCCAAGGAGAATGATGGTATAGGGCACGATGATGGTATTG
GGAATTGGGATGGACATCAGTGGTCTGTCAATGCTTTGGAAGAAGGACAG
TACTATAGCAACGATTTCCCTTCGGACGgGCACTGGGCACAAATCAAATT
GAGTTTGACAGCGATTGGAGTAGTAGCTGAACCAACACCAGAGAAAGTCG
AATACGGGCTTGATGTCAAAATGACCTTTTGGTGCGATTCTGATAAGGGA
GGAAGTTACGAAGCTTATGGGGACCTCAGCGTCAATTTCGGTTCACTGGC
TGAAAATCAAAGAGTTCAATTATGGTATCGTAAAGAAGGCAACAATATTG
TTAGAGACGAAGGAGAATCATACACTGATTACATGTACTACACTTTCATG
GAATCACCAGATTTTATTGATGCAGAGCAAACAACGAGCAAAGTGACAAC
GTTGAATAAGATCTGGGAAGATGACAGCTCGGGCGATGATACCATTGGAG
ATTATAATGGATACCAGTTCAAACCGAGTGATCTCATCGGAAATACAGAT
TACACGGAGTTCAGATATGATAAACATAATTGGGTTCGGCTAACACTGAC
CATCACACCACTCACATCATCCGACAGTGTTTTAAATGAATACGGCTTAG
AAGGCACTCTTTACATGATTGAGAATGAAGACTCGGGAACAAATTATGAA
GCTTATGGATATGTGAATGTAGACATCGGCAACAAATTGTCCAATAAAAA
CCGAGAGATGTGGCGAAGACAACCTAGCAATCATTTATCAATCAAGAAAG
GAAAAGGACACACAATTAAATTGAATGACATCAAATTCTATGAAAGATCA
GTATTCATTAaagaaacaagcaaacaaactttACTCGTCCACGGTTACGT
AAAGGAGGATGACAATAATGGAGAAGATAAATACATCGGAAATTATGAAG
GTCTCTCCTTACCCGCCCACGAACTAGCCCGCCCACAAGGAATCACCCGC
ACTTTCGCATCAGACGGTGGATCAGGGGGTCgtgttgttttgaaattgaa
acttcGCAACTACACCAAAGAGAGAGCAGCAGAGGAAGCGAAAGATCGAG
AAATGTTGGCCAAGAAAGAAGcggagaaaaagaagaagaaaggaAATGAT
ACTCCAGTTCAAAAAGAGAAGAAGGaactgtaaattttcaaatacatGAT
CAATGATCAATGATCGAACATTTATAAAAGGGAACAATCTTTGGACctgc
aaagaaaaatagatcTCCTTCATGGCAATTGTAAccatagtcgaacgtgc
gcaacgcgcTAGGCTAAACTTCAGTATTTTTTCAACTGACTCAAAGGCCC
GATTGTAGATGCTCAAATCATAGGGTGGACGAACTTTgcacaaaaccttt
aaaaataacTGACTGAacggttttagcctcgttttggcgaaaaactcgtc
aaAAAGCACTCCCAGATATTCGCCCAAGGAACAAGtctgcaaaattttag
ccaaatccgaccatttttgaagtctccaggctgccccaaagtatttggga
cacacacacacagacattctctGATTCTAGTTGAGAATTGTAGataattt
tctcaattttttttactaaataattGAATTACGTTGAACTTTCGAAATAG
TTTTGAATATTAAGATCTATCatgtatcaaaatttgaatatttttttctc
gtaatTATTGTAATACTCGGTTAATGCCGACC
Run BLAST on NCBI

protein sequence of TCONS_00031944-protein

>TCONS_00031944-protein ID=TCONS_00031944-protein|Name=TCONS_00031944-protein|organism=Clytia hemisphaerica|type=polypeptide|length=577bp
MVKLQLLTAAFILVLAVSISNVEMLSKKNYRVSGIIDFMAFRNPRFGLLG
ILDIKNFFTNGGKVGEFLRKADQFLAPVKVTGQISIDLPDGKTGIIATYE
GEYVHFGQPLLFSFDYEGDGASLMPKFQINCTLQVSDSPSKYVCDGSDSY
QSQWAPTPAKASTESRDSHLSNTIRNQLAPIKEELQNLQSKSTKNNQARS
GTLGLLTKGLHMYGYEKLYKSKEGYQNIEQSLNSLIQLAKSIGAQLDDSG
IMGIIFYFLGHLDDIEDELFDITGAFLVNLNTQKISEDAKEQPYKIEGNW
KVTRSDMVGNEDVEGFGQLYVLPESIVVGVADIAEALGHPIPDSSPLSDL
ELPFIRGPAYPLYQLRRWIERENGYKFDCHLKYKYNAIIGSDTPDQYVVF
MNMWDSDGDGFLEFDDCLGKGNALGLETIDVSSGSHRFSQCDKDYSVYTT
FNRANYPQKDEGTDMIWYKLSGYYTIWADDGSGTFYEPYGYLKFNVGSRP
INQGFVVWDVPRDYDSAIRNEHNQTFPFAIYFRESKDFMQSTEKITALGY
AKEXKQKISCNQQRRSQRWGTPRRMMV
Run BLAST on NCBI

transcript from alignment at sc0000936:42679..50682-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00031944 ID=TCONS_00031944|Name=TCONS_00031944|organism=Clytia hemisphaerica|type=transcript|length=8004bp|location=Sequence derived from alignment at sc0000936:42679..50682- (Clytia hemisphaerica)
ATAATTATTGACAATAACGTGTCTTTAAAAGGGCAGTGTGAAATAATTAT
ACGAAGGGTATAAAGTTTGAGTCATCTAAGAGTACAGATTCATTACTTTC
AACCAACGTAGTATTTGCACAACAAACAAGAGCTCTGGAACAAGCAGCAT
GGTGAAGCTGCAGTTACTAACGGCCGGTGAGACAATTTTTAATATGAAAA
TAAAATTTTGGTTGACAGATCGTTGAGTTTATGGGGCCTTTTTACAGTTG
GGAAACTTTAAAATGTCAACAAAACTATCGGGATGAGAGTAGAGAGGAAC
TTTTATTGAGGTAGACTACACTTCATCGATACGCTATTTGATCACTTTAA
TAGTCTTCTACCTTTCACGTGTTTTGCTTTGCTCTGAAACGACGTCAGTA
GTTTCACAACAGTCCTGCAACGACTCATGTGGCACCAAGTCGCAATGGTG
ACGTAATCAGTCCTGGTTACCCATGATTAATTTCCATCGTGAAATGGTCT
ATGTTTTCTGGGTGAAATCTTTGTAAAATTACTGTGAAATTCATGCCCGT
CTAGTACATTGATGGAGTATTTTTTTTCGTTTTCAGCTTTCATTTTGGTG
CTGGCGGTTTCCATCAGCAATGTGGAAAGTAAGTTTCTGTCTTGTTTCTT
GCTCAAACTTCGACTTAATGAAAAGCGTTTCGAATATTTTTCAACTCTTT
TAATCACTTTATGAGCTGGCTTTCTGCTATCTGGCTGGTCTGCCAAAACA
TGTACACAGTTCAAAACGCATCTCTCTAACCAACACATCGTGAACACATC
ATGAACACATTACACGAAAAGATAAATATATGCAGTAGACTCTCTCTAAT
TCGAACTAAAATATTGGATCCTAAGCTAGCGAGTTGTGTAAAATATTGGA
CCCTAAGCTAGCGAGTTGTGTAAAATATTGGATCCTAAGCTAGCGAGTTG
TGTAAAATATTGGATTCTAAGCTAGCGAGTTGTGTAAAACACTTCCTATA
ATTCGAAGCTTTCTTTAATTCGAAAAAATATTTTTGTCCCTTGAAGATCG
TTTAAGAGAAAGAGGCACTGTAGGTCTTAAAAGGATTCTGTCGTCTGAAT
AAAACTGTTTCTTTCTCTTAATAGTGCTTAGTAAAAAGAATTACCGAGTC
AGCGGTATCATCGATTTTATGGCATTTCGCAACCCACGTTTTGGTCTCCT
TGGAATCTTAGACATAAAAAACTTTTTCACGAACGGTGGCAAAGTTGGCG
AGTTCCTCCGAAAAGCTGACCAATTCTTGGCACCAGTAAAAGTTACCGGA
CAGATCAGTATCGATTTACCGGACGGAAAGACAGGAATTATCGCAACATA
TGAAGGGGAATATGTCCACTTTGGTCAGCCGTTATTATTTTCCTTTGATT
ATGAAGGTGATGGCGCTAGTCTCATGCCCAAATTCCAAATCAACTGTACT
CTTCAGGTGAATTATTTTTATGACTGTCTAGTCGTACGAACACTTTTTCT
ATCATTACGAGCTCATTTTTTGTGTGTGAAAGATATCAGAAATTAGAGTA
TTTCTTAGTCTCTATTGGCAATACAAGCATAGCACCCAGAAGAATTTCCA
GGTTTTGAAATTTCAAAGCAATCAACTCCAAAGTTACTGCATACGCGTAT
TGTAGGCTAATGAGAATTCAACCCATACATATGAAAACTGTGTAATCTGT
TTAGGTTAGCGACAGTCCAAGTAAATACGTTTGTGATGGAAGTGATAGTT
ACCAAAGTCAATGGGCGCCCACACCTGCAAAAGCTTCCACAGAATCACGT
GATTCGCATTTATCAAACACCATTCGAAATCAACTCGCCCCAATAAAGGT
AAGAAACATCAAGCATTCTAATAAATCAGAGTCTCCACAACTCGAAACCT
CCTTAACTCGAATGTATCCTTAACCCGAACAAGGCTCCGGGTTCCTCAAG
GCAAGAAAGCCTCAAAGACAAGTCTCCATAGCTCTAACAAATATGAGTTT
CCCGCGAGTGTTCCAGTTATAGAGATTCCACTTTATAATCTTTTTCAGTG
TGAAGAAACAAGAAACGGGAACAGCTTTAAATAATTTATGTTATTTTCAA
CCTTTGTAGGAAGAACTACAGAACCTCCAAAGCAAATCTACTAAGAATAA
CCAGGCTCGATCCGGTACATTGGGTCTGTTAACCAAAGGTCTGCATATGT
ACGGGTACGAGAAATTATACAAATCGAAGGAGGGGTACCAAAACATAGAG
CAGTCCCTTAACTCTCTCATTCAACTTGCGAAAAGCATCGGTGCACAACT
TGATGATAGTGGGATTATGGGTATTATATTCTATTTCCTTGGACATTTGG
ATGATATTGAGGATGAGTTATTTGATATCACTGGAGCTTTCCTTGTCAAT
TTGAACACTCAAAAAATTAGTGAAGACGCTAAAGAACAGCCATACAAAAT
TGAAGGCAACTGGAAAGTGACCCGGTCAGACATGGTCGGTAATGAAGATG
TAGAAGGTTTTGGGCAACTTTATGTTTTACCAGAATCTATTGTCGTTGGA
GTCGCAGATATCGCTGAGGCTTTAGGACATCCGATACCGGATTCATCGCC
GCTTTCCGACCTTGAGCTCCCATTCATCCGTGGACCAGCCTACCCGCTGT
ATCAGCTCCGTCGCTGGATAGAGCGTGAGAACGGCTACAAATTTGACTGT
CATTTGAAATATAAATACAATGCTATTATCGGCAGTGACACACCAGATCA
ATACGTTGTTTTCATGAACATGTGGGATTCTGATGGTGATGGATTTTTGG
AATTTGACGATTGCCTTGGAAAAGGAAATGCACTTGGTCTAGAAACAATT
GACGTGTCTTCAGGTAAAAGCTTAGCTTTATTAAACTCATCTATGACAAA
AGAAATTCTGCCAACACACTATAAACAACGATTGAAAATTAGTAACTACA
GTGGAGTCTCCATAACTCGAACACGCACGGGGGACCAGAAAACTTGTTCG
AGTTGAGGAGTTATTTGAGTTATAGAAGTTCGAGTTATGACTCCACTGTA
CATTCATCCACACTGAAAAAAAACACTTACATAGGACTGATATTGGATAT
TGTATTAATCATAAATTTTGACTTCTATTCAGGTTCCCACCGTTTCAGTC
AATGCGACAAAGACTACAGTGTCTACACAACCTTCAACAGAGCTAATTAT
CCACAGAAGGATGAAGGAACCGACATGATCTGGTACAAACTGTCAGGCTA
TTATACCATATGGGCTGATGATGGTACGTCTCTATATACTTTCTAGTAAA
AAATATATTTTCTTTACAAGCCTTCCAGAATATATAATGGGAGACAAGAA
CAAGGAGAAAAGTTATGACTATTAACGATACTATATAGTATAAGAAACCT
TTTTCGCTAGAGGATGAGCAGAAGCCTAGGTATGTTGAAGTTTCATTTCT
CAAGTTTTATTTGCTCTCATTTTCTCTCTCTAGGAAGCGGTACCTTCTAT
GAGCCTTATGGATATCTTAAATTCAACGTCGGCAGTCGACCGATCAACCA
AGGTTTTGTTGTTTGGGATGTACCACGTGATTATGACTCAGCCATCAGAA
ACGAACACAACCAAACTTTCCCTTTCGCAATCTATTTCCGTGAGTCGAAA
GATTTCATGCAGTCAACAGAGAAGATCACAGCTTTAGGGTACGCCAAGGA
GANGAAGCAAAAGATTTCATGCAATCAGCAGAGAAGATCACAGCGTTGGG
GTACGCCAAGGAGAATGATGGTATAGGGCACGATGATGGTATTGGGAATT
GGGATGGACATCAGTGGTCTGTCAATGCTTTGGAAGAAGGACAGTACTAT
AGCAACGATTTCCCTTCGGACGGTACGTGTTTTCATCTTTCAATTACCGT
ATTACTTCAAATAAACGCCCCCTTCTTTTAAACACCCCCTCGAATAAAAG
CCCCTCCTAAAAAGAAATTTATTTAACAAACGCCCCCTCAAATGAACGCC
CCCTCTACTGGAGGGGCGTTTATTAGAAACTTGCGACTTAAATACTTTGA
TACAAGTTTTGATTAGGATTGAAAAGGAAGATTTTAGTCTTTTTTGTAAC
CAGATCAGTTTTGATGCAATTTTAATCGCCGACCCAAAGAAATTTGCACT
GAAATCCTGGTATAAAACTAAAACAAAGAGTAGATTTGCTCTAAATATTC
GACGTTAGACTCAAATAATTTAATAAACGCCCCCTTCTTTTAAATTCCCC
CTCAAATAAACGCCCCTCCTAAAACGAAAAAATTAAATAAACGCCCCGGG
CGTTTATTCGAAGTAATACGGTACACTCTGAAGTTAGTCCCAATTTTAAT
AAACTTGACGACTTTTAAATGAAAACCTTTTCTTTTTCACCATCAAAAAC
AATGAAAACGAAGTGTTTGTCAAAACCATTATCCATATAAAACTGGAAAG
ACTTTTCATGATATGCACGGCACCATTGCAATATCTTCCACGGACCCAAC
ATCTGATTGGTTGAAAGTGACGTATTGACTGTTTTTACAACCAATCAGCT
ATTGGGTCCGTAATGTAATGTCAGAGGACTTTACAATGGTATCATGAATA
CATGAATACATGGGTTCTTCTAACTAGAGTACATCATCATTAGAGAATCT
TCAATGTCAAACTCAGCTAAAGTATCCTCCAAGATTTTACAGTTTTCTTA
ATGACATTAATTACTTAATAGTACTTAGTTTATTTTATTTTTCTTCAGGG
CACTGGGCACAAATCAAATTGAGTTTGACAGCGATTGGAGTAGTAGCTGA
ACCAACACCAGAGAAAGTCGAATACGGGCTTGATGTCAAAATGACCTTTT
GGTGCGATTCTGATAAGGGAGGAAGTTACGAAGCTTATGGGGACCTCAGC
GTCAATTTCGGTAAGTATTGTACCCATATAAAAGCGTGTTATGCTTGGCG
GTCGCCTTAATTTTCAGCTCACGAATAATGGGCAAAGTTATTACTTATAT
CCCTAATCTTTCCGTTTATTAAGCGTTATGTGTCACCCCCTCAAATGAAC
GCCCCTTCTTAAAGGAACAATTATCAATAAATTCCCAACTAAAAATAAAC
ACCTCCCCTCTAGGACAGCTAGCAAAAAGCTGTAAGGTAGAATTGTAAAT
AGAGAAAAACTTTGTTAATAATAGTAGTTTTTCAGTCTCGAACTAATCTT
GACCTATTTTTACATATCTAAAATGATTAACATTTTATTATCATTAACTT
GTTAAAGTGACCTTGGCTAAAGATTATTAAATAAACACCCCCTTTCGAAT
TGACGCTGCTCCTAAAATCCAAAAAAAATAATAAACGTCTGAGGCGTTTA
TTTGAAGTAATACGGTATTTGCAAATATTAGTAAATTCTACTGGATTCAT
TTTCTATGGGAATGTAAAAAGAATCTCTCAAACTAAAAAAACTTTTTTTA
TTACTGCATTTTCATATTTATCAGGTTCACTGGCTGAAAATCAAAGAGTT
CAATTATGGTATCGTAAAGAAGGCAACAATATTGTTAGAGACGAAGGAGA
ATCATACACTGATTACATGTACTACACTTTCATGGTAAGGACATTCATAC
TCTTCTGTACTTGTAGGGTCACTTTGTAATTTTACCAAAAAACACAACAC
AATAGCATTTTATAATGACCCCCCCCCATTATATTAAATTTTCCTAAAGA
AGTGCTAAAACCTTCATTTTCCTAGGAGTTTTTGGGAAAATCCTAAAAAC
CACTTAATATTGACCCCCACCCTGCTTATTCCAGCCCCTCTACAATAAAG
AACAGAAGAGTATGGACAACATAACTTAAATAAATAGGGGCCTGAGTACC
TACCAGGGGAATTGGTACCTAACTGATGAGTACACCGCCTAAGGTTTAGA
GAAAATCAGAGAAAAAGGGGACACTTCTAAAGACATCTCCAAACATTATT
GAAAATTGACAGAGTGGGTGCAGGCACCTAGTAGAATATAAAAGTTTGTT
GAACATTGAATGCAAAAAAAATGTTTACCACTTCTTGTCGTTTTAGGAAT
CACCAGATTTTATTGATGCAGAGCAAACAACGAGCAAAGTGACAACGTTG
AATAAGATCTGGGAAGATGACAGCTCGGGCGATGATACCATTGGAGATTA
TAATGGATACCAGTTCAAACCGAGTGATCTCATCGGAAATACAGATTACA
CGGAGTTCAGATATGATAAACATAATTGGGTTCGGCTAACACTGACCATC
ACACCACTCACATCATCCGACAGTGTTTTAAATGAATACGGCTTAGAAGG
TATGCTGATCAATTTCCCATTCATAATAAAGAAGCGTCTGCCCTTCAAAG
AAAGTATACGAGAGAGGATTTTTATAACAAGAAAGGAAAACCTTGTTTTA
TATTGGAGTAGTGTTTTAAATTCGTTTTCACTTTATGTCGACGCATTAAT
TGATCCCAAAAATGCAAGAATCAAACGGTGCTAAGTCAAGATCTTTCTAT
AATTCGAACTAATTCTCAGTCCCCGTCAAGAAGAAACCTTCCTAAAACTC
TTTATATAATTCGAATCTCTCTGTAGTTCGAACAAATTATACTTCCAGGT
CCAGTTCGAATTAGCGAAAGTCAACTGTAGATGCTTATCTGGAACTTGGA
ATAATTTATCTCGCAATTTTGTTGCTATTTATCTTGATTCCACATTCCAG
GCACTCTTTACATGATTGAGAATGAAGACTCGGGAACAAATTATGAAGCT
TATGGATATGTGAATGTAGACATCGGCAACAAATTGTCCAATAAAAACCG
AGAGATGTGGCGAAGACAACCTAGCAATCATTTATCAATCAAGAAAGGAA
AAGGACACACAATTAAATTGAATGACATCAAATTCTATGAAAGATCAGTA
TTCATTAAAGAAACAAGCAAACAAACTTTGTAAGTATAAAAAAAACTTCA
AACCTTCTCAATGGCAATAAATATCCAATTAAATTTCAAGTCTACCTTGG
TTAGATTAAATATTTTGAAGACTCTTTAAAGATTAGGAATTTTCTTCCAA
TGGTGTTACAACAAATGAAATTCTAAAATAAAGCACTCTAATGAATCTAG
GTAGGTATTATTGGGTATCATAAGTTAACATTGCATTTTTATAAATTCTC
TCAGACTCGTCCACGGTTACGTAAAGGAGGATGACAATAATGGAGAAGAT
AAATACATCGGAAATTATGAAGGTCTCTCCTTACCCGCCCACGAACTAGC
CCGCCCACAAGGAATCACCCGCACTTTCGCATCAGACGGTGGATCAGGGG
GTCGTGTTGTTTTGAAATTGAAACTTCGCAACTACACCAAAGAGAGAGCA
GCAGAGGAAGCGAAAGATCGAGAAATGTTGGCCAAGAAAGAAGCGGAGAA
AAAGAAGAAGAAAGGAAATGATACTCCAGTTCAAAAAGAGAAGAAGGAAC
TGTAAATTTTCAAATACATGATCAATGATCAATGATCGAACATTTATAAA
AGGGAACAATCTTTGGACCTGCAAAGAAAAATAGATCTCCTTCATGGCAA
TTGTAACCATAGTCGAACGTGCGCAACGCGCTAGGCTAAACTTCAGTATT
TTTTCAACTGACTCAAAGGCCCGATTGTAGATGCTCAAATCATAGGGTGG
ACGAACTTTGCACAAAACCTTTAAAAATAACTGACTGAACGGTTTTAGCC
TCGTTTTGGCGAAAAACTCGTCAAAAAGCACTCCCAGATATTCGCCCAAG
GAACAAGTCTGCAAAATTTTAGCCAAATCCGACCATTTTTGAAGTCTCCA
GGCTGCCCCAAAGTATTTGGGACACACACACACAGACATTCTCTGATTCT
AGTTGAGAATTGTAGATAATTTTCTCAATTTTTTTTACTAAATAATTGAA
TTACGTTGAACTTTCGAAATAGTTTTGAATATTAAGATCTATCATGTATC
AAAATTTGAATATTTTTTTCTCGTAATTATTGTAATACTCGGTTAATGCC
GACC

Coding sequence (CDS) from alignment at sc0000936:42679..50682-

>TCONS_00031944 ID=TCONS_00031944|Name=TCONS_00031944|organism=Clytia hemisphaerica|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000936:42679..50682- (Clytia hemisphaerica)
ATGGTGAAGCTGCAGTTACTAACGGCCGCTTTCATTTTGGTGCTGGCGGT
TTCCATCAGCAATGTGGAAATGCTTAGTAAAAAGAATTACCGAGTCAGCG
GTATCATCGATTTTATGGCATTTCGCAACCCACGTTTTGGTCTCCTTGGA
ATCTTAGACATAAAAAACTTTTTCACGAACGGTGGCAAAGTTGGCGAGTT
CCTCCGAAAAGCTGACCAATTCTTGGCACCAGTAAAAGTTACCGGACAGA
TCAGTATCGATTTACCGGACGGAAAGACAGGAATTATCGCAACATATGAA
GGGGAATATGTCCACTTTGGTCAGCCGTTATTATTTTCCTTTGATTATGA
AGGTGATGGCGCTAGTCTCATGCCCAAATTCCAAATCAACTGTACTCTTC
AGGTTAGCGACAGTCCAAGTAAATACGTTTGTGATGGAAGTGATAGTTAC
CAAAGTCAATGGGCGCCCACACCTGCAAAAGCTTCCACAGAATCACGTGA
TTCGCATTTATCAAACACCATTCGAAATCAACTCGCCCCAATAAAGGAAG
AACTACAGAACCTCCAAAGCAAATCTACTAAGAATAACCAGGCTCGATCC
GGTACATTGGGTCTGTTAACCAAAGGTCTGCATATGTACGGGTACGAGAA
ATTATACAAATCGAAGGAGGGGTACCAAAACATAGAGCAGTCCCTTAACT
CTCTCATTCAACTTGCGAAAAGCATCGGTGCACAACTTGATGATAGTGGG
ATTATGGGTATTATATTCTATTTCCTTGGACATTTGGATGATATTGAGGA
TGAGTTATTTGATATCACTGGAGCTTTCCTTGTCAATTTGAACACTCAAA
AAATTAGTGAAGACGCTAAAGAACAGCCATACAAAATTGAAGGCAACTGG
AAAGTGACCCGGTCAGACATGGTCGGTAATGAAGATGTAGAAGGTTTTGG
GCAACTTTATGTTTTACCAGAATCTATTGTCGTTGGAGTCGCAGATATCG
CTGAGGCTTTAGGACATCCGATACCGGATTCATCGCCGCTTTCCGACCTT
GAGCTCCCATTCATCCGTGGACCAGCCTACCCGCTGTATCAGCTCCGTCG
CTGGATAGAGCGTGAGAACGGCTACAAATTTGACTGTCATTTGAAATATA
AATACAATGCTATTATCGGCAGTGACACACCAGATCAATACGTTGTTTTC
ATGAACATGTGGGATTCTGATGGTGATGGATTTTTGGAATTTGACGATTG
CCTTGGAAAAGGAAATGCACTTGGTCTAGAAACAATTGACGTGTCTTCAG
GTTCCCACCGTTTCAGTCAATGCGACAAAGACTACAGTGTCTACACAACC
TTCAACAGAGCTAATTATCCACAGAAGGATGAAGGAACCGACATGATCTG
GTACAAACTGTCAGGCTATTATACCATATGGGCTGATGATGGAAGCGGTA
CCTTCTATGAGCCTTATGGATATCTTAAATTCAACGTCGGCAGTCGACCG
ATCAACCAAGGTTTTGTTGTTTGGGATGTACCACGTGATTATGACTCAGC
CATCAGAAACGAACACAACCAAACTTTCCCTTTCGCAATCTATTTCCGTG
AGTCGAAAGATTTCATGCAGTCAACAGAGAAGATCACAGCTTTAGGGTAC
GCCAAGGAGANGAAGCAAAAGATTTCATGCAATCAGCAGAGAAGATCACA
GCGTTGGGGTACGCCAAGGAGAATGATGGTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_018415XLOC_018415Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00031944-proteinTCONS_00031944-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00031944-exon-sc0000936-1575043694:50507..50682TCONS_00031944-exon-sc0000936-1575043694:50507..50682Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:50055..50096TCONS_00031944-exon-sc0000936-1575043694:50055..50096Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:49227..49558TCONS_00031944-exon-sc0000936-1575043694:49227..49558Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:48835..48978TCONS_00031944-exon-sc0000936-1575043694:48835..48978Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:47820..48573TCONS_00031944-exon-sc0000936-1575043694:47820..48573Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:47410..47550TCONS_00031944-exon-sc0000936-1575043694:47410..47550Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:46811..47199TCONS_00031944-exon-sc0000936-1575043694:46811..47199Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:45773..45934TCONS_00031944-exon-sc0000936-1575043694:45773..45934Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:45099..45208TCONS_00031944-exon-sc0000936-1575043694:45099..45208Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:44384..44636TCONS_00031944-exon-sc0000936-1575043694:44384..44636Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:43754..43982TCONS_00031944-exon-sc0000936-1575043694:43754..43982Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1575043694:42679..43528TCONS_00031944-exon-sc0000936-1575043694:42679..43528Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:50507..50682TCONS_00031944-exon-sc0000936-1510915933:50507..50682Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:50055..50096TCONS_00031944-exon-sc0000936-1510915933:50055..50096Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:49227..49558TCONS_00031944-exon-sc0000936-1510915933:49227..49558Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:48835..48978TCONS_00031944-exon-sc0000936-1510915933:48835..48978Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:47820..48573TCONS_00031944-exon-sc0000936-1510915933:47820..48573Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:47410..47550TCONS_00031944-exon-sc0000936-1510915933:47410..47550Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:46811..47199TCONS_00031944-exon-sc0000936-1510915933:46811..47199Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:45773..45934TCONS_00031944-exon-sc0000936-1510915933:45773..45934Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:45099..45208TCONS_00031944-exon-sc0000936-1510915933:45099..45208Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:44384..44636TCONS_00031944-exon-sc0000936-1510915933:44384..44636Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:43754..43982TCONS_00031944-exon-sc0000936-1510915933:43754..43982Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1510915933:42679..43528TCONS_00031944-exon-sc0000936-1510915933:42679..43528Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:50507..50682TCONS_00031944-exon-sc0000936-1491911889:50507..50682Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:50055..50096TCONS_00031944-exon-sc0000936-1491911889:50055..50096Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:49227..49558TCONS_00031944-exon-sc0000936-1491911889:49227..49558Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:48835..48978TCONS_00031944-exon-sc0000936-1491911889:48835..48978Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:47820..48573TCONS_00031944-exon-sc0000936-1491911889:47820..48573Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:47410..47550TCONS_00031944-exon-sc0000936-1491911889:47410..47550Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:46811..47199TCONS_00031944-exon-sc0000936-1491911889:46811..47199Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:45773..45934TCONS_00031944-exon-sc0000936-1491911889:45773..45934Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:45099..45208TCONS_00031944-exon-sc0000936-1491911889:45099..45208Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:44384..44636TCONS_00031944-exon-sc0000936-1491911889:44384..44636Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:43754..43982TCONS_00031944-exon-sc0000936-1491911889:43754..43982Clytia hemisphaericaexon
TCONS_00031944-exon-sc0000936-1491911889:42679..43528TCONS_00031944-exon-sc0000936-1491911889:42679..43528Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000936supercontigsc0000936:42679..50682 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0105182	0.0208556	0.0480505	0.0236978	0.271826	0.326887	0.164061	0.191859	0.133495	0.132079	0.0535913	0.063203	0.652687	1.07915	32.7508	21.9348	3.42764	9.38604	0.550373	0.966533	0.0511737	0.0600064	0.192959	0.274105	0.344766	0.440744	0	0.0156957	0.0117	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00031944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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