|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042034 ID=TCONS_00042034|Name=TCONS_00042034|organism=Clytia hemisphaerica|type=transcript|length=906bp
ATTAAACGTAACCTGAGATTTCACTGAAACCCTTTTAGTTTTTTCTCTAG
CTGTTTCTCTGACTTTATAAGttattggtttgaaattttagttgACCCTT
TTTCATGATATATAGAGCCTAGAGATGTGAGGGAGTGTATGTagtatttt
gaaagtttgtccCGTACGTAACAACAAAGAACTTATGATTATCAGCAATA
GTAACATATTCATTTGAGGCTAGATTGCTAGCATAAACAATCTATgataa
atgtttgttttttaaagtaGAATAAAACAAGATAATAATGAAACCAGTCA
ATCAACGAGTAAGAGAGCATTGACAGCGTATGGAAGATTCATTGGGAAGT
GAAGTATTTAAAGAGATGAAAAGAGGAAGGATAGAGAAGATCAGggaaaa
gcagaaaaaacaacgACTTAAAAATGATGAGGCAAAAGAGGAGTATTGCA
AGAAGGAAAGAGCGAGTAAGAGATTACAACAGGCCAGAAAAAGATAAAGT
GAGGGACAAGCATCTGAGTTATCAATTTTACAAAGAAATAAACTAATTGG
TAAGAAAAAGAGAAAGCGAAATTCTGAAAACATGAGAAAAGAACGGgaca
ctttaaaaattaaagttaaGCTTACATACAACAAGAACAGAAGGCTTAAA
AGACAGTAGGCAAGCAATGAGAATGAAACCAGTCAGTCTGCAACCCCAGA
ATCTGTAAACCTTGATACATTAGTCATGAACAGTGTATCACCTCATGGAA
AAAGACGCGCCCTGCAAAGATTAGCCTTGAGCAATCCTCCATTAGAAGTC
AGTCCGCTTTACGTCTCGATAAGGTGGAAAGTAGGTTCAAAGCCAAAGAA
GATGCCCGATCTTTTCTTCACAAGAAGGTCATAAATTTCATGAATCAGGA
CATTAA Run BLAST on NCBI transcript from alignment at sc0003160:10007..10912 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042034 ID=TCONS_00042034|Name=TCONS_00042034|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at sc0003160:10007..10912 (Clytia hemisphaerica)
TTAATGTCCTGATTCATGAAATTTATGACCTTCTTGTGAAGAAAAGATCG
GGCATCTTCTTTGGCTTTGAACCTACTTTCCACCTTATCGAGACGTAAAG
CGGACTGACTTCTAATGGAGGATTGCTCAAGGCTAATCTTTGCAGGGCGC
GTCTTTTTCCATGAGGTGATACACTGTTCATGACTAATGTATCAAGGTTT
ACAGATTCTGGGGTTGCAGACTGACTGGTTTCATTCTCATTGCTTGCCTA
CTGTCTTTTAAGCCTTCTGTTCTTGTTGTATGTAAGCttaactttaattt
ttaaagtgtcCCGTTCTTTTCTCATGTTTTCAGAATTTCGCTTTCTCTTT
TTCTTACCAATTAGTTTATTTCTTTGTAAAATTGATAACTCAGATGCTTG
TCCCTCACTTTATCTTTTTCTGGCCTGTTGTAATCTCTTACTCGCTCTTT
CCTTCTTGCAATACTCCTCTTTTGCCTCATCATTTTTAAGTcgttgtttt
ttctgcttttccCTGATCTTCTCTATCCTTCCTCTTTTCATCTCTTTAAA
TACTTCACTTCCCAATGAATCTTCCATACGCTGTCAATGCTCTCTTACTC
GTTGATTGACTGGTTTCATTATTATCTTGTTTTATTCtactttaaaaaac
aaacatttatcATAGATTGTTTATGCTAGCAATCTAGCCTCAAATGAATA
TGTTACTATTGCTGATAATCATAAGTTCTTTGTTGTTACGTACGggacaa
actttcaaaatactACATACACTCCCTCACATCTCTAGGCTCTATATATC
ATGAAAAAGGGTcaactaaaatttcaaaccaataaCTTATAAAGTCAGAG
AAACAGCTAGAGAAAAAACTAAAAGGGTTTCAGTGAAATCTCAGGTTACG
TTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042034-exon-sc0003160-1491911889:10007..10912 | TCONS_00042034-exon-sc0003160-1491911889:10007..10912 | Clytia hemisphaerica | exon |
| TCONS_00042034-exon-sc0003160-1510915933:10007..10912 | TCONS_00042034-exon-sc0003160-1510915933:10007..10912 | Clytia hemisphaerica | exon |
| TCONS_00042034-exon-sc0003160-1575043694:10007..10912 | TCONS_00042034-exon-sc0003160-1575043694:10007..10912 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003160 | supercontig | sc0003160:10007..10912 . |
Blast
The following BLAST results are available for this feature:
|
