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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042283 ID=TCONS_00042283|Name=TCONS_00042283|organism=Clytia hemisphaerica|type=transcript|length=972bp
CCCGTTACTTTAATTAGACACAGAAGAGGGACTTTCAAGGGAATGagatt
tttatcgaataataTCAAACAATAGAGCGTCGAATACGAGAGCTTATGAT
TATCGAATACTAGAGAGAATACGTTGAATTAGAGATCACCCACTTTAGAA
GTAAATATTAGTCTGTTATAATCCCTAATTTGTTCCTAAAGTATATTTCA
TATTAGCTGTCAGTAAATTTTGAAAtgctcataacttttgatatactTCG
AGCTAGATAGCGATTTTACGcgcattgaaaagataatcgtGAGTGGGATA
Ttatcaacaaaataaatttcgaaaaatttgtgaaaatgaagatgaaaaat
ggaaaagaaaaaatatcaactgcTGGTAGAATTGTGATATAATCACCATT
TTTACAAAGGTGATTTTCGaatcttagaacatcattactgtgaaaaaact
tttgaaaaatattcatttagTCAAAGGATATCGCTATCTAGCTCAAagta
tatcaaaagttattagcATTTCAAAATTTACTGACAGCTAATgtgaaata
gactttaataaCGATCAAGATCATCATCGTCACTGCTTGAACTGATGACA
CGCTGCCTTTTCCTCTTCCCAGATTCAACGTCACTTTCAGATCCGCTTCC
CGACAGACTTGGGGAAGTCTCTTCGTTCACCGGTTCACGTTCACGTTCAC
GTTCGTCGTTCGCCGGTTCATCGTCGTCGATCTTCTCCTCTTCTCCTGGC
TTCGCATGCTTGAAGACGTTTCCAATGCAAGTTCGCAGATCTTGCTGCGT
TGGGCCTTTCGCAACGCCTTTGGAATTGACCTTCCTGAATAACTTTTGCC
CTGCATCAATCAGACATTTGAACGTCTTTGTGTTGCCAAACGGcttcttt
tttcgaatgtttcgtTTAACAGAAGCAGCCAAGTTAAATTTTGACTGGGT
TGTTCGATCCATTAAACTAAAA Run BLAST on NCBI transcript from alignment at sc0003327:10328..11441+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042283 ID=TCONS_00042283|Name=TCONS_00042283|organism=Clytia hemisphaerica|type=transcript|length=1114bp|location=Sequence derived from alignment at sc0003327:10328..11441+ (Clytia hemisphaerica)
CCCGTTACTTTAATTAGACACAGAAGAGGGACTTTCAAGGGAATGagatt
tttatcgaataataTCAAACAATAGAGCGTCGAATACGAGAGCTTATGAT
TATCGAATACTAGAGAGAATACGTTGAATTAGAGATCACCCACTTTAGAA
GTAAATATTAGTCTGTTATAATCCCTAATTTGTTCCTAAAGTATATTTCA
TATTAGCTGTCAGTAAATTTTGAAAtgctcataacttttgatatactTCG
AGCTAGATAGCGATTTTACGcgcattgaaaagataatcgtGAGTGGGATA
Ttatcaacaaaataaatttcgaaaaatttgtgaaaatgaagatgaaaaat
ggaaaagaaaaaatatcaactgcTGGTAGAATTGTGATATAATCACCATT
TTTACAAAGGTGATTTTCGaatcttagaacatcattactgtgaaaaaact
tttgaaaaatattcatttagTCAAAGGATATCGCTATCTAGCTCAAagta
tatcaaaagttattagcATTTCAAAATTTACTGACAGCTAATgtgaaata
gactttaataaCGATCAAGATCATCATCGTCACTGCTTGAACTGATGACA
CGCTGCCTTTTCCTCTTCCCAGATTCAACGTCACTTTCAGATCCGCTTCC
CGACAGACTTGGGGAAGTCTCTTCGTTCACCGGTTCACGTTCACGTTCAC
GTTCGTCGTTCGCCGGTTCATCGTCGTCGATCTTCTCCTCTTCTCCTGGC
TTCGCATGCTTGAAGACGTTTCCAATGCAAGTTCGCAGATCTTGCTGCGT
TGGGCCTTTCGCAACGCCTTTGGAATTGACCTTCCTGAATAACTTTTGCC
CTGCATATGTAACAAAAAAATAAGTCATTAGTAGTCACTATTCTCATTCC
CTTAAAAACCTTACAAATTATCTTTAGAAACGACGTTACGTTAGATGACG
TTCCCCGTTCGCTGCGTGCGTACTATATTGATGAAGCATGGAACTTACCA
ATCAGACATTTGAACGTCTTTGTGTTGCCAAACGGcttcttttttcgaat
gtttcgtTTAACAGAAGCAGCCAAGTTAAATTTTGACTGGGTTGTTCGAT
CCATTAAACTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042283-exon-sc0003327-1491911889:10328..11183 | TCONS_00042283-exon-sc0003327-1491911889:10328..11183 | Clytia hemisphaerica | exon |
| TCONS_00042283-exon-sc0003327-1510915933:10328..11183 | TCONS_00042283-exon-sc0003327-1510915933:10328..11183 | Clytia hemisphaerica | exon |
| TCONS_00042283-exon-sc0003327-1575043694:10328..11183 | TCONS_00042283-exon-sc0003327-1575043694:10328..11183 | Clytia hemisphaerica | exon |
| TCONS_00042283-exon-sc0003327-1491911889:11326..11441 | TCONS_00042283-exon-sc0003327-1491911889:11326..11441 | Clytia hemisphaerica | exon |
| TCONS_00042283-exon-sc0003327-1510915933:11326..11441 | TCONS_00042283-exon-sc0003327-1510915933:11326..11441 | Clytia hemisphaerica | exon |
| TCONS_00042283-exon-sc0003327-1575043694:11326..11441 | TCONS_00042283-exon-sc0003327-1575043694:11326..11441 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003327 | supercontig | sc0003327:10328..11441 + |
Blast
The following BLAST results are available for this feature:
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