TCONS_00042379 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042379
Unique NameTCONS_00042379
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042379 ID=TCONS_00042379|Name=TCONS_00042379|organism=Clytia hemisphaerica|type=transcript|length=135bp
GGTGGTTATTCTATGGTACCATTCAATAACTGTATCTGGGAAGCATTCTT
GAGTTGATTTGTTGTGGAGGaataatatttctatttttcgTGGTTTTGAG
AATTCTTACGATTCCTAAGCAATATTCTGAGTGTA
Run BLAST on NCBI

transcript from alignment at sc0003381:11383..11517

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042379 ID=TCONS_00042379|Name=TCONS_00042379|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at sc0003381:11383..11517 (Clytia hemisphaerica)
TACACTCAGAATATTGCTTAGGAATCGTAAGAATTCTCAAAACCAcgaaa
aatagaaatattattCCTCCACAACAAATCAACTCAAGAATGCTTCCCAG
ATACAGTTATTGAATGGTACCATAGAATAACCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026223XLOC_026223Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042379-exon-sc0003381-1491911889:11383..11517TCONS_00042379-exon-sc0003381-1491911889:11383..11517Clytia hemisphaericaexon
TCONS_00042379-exon-sc0003381-1510915933:11383..11517TCONS_00042379-exon-sc0003381-1510915933:11383..11517Clytia hemisphaericaexon
TCONS_00042379-exon-sc0003381-1575043694:11383..11517TCONS_00042379-exon-sc0003381-1575043694:11383..11517Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003381supercontigsc0003381:11383..11517 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042379 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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