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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042712 ID=TCONS_00042712|Name=TCONS_00042712|organism=Clytia hemisphaerica|type=transcript|length=1258bp
GACATACTGAAAGAATCGAAACGTTTAGTAGTGGACGTATTGACAGAAAT
AGTCAATGACCCCATCAACAACATTGTTATTGAAAACATACAGACACCTG
GAAACCTCAGAAGAGCCTTTGCCAGGACCTATTGAGACTACAAGAAACAC
CTCAATTTATTTTATCCTGTTCTGAACACTGTAAAGCTATCttagaaatt
tcatcaaaattcaaaCTTCACAAAGATACAGGTTTGGAAAAATTCTGGAG
TGAACTAACATCTTTgaatggaaaattgttctgGGTGCATGTGGTGTCAG
CTAACTCAGCTGAATTCTTCTCAGTGGCACACATACTATCAATAGAAATT
ACCAAAGGAATTTTTAAACCCTGACGGAAAAGGCGGAGAGCGACACAACA
GACATACCATTCTCAAAGTCTGAACAAGAAATAGTTGCATATGTTGGTGG
CTTTATTATCAACTGTTTTAAGAAGAGGTTTTATCGTCTAGTAAAGTCAC
CAAGACTGTCAACTCGCGAAGCAGCAGGCTGttcattgagatttttttct
tctattcaGCTGAGGGGTGCTGAAAAGCACTCCACAAACAGCTTTTTAGA
GTTTACGAGGAAATGGACTTTAACACAAGACCGAGGTGGCTTGATTTATT
TAAAGGATGTCTCCTTCATTTTCTTCCGTAGAATCGAAATGGTTGTTCGA
CGAGTTTTGAATGTGAAATTTTTAAGAGATTATAAATCTCAAGACTTGCG
TGATGTGTTGCTGACCAGGCTGATGAAAAACTACTTGGTTTTAAAAGGAT
TTTGTTCAAACAGATTTTGGAAAACTGGATTGATTTGAGACTCAGATCTT
ATGTGAGAGCCTTTGTGCAAGTcttgaaaagaagattttcaagagaaaag
tCTAAGAAAACTGATGGAGAAAAACTTGAGAAGCCAGCTTCTCAAATTGC
TGAACCAGGATTGAGAAAATCATTATATACTTGAGTATAAATTTTGGTTT
GTACTTAGCCTGAGTATATATgaccaacaatttttttattcataaaGTGT
AAGATTTTCaaaccaaatatttttcaaattatctgAATCTTCTCCCATAA
TGGCATTTTTTGTAATTGTTTCTAGATTTATGATTTTATTCAGCTGTCAT
ATTTATCAAGTCATCACATCACGTGCAATTATCATTTTTCTAATTGAACC
TCGCTTTATTCTTTCCCTTTCCTAATTATTACCACTTGGTTGCCAAATAG
TAGTATAC Run BLAST on NCBI transcript from alignment at sc0003618:3223..4480 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042712 ID=TCONS_00042712|Name=TCONS_00042712|organism=Clytia hemisphaerica|type=transcript|length=1258bp|location=Sequence derived from alignment at sc0003618:3223..4480 (Clytia hemisphaerica)
GTATACTACTATTTGGCAACCAAGTGGTAATAATTAGGAAAGGGAAAGAA
TAAAGCGAGGTTCAATTAGAAAAATGATAATTGCACGTGATGTGATGACT
TGATAAATATGACAGCTGAATAAAATCATAAATCTAGAAACAATTACAAA
AAATGCCATTATGGGAGAAGATTcagataatttgaaaaatatttggtttG
AAAATCTTACACtttatgaataaaaaaattgttggtcATATATACTCAGG
CTAAGTACAAACCAAAATTTATACTCAAGTATATAATGATTTTCTCAATC
CTGGTTCAGCAATTTGAGAAGCTGGCTTCTCAAGTTTTTCTCCATCAGTT
TTCTTAGacttttctcttgaaaatcttcttttcaagACTTGCACAAAGGC
TCTCACATAAGATCTGAGTCTCAAATCAATCCAGTTTTCCAAAATCTGTT
TGAACAAAATCCTTTTAAAACCAAGTAGTTTTTCATCAGCCTGGTCAGCA
ACACATCACGCAAGTCTTGAGATTTATAATCTCTTAAAAATTTCACATTC
AAAACTCGTCGAACAACCATTTCGATTCTACGGAAGAAAATGAAGGAGAC
ATCCTTTAAATAAATCAAGCCACCTCGGTCTTGTGTTAAAGTCCATTTCC
TCGTAAACTCTAAAAAGCTGTTTGTGGAGTGCTTTTCAGCACCCCTCAGC
tgaatagaagaaaaaaatctcaatgaaCAGCCTGCTGCTTCGCGAGTTGA
CAGTCTTGGTGACTTTACTAGACGATAAAACCTCTTCTTAAAACAGTTGA
TAATAAAGCCACCAACATATGCAACTATTTCTTGTTCAGACTTTGAGAAT
GGTATGTCTGTTGTGTCGCTCTCCGCCTTTTCCGTCAGGGTTTAAAAATT
CCTTTGGTAATTTCTATTGATAGTATGTGTGCCACTGAGAAGAATTCAGC
TGAGTTAGCTGACACCACATGCACCcagaacaattttccattcAAAGATG
TTAGTTCACTCCAGAATTTTTCCAAACCTGTATCTTTGTGAAGtttgaat
tttgatgaaatttctaaGATAGCTTTACAGTGTTCAGAACAGGATAAAAT
AAATTGAGGTGTTTCTTGTAGTCTCAATAGGTCCTGGCAAAGGCTCTTCT
GAGGTTTCCAGGTGTCTGTATGTTTTCAATAACAATGTTGTTGATGGGGT
CATTGACTATTTCTGTCAATACGTCCACTACTAAACGTTTCGATTCTTTC
AGTATGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042712-exon-sc0003618-1491911889:3223..4480 | TCONS_00042712-exon-sc0003618-1491911889:3223..4480 | Clytia hemisphaerica | exon |
| TCONS_00042712-exon-sc0003618-1510915933:3223..4480 | TCONS_00042712-exon-sc0003618-1510915933:3223..4480 | Clytia hemisphaerica | exon |
| TCONS_00042712-exon-sc0003618-1575043694:3223..4480 | TCONS_00042712-exon-sc0003618-1575043694:3223..4480 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003618 | supercontig | sc0003618:3223..4480 . |
Blast
The following BLAST results are available for this feature:
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