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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042810 ID=TCONS_00042810|Name=TCONS_00042810|organism=Clytia hemisphaerica|type=transcript|length=1458bp
tcccccatcccacttttcaggtgttcatttaggttcccactttaggttcc
caggttcccccatcccacttatccggtatgccaaAATTTTCGGTGTCTTT
GAACCAAAGAAATCTTCTTCAAACAATGCGATTTGCCAAGATGCTTTTTC
AAGATCACCGGAAATAACGAAATTATGTGCTCTCAATTTAATCAAAACGT
CCAACAGAGGAGTGGTTTTTGTTGGACCAGTATACAAAACATCATTTAAA
GAGGGTCCGCCCACTCGACTTTGCAACTAGCGTCAAAAACAATACGAAGG
GGTGTTGTTTGTTTATCAGTTCTTATAACCCCACGATGACTTAAATAATG
GGAGGTGCCAATAGAATATTTCTCACATTCTTCAATAACTTTCAAGTTTC
TTTGTTCATTTATAATTTGCTCATAATCTGCAAAAAGTTGTTTATCTTAT
GAAAACTGTTCATGCAGGTGTTGTAACGTTTTTTAACGGTTCTGTAATTA
TCTCCTAAAGGTtcagaattttctttgaaaggaAGTGAAAAATGATATCT
TCCTTCCTCGAAAACagtcgatttttcaaaatcttgtaaAAGAGTTATAT
CCTCCTCTGTTAAAGTTTTTCTCCAATCAGTNGAAAACagtcgatttttc
aaaatcttgtaaAACAGTTATATCCTCCTCTGttaaattttttctccaat
caGTATCATAAGCTTTATTTAGATCTGTAAGTTTATCCTCAGTTCGATCT
GTTTGCACTGCGCGCATAAAATGAGTACTAACAACGTTTGCGGTGGAGCT
TTTAATCTTTTCCCCTCCTTCAACTGGACCGCTCAAAACATGTGTTCTGA
CGATATAGCAGTAGGGCCATTTCGACTACGTATCTGTTTCTGACCAATAA
AGTTCCAATAATCTGCTGAGCCGATCAACACGTCTATCTGTAACGGTAGA
TTGTCGGGATTCTGNAATAACCGCTCCTCTGTTGGACGTTTTGATTAAAT
TGAGAGCACATAATTTCGTTATTTCCGGTGATCTTGAAAAAGCATTTTGG
CAAATCACATTGTTTGAAGAAGATAAAAACTTTGTGAGATTTCTTTGGTT
CAAAGACACCGAAAATTTTGACTTCGAAAAANACATAATTTCGTTATTTC
CGGTGATCTTGAAAAAGCATTTTGGCAAATCGCATTGTTTGAAGAAGATA
AAAACTTTGTGAGATTTCTTTGGTTCAAAGACACCGAAAATTTTGACTTC
GAAAACTTTGAGAACAATGAACTTATTGAATTACGATTTACACGTGTTAT
TTTTGGTTTGAATTCCTCGCCCTTTTTATTGCAAGCGACACTTCAAAAAC
ACATCGAAACCCATTGTGAGGATGAtttgaaagaaactttgaaaGGAGCT
CTTCATGTTGATGATCTCAATAGTGGtgcaaaaacaatcaaacaagcTGA
ATCTCTTT Run BLAST on NCBI transcript from alignment at sc0003697:4629..6086 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042810 ID=TCONS_00042810|Name=TCONS_00042810|organism=Clytia hemisphaerica|type=transcript|length=1458bp|location=Sequence derived from alignment at sc0003697:4629..6086 (Clytia hemisphaerica)
AAAGAGATTCAgcttgtttgattgtttttgcaCCACTATTGAGATCATCA
ACATGAAGAGCTCCtttcaaagtttctttcaaaTCATCCTCACAATGGGT
TTCGATGTGTTTTTGAAGTGTCGCTTGCAATAAAAAGGGCGAGGAATTCA
AACCAAAAATAACACGTGTAAATCGTAATTCAATAAGTTCATTGTTCTCA
AAGTTTTCGAAGTCAAAATTTTCGGTGTCTTTGAACCAAAGAAATCTCAC
AAAGTTTTTATCTTCTTCAAACAATGCGATTTGCCAAAATGCTTTTTCAA
GATCACCGGAAATAACGAAATTATGTNTTTTTCGAAGTCAAAATTTTCGG
TGTCTTTGAACCAAAGAAATCTCACAAAGTTTTTATCTTCTTCAAACAAT
GTGATTTGCCAAAATGCTTTTTCAAGATCACCGGAAATAACGAAATTATG
TGCTCTCAATTTAATCAAAACGTCCAACAGAGGAGCGGTTATTNCAGAAT
CCCGACAATCTACCGTTACAGATAGACGTGTTGATCGGCTCAGCAGATTA
TTGGAACTTTATTGGTCAGAAACAGATACGTAGTCGAAATGGCCCTACTG
CTATATCGTCAGAACACATGTTTTGAGCGGTCCAGTTGAAGGAGGGGAAA
AGATTAAAAGCTCCACCGCAAACGTTGTTAGTACTCATTTTATGCGCGCA
GTGCAAACAGATCGAACTGAGGATAAACTTACAGATCTAAATAAAGCTTA
TGATACtgattggagaaaaaatttaaCAGAGGAGGATATAACTGTTttac
aagattttgaaaaatcgactGTTTTCNACTGATTGGAGAAAAACTTTAAC
AGAGGAGGATATAACTCTTttacaagattttgaaaaatcgactGTTTTCG
AGGAAGGAAGATATCATTTTTCACTtcctttcaaagaaaattctgaACCT
TTAGGAGATAATTACAGAACCGTTAAAAAACGTTACAACACCTGCATGAA
CAGTTTTCATAAGATAAACAACTTTTTGCAGATTATGAGCAAATTATAAA
TGAACAAAGAAACTTGAAAGTTATTGAAGAATGTGAGAAATATTCTATTG
GCACCTCCCATTATTTAAGTCATCGTGGGGTTATAAGAACTGATAAACAA
ACAACACCCCTTCGTATTGTTTTTGACGCTAGTTGCAAAGTCGAGTGGGC
GGACCCTCTTTAAATGATGTTTTGTATACTGGTCCAACAAAAACCACTCC
TCTGTTGGACGTTTTGATTAAATTGAGAGCACATAATTTCGTTATTTCCG
GTGATCTTGAAAAAGCATCTTGGCAAATCGCATTGTTTGAAGAAGATTTC
TTTGGTTCAAAGACACCGAAAATTttggcataccggataagtgggatggg
ggaacctgggaacctaaagtgggaacctaaatgaacacctgaaaagtggg
atggggga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042810-exon-sc0003697-1491911889:4629..6086 | TCONS_00042810-exon-sc0003697-1491911889:4629..6086 | Clytia hemisphaerica | exon |
| TCONS_00042810-exon-sc0003697-1510915933:4629..6086 | TCONS_00042810-exon-sc0003697-1510915933:4629..6086 | Clytia hemisphaerica | exon |
| TCONS_00042810-exon-sc0003697-1575043694:4629..6086 | TCONS_00042810-exon-sc0003697-1575043694:4629..6086 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003697 | supercontig | sc0003697:4629..6086 . |
Blast
The following BLAST results are available for this feature:
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