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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042882 ID=TCONS_00042882|Name=TCONS_00042882|organism=Clytia hemisphaerica|type=transcript|length=1101bp
ccacACAGGTTTCGGATCTACCGTCTTAATTAAAATATCGTACCCCGTAC
AAGTCGTTAATTGTTGGTTCAGCCAAATTTCCTAAAAAAGGtaagaaaac
tttaaattttcgtCAAAAGTAAATCACGCTTTGGTTGGGCACGAAGTGAA
CAGTGAATTTGAAAAGGTATAGGGCACGAAGTGAACAGTCTTTTGAAAAG
GGTTCGGGCACGAAGTGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAGT
GAACAGTCTTTTGAAAAGGGTTCGGGCACGAAGTGAACAgtcttttgaaa
aagatttgggCACGAAGTGAACAGTGAATTTTGAAAAGGGTTCGGGCACG
AAGTGAACAGTGAATTTTAAAAAGGGTTTGGGTACGAAGTGAAcagtgaa
ttttgaaaaattttgctgcGCCATTAAATAACGAGTCTTTTTTTTCACAC
AGGTTTCGGATCTACCGTCTTAATAAAAATATCGTACCCCGTACAAGTCG
TTAACTGTTGGTTCagccaaattttctaaaaaaggtaagaaaactttaaa
ttttcgcAAAAAGTAAATCACCCCTCTTTGGTTGGGCACGAAGTGAACAG
TGATTTTGAAAAGGTATAGGGCACGAAGTGAACAGTCTTTTGAAAAGGGT
TCGGGCACGAAATGAACAgtgttttgaaaaaggtttgGGCACGAAGTGAA
cagtgaattttgaaaaattttgctcCGCCATTAAATAACGAGTCTTTCTT
TTTCCACACAGGTTTCGGATCTACCGTCTTAATTANAAATTTTGGTCCGC
CATTAAATaacgagttttttttttcacacaggTTTCGGATCTATCGTCTT
AATTGAAATATCGTACCCCGTACAAGTCGTTTATTGTTGGTTCaaccaaa
ttttctaaaaaaggtaggaaaactttaaattttcgcAAAAAGTAAATCAG
GGCACGAAGTGAACAGTCTTTTTTAAAGGGTTCGGGCACGAAGTGAAcgg
tgaattttgaaaaattttggtccGCCATTAAATaacgagttttttttttc
acacaggTTTCGGATCTATCGTCTTAATTGAAATATCGTACCCCGTACAA
G Run BLAST on NCBI transcript from alignment at sc0003755:69..1169+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042882 ID=TCONS_00042882|Name=TCONS_00042882|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at sc0003755:69..1169+ (Clytia hemisphaerica)
ccacACAGGTTTCGGATCTACCGTCTTAATTAAAATATCGTACCCCGTAC
AAGTCGTTAATTGTTGGTTCAGCCAAATTTCCTAAAAAAGGtaagaaaac
tttaaattttcgtCAAAAGTAAATCACGCTTTGGTTGGGCACGAAGTGAA
CAGTGAATTTGAAAAGGTATAGGGCACGAAGTGAACAGTCTTTTGAAAAG
GGTTCGGGCACGAAGTGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAGT
GAACAGTCTTTTGAAAAGGGTTCGGGCACGAAGTGAACAgtcttttgaaa
aagatttgggCACGAAGTGAACAGTGAATTTTGAAAAGGGTTCGGGCACG
AAGTGAACAGTGAATTTTAAAAAGGGTTTGGGTACGAAGTGAAcagtgaa
ttttgaaaaattttgctgcGCCATTAAATAACGAGTCTTTTTTTTCACAC
AGGTTTCGGATCTACCGTCTTAATAAAAATATCGTACCCCGTACAAGTCG
TTAACTGTTGGTTCagccaaattttctaaaaaaggtaagaaaactttaaa
ttttcgcAAAAAGTAAATCACCCCTCTTTGGTTGGGCACGAAGTGAACAG
TGATTTTGAAAAGGTATAGGGCACGAAGTGAACAGTCTTTTGAAAAGGGT
TCGGGCACGAAATGAACAgtgttttgaaaaaggtttgGGCACGAAGTGAA
cagtgaattttgaaaaattttgctcCGCCATTAAATAACGAGTCTTTCTT
TTTCCACACAGGTTTCGGATCTACCGTCTTAATTANAAATTTTGGTCCGC
CATTAAATaacgagttttttttttcacacaggTTTCGGATCTATCGTCTT
AATTGAAATATCGTACCCCGTACAAGTCGTTTATTGTTGGTTCaaccaaa
ttttctaaaaaaggtaggaaaactttaaattttcgcAAAAAGTAAATCAG
GGCACGAAGTGAACAGTCTTTTTTAAAGGGTTCGGGCACGAAGTGAAcgg
tgaattttgaaaaattttggtccGCCATTAAATaacgagttttttttttc
acacaggTTTCGGATCTATCGTCTTAATTGAAATATCGTACCCCGTACAA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042882-exon-sc0003755-1491911889:69..1169 | TCONS_00042882-exon-sc0003755-1491911889:69..1169 | Clytia hemisphaerica | exon |
| TCONS_00042882-exon-sc0003755-1510915933:69..1169 | TCONS_00042882-exon-sc0003755-1510915933:69..1169 | Clytia hemisphaerica | exon |
| TCONS_00042882-exon-sc0003755-1575043694:69..1169 | TCONS_00042882-exon-sc0003755-1575043694:69..1169 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003755 | supercontig | sc0003755:69..1169 + |
Blast
The following BLAST results are available for this feature:
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