TCONS_00043027 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043027
Unique NameTCONS_00043027
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043027 ID=TCONS_00043027|Name=TCONS_00043027|organism=Clytia hemisphaerica|type=transcript|length=152bp
GTTTTCTATCAAGAGGGGAAAGAAGTTTTCACGTTGTCACCGTGGATTAG
GATGGGATTATGGTACCCTCCCTGTCTGTCAACctGACATATGTGAGCAT
AGCGACATATCGCATGGTACCGCTAAACCATACAGGGATGTGTATGCAGT
TG
Run BLAST on NCBI

transcript from alignment at sc0003863:7975..8352+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043027 ID=TCONS_00043027|Name=TCONS_00043027|organism=Clytia hemisphaerica|type=transcript|length=378bp|location=Sequence derived from alignment at sc0003863:7975..8352+ (Clytia hemisphaerica)
GTTTTCTATCAAGAGGGGAAAGAAGTTTTCACGTTGTCACCGTGGATTAG
GATGGGATTATGGTACCCTCCCTGTCTGTCAACGTAAGGAAACTTTCACt
agatgtttttttataagattagcTCTATCAATTATTGGTTTAGTGAACAA
ATCAACACAGAAAGTGCCCGATACCAAAGAGTGCGTTTCCATTAAAATCT
TACAAGACGAGTtgcaaatttacaaatttacatTACTTGGGAGTTTCATG
CTCCGTGaaagttaaaaaacaaaattcattcattcatggaatatttcttc
ttttttcagctGACATATGTGAGCATAGCGACATATCGCATGGTACCGCT
AAACCATACAGGGATGTGTATGCAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026772XLOC_026772Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043027-exon-sc0003863-1491911889:7975..8057TCONS_00043027-exon-sc0003863-1491911889:7975..8057Clytia hemisphaericaexon
TCONS_00043027-exon-sc0003863-1510915933:7975..8057TCONS_00043027-exon-sc0003863-1510915933:7975..8057Clytia hemisphaericaexon
TCONS_00043027-exon-sc0003863-1575043694:7975..8057TCONS_00043027-exon-sc0003863-1575043694:7975..8057Clytia hemisphaericaexon
TCONS_00043027-exon-sc0003863-1491911889:8284..8352TCONS_00043027-exon-sc0003863-1491911889:8284..8352Clytia hemisphaericaexon
TCONS_00043027-exon-sc0003863-1510915933:8284..8352TCONS_00043027-exon-sc0003863-1510915933:8284..8352Clytia hemisphaericaexon
TCONS_00043027-exon-sc0003863-1575043694:8284..8352TCONS_00043027-exon-sc0003863-1575043694:8284..8352Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003863supercontigsc0003863:7975..8352 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043027 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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