|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043061 ID=TCONS_00043061|Name=TCONS_00043061|organism=Clytia hemisphaerica|type=transcript|length=1087bp
gataccaaatttataaagattgaagaattccttcaaaagttataggtaaa
tgaaaaaagagtgcacacttatcgtgaatagactttagttgaAGCTAGCT
AGGCTATAGTCTGCTTATTATCTAAAGTCTGGAAAATTTGGTTGGTGTGT
TTCCATAGAAAGAAGGTATCATATTTTGGTTTCAATTCTCGAAATCTGTT
GTCTGTGTCACTGTGATAACAGTACGTCCCAGCCTCAACAAAGTTCATTC
AATGTCAACTGTTAATTGGCAACCTTCTGACCTTACACCAATGTAGCAAC
TGCAAGATCATAAGTTATACCATGACTTTCGTTACAAATAGCAGATAACA
GATTGTTGGTGGTCATAAAGTGTTGAAGTcaaccaaaagaaaaaaatcac
taaaGAGAACATACACATAAATCACTAAATGTAAGGAATTATGACTGATT
CACTGCCACTgtacaaagatgaaaaattttgcCCAACCATTGTGAGTTAT
CAACTTAAAACTTAACCTGATCTGAACAAACCTAAAACTGTCCGCAGCAG
TCTGGCAGTGTATAAAGCATCCATATTGTCTTCACTTCCTTTCAAGCTCA
CTGTTAATCAAGTCACCAAGTAATTGCAAATTGGCATTTTTATCTTTCAT
GGGATGTGTGAtttgagaaattgaaaaaacattTGAGAATTTACGGAGTT
ACGGTTATGGGTGTGTTCACATAGAGAAAGTTTCTGCTTCGCATCTATTG
TTTTNTACGGAGTTACGGTTATGGGTGTGATCGCATAGAGAAAGTTTCTG
CTTCGcatctattgttttattttcaaaacaaagctaaAACGCATACGTag
atttttatttgataaactGTTAGTTGTTATTATCcgcaaaacatgaaaaa
aaatgaatacgTAGGGGTGTTAcggtcactttcggtcggggttgtgaaTG
GTGAAATGTGTTGTTCCTTTTTAATGTTGCGAAGTAGGTACTTTCTCCCC
CTTTGATGACAATTAATGGGTTAATAGAGACTTTCAACAGAGTTGATatt
ttatttgtcttttttaaACCCATTACATATAGATTAT Run BLAST on NCBI transcript from alignment at sc0003896:4126..5212 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043061 ID=TCONS_00043061|Name=TCONS_00043061|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at sc0003896:4126..5212 (Clytia hemisphaerica)
ATAATCTATATGTAATGGGTttaaaaaagacaaataaaatATCAACTCTG
TTGAAAGTCTCTATTAACCCATTAATTGTCATCAAAGGGGGAGAAAGTAC
CTACTTCGCAACATTAAAAAGGAACAACACATTTCACCAttcacaacccc
gaccgaaagtgaccgTAACACCCCTAcgtattcattttttttcatgtttt
gcgGATAATAACAACTAACagtttatcaaataaaaatctACGTATGCGTT
ttagctttgttttgaaaataaaacaatagatgCGAAGCAGAAACTTTCTC
TATGCGATCACACCCATAACCGTAACTCCGTANAAAACAATAGATGCGAA
GCAGAAACTTTCTCTATGTGAACACACCCATAACCGTAACTCCGTAAATT
CTCAaatgttttttcaatttctcaaaTCACACATCCCATGAAAGATAAAA
ATGCCAATTTGCAATTACTTGGTGACTTGATTAACAGTGAGCTTGAAAGG
AAGTGAAGACAATATGGATGCTTTATACACTGCCAGACTGCTGCGGACAG
TTTTAGGTTTGTTCAGATCAGGTTAAGTTTTAAGTTGATAACTCACAATG
GTTGGgcaaaatttttcatctttgtacAGTGGCAGTGAATCAGTCATAAT
TCCTTACATTTAGTGATTTATGTGTATGTTCTCtttagtgatttttttct
tttggttgACTTCAACACTTTATGACCACCAACAATCTGTTATCTGCTAT
TTGTAACGAAAGTCATGGTATAACTTATGATCTTGCAGTTGCTACATTGG
TGTAAGGTCAGAAGGTTGCCAATTAACAGTTGACATTGAATGAACTTTGT
TGAGGCTGGGACGTACTGTTATCACAGTGACACAGACAACAGATTTCGAG
AATTGAAACCAAAATATGATACCTTCTTTCTATGGAAACACACCAACCAA
ATTTTCCAGACTTTAGATAATAAGCAGACTATAGCCTAGCTAGCTtcaac
taaagtctattcacgataagtgtgcactcttttttcatttacctataact
tttgaaggaattcttcaatctttataaatttggtatc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043061-exon-sc0003896-1491911889:4126..5212 | TCONS_00043061-exon-sc0003896-1491911889:4126..5212 | Clytia hemisphaerica | exon |
| TCONS_00043061-exon-sc0003896-1510915933:4126..5212 | TCONS_00043061-exon-sc0003896-1510915933:4126..5212 | Clytia hemisphaerica | exon |
| TCONS_00043061-exon-sc0003896-1575043694:4126..5212 | TCONS_00043061-exon-sc0003896-1575043694:4126..5212 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003896 | supercontig | sc0003896:4126..5212 . |
Blast
The following BLAST results are available for this feature:
|
