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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043110 ID=TCONS_00043110|Name=TCONS_00043110|organism=Clytia hemisphaerica|type=transcript|length=756bp
NNAAGTGTAAGGGGTTACGAAGTAACCCACACCCCCAAAACCACCGCCAA
ATCTAACATAGGATCGCCATTACGCATAGAACGTTTATGATCGATATGGG
TCCCGAGACAGGTCTTAGGAGTAGATACGATGATTGGGGTCGTTGCCTAA
ACCAGAGGTAGGCCAAGGGTGATTAAAAAGAATGCATGATGCTGTGAGAC
Ggcacgaaaaattgaaaacttgaccgcgggacggcataataaaatttgca
aattaagCTGCGGGACGGCATGAAAATTGAAGAGCTAAACCGCGGGACGG
CATAATAATAAAGTTGGCAAGTTGAGCTGCGGGACGGcacgataaaatta
aaatttttggcatggaaattgaaaagataagccgCGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCC
CAGTGAATTCACCCAAAGCGCAATGTGCTCGAAATTGAAGCGGATTCAGA
CAATTTCGaggtctccagcctgcccaCATTTTTGTAAGTTTAGGACAAAA
ACCAGTAACCCCACCCCCAAAATCCAATAGAGTATGAAGCACACCCAGGG
ATACACTCAAGGAACTTGTGTGCAAAATTCGCACCAATCAACCTCTAGGA
ACAAGCATGCAAAATATTAAATACTTCATAGTATTGACCAAGGTATACCA
GAACCTATGGAGTCGTCCCTCCCATCtaaattcaattaaaaatgagAGGA
ATGCCC Run BLAST on NCBI transcript from alignment at sc0003923:4706..5527+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043110 ID=TCONS_00043110|Name=TCONS_00043110|organism=Clytia hemisphaerica|type=transcript|length=822bp|location=Sequence derived from alignment at sc0003923:4706..5527+ (Clytia hemisphaerica)
NNAAGTGTAAGGGGTTACGAAGTAACCCACACCCCCAAAACCACCGCCAA
ATCTAACATAGGATCGCCATTACGCATAGAACGTTTATGATCGATATGGG
TCCCGAGACAGGTCTTAGGAGTAGATACGATGATTGGGGTCGTTGCCTAA
ACCAGAGGTAGGCCAAGGGTGATTAAAAAGAATGCATGATGCTGTGAGAC
GgcacgaaaaattgaaaacttgagcCACGGGACGGcataataaaattgaa
attttgagccgcgggacggcatgaaaattgaagagctagccgcgggacgg
cataataaaatttgcaaattaagCTGCGGGACGGCATGAAAATTGAAGAG
CTAAACCGCGGGACGGCATAATAATAAAGTTGGCAAGTTGAGCTGCGGGA
CGGcacgataaaattaaaatttttggcatggaaattgaaaagataagccg
CGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGCCCCAGTGAATTCACCCAAAGCGCAATGTGCTCGAAA
TTGAAGCGGATTCAGACAATTTCGaggtctccagcctgcccaCATTTTTG
TAAGTTTAGGACAAAAACCAGTAACCCCACCCCCAAAATCCAATAGAGTA
TGAAGCACACCCAGGGATACACTCAAGGAACTTGTGTGCAAAATTCGCAC
CAATCAACCTCTAGGAACAAGCATGCAAAATATTAAATACTTCATAGTAT
TGACCAAGGTATACCAGAACCTATGGAGTCGTCCCTCCCATCtaaattca
attaaaaatgagAGGAATGCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043110-exon-sc0003923-1491911889:4706..4928 | TCONS_00043110-exon-sc0003923-1491911889:4706..4928 | Clytia hemisphaerica | exon |
| TCONS_00043110-exon-sc0003923-1510915933:4706..4928 | TCONS_00043110-exon-sc0003923-1510915933:4706..4928 | Clytia hemisphaerica | exon |
| TCONS_00043110-exon-sc0003923-1575043694:4706..4928 | TCONS_00043110-exon-sc0003923-1575043694:4706..4928 | Clytia hemisphaerica | exon |
| TCONS_00043110-exon-sc0003923-1491911889:4995..5527 | TCONS_00043110-exon-sc0003923-1491911889:4995..5527 | Clytia hemisphaerica | exon |
| TCONS_00043110-exon-sc0003923-1510915933:4995..5527 | TCONS_00043110-exon-sc0003923-1510915933:4995..5527 | Clytia hemisphaerica | exon |
| TCONS_00043110-exon-sc0003923-1575043694:4995..5527 | TCONS_00043110-exon-sc0003923-1575043694:4995..5527 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003923 | supercontig | sc0003923:4706..5527 + |
Blast
The following BLAST results are available for this feature:
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