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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043188 ID=TCONS_00043188|Name=TCONS_00043188|organism=Clytia hemisphaerica|type=transcript|length=532bp
TACGATAGAAAGCATTGAATCTAAAAGCATTGAATTATCACACCCAGCAG
GTACTTAACAATCTCAGATACTTCAGAGACGGGAGAATATTATCAATAAC
GCTCTGGTTGGCTCTAAAATTTGTTGACAAAATGATAAGAGAAAACGTAc
gatacacccctgtttcagtgacccGGTCAAGGATCCGTCCCNCCGATTAT
TTATTGCCAATTGTTCCACTAGGAAGGGGCTCCACCGTGTCATACTTTCT
TGCCTCTTTTAGTTTACCAATTTCCGCTCGCAGAAATAtttgcacccctg
tctcagagaTGATTTAAGCCAGGGAACGTGAGACCTCCGAGAGAATGAAC
AGCATATGAACGAACGGGAAATTATGTCTTATTTCATACTGTACCCTGTC
TCATTATCAAGCCTTTAGAAATATTCTCTTTCGTCAAAGACATTTCCTAG
GAAGGACGAGAGACCGCGGCGTCCGTTACTTTAAtaaatgttcttatctt
gttgTAAAGTGTTTGTAGCCTTACCCTTCCCA Run BLAST on NCBI transcript from alignment at sc0003987:2578..3795- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043188 ID=TCONS_00043188|Name=TCONS_00043188|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at sc0003987:2578..3795- (Clytia hemisphaerica)
TACGATAGAAAGCATTGAATCTAAAAGCATTGAATTATCACACCCAGCAG
GTGCGTATTTCTTTTTTACCTAAGAAGAGTCTAGCACACCCACACCCACA
CTCCTGTTTCACAGGCCATGTTAGGTTACTTTAATCGTAGAAATTTTAGC
GAGACTAATTTTAGCGTTTTAGCGAGTTTTCACTATTTTCGCTAAAATAA
ATCTCGCTAAAACACGCTGAATCGACAGATCGCTAAAATTTATCCTCGCG
AAATTTCTGGTTATATTGCCTTGATACATTTTTATCAATAGGAAGGGTTT
CAGTGCAAATAAATGCTAGAAAACGAATTCAGTCAATAATGTAATACGAG
TATTCGCTAAAATTTATCCACGCGAAATTTTTTGAAATCGTGATTCGCTA
AAATAAATCCAAAAAAAATCAAGATTTTTCTGACTCGCTAATATACGCTA
AAATTAGTCTCGCTAAAATTTCTACGATTAAAGTAATAGAAATTGCGCTC
GAAAAAAACCCAGTGTTCATATCCCGTTGTTTACGGACATTTTAAATGAA
CACTGTTTTGACGTTTAGCGTCCATTGAATACCCCTGTCTCGAGTATCAT
TCGACCGCTACAAATGCCCCGTGAAAAGCTATCCTTTTCTACTTTCGCAG
TGATACTGGGTGTGATAGCTGAGTCGATAAAAAGAATAGAGAAATTAATC
CGATCATCGTATATTTTTGTTTTCTCCTTATTTCAGGTACTTAACAATCT
CAGATACTTCAGAGACGGGAGAATATTATCAATAACGCTCTGGTTGGCTC
TAAAATTTGTTGACAAAATGATAAGAGAAAACGTACGATACACCCCTGTT
TCAGTGACCCGGTCAAGGATCCGTCCCNCCGATTATTTATTGCCAATTGT
TCCACTAGGAAGGGGCTCCACCGTGTCATACTTTCTTGCCTCTTTTAGTT
TACCAATTTCCGCTCGCAGAAATATTTGCACCCCTGTCTCAGAGATGATT
TAAGCCAGGGAACGTGAGACCTCCGAGAGAATGAACAGCATATGAACGAA
CGGGAAATTATGTCTTATTTCATACTGTACCCTGTCTCATTATCAAGCCT
TTAGAAATATTCTCTTTCGTCAAAGACATTTCCTAGGAAGGACGAGAGAC
CGCGGCGTCCGTTACTTTAATAAATGTTCTTATCTTGTTGTAAAGTGTTT
GTAGCCTTACCCTTCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043188-exon-sc0003987-1575043694:3746..3795 | TCONS_00043188-exon-sc0003987-1575043694:3746..3795 | Clytia hemisphaerica | exon |
| TCONS_00043188-exon-sc0003987-1575043694:2578..3059 | TCONS_00043188-exon-sc0003987-1575043694:2578..3059 | Clytia hemisphaerica | exon |
| TCONS_00043188-exon-sc0003987-1510915933:3746..3795 | TCONS_00043188-exon-sc0003987-1510915933:3746..3795 | Clytia hemisphaerica | exon |
| TCONS_00043188-exon-sc0003987-1510915933:2578..3059 | TCONS_00043188-exon-sc0003987-1510915933:2578..3059 | Clytia hemisphaerica | exon |
| TCONS_00043188-exon-sc0003987-1491911889:3746..3795 | TCONS_00043188-exon-sc0003987-1491911889:3746..3795 | Clytia hemisphaerica | exon |
| TCONS_00043188-exon-sc0003987-1491911889:2578..3059 | TCONS_00043188-exon-sc0003987-1491911889:2578..3059 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003987 | supercontig | sc0003987:2578..3795 - |
Blast
The following BLAST results are available for this feature:
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