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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043257 ID=TCONS_00043257|Name=TCONS_00043257|organism=Clytia hemisphaerica|type=transcript|length=783bp
TGTAGTTCTCTTTTCTAGAAAATGAATACGTAAAGAAAAtttacacaaaa
aaatattaaatgatATAAAGAAGTTACAAGTTACAATTTAGAAGGGAAGA
GACACCACAATAATTTGTTTTTCTGGATACACTTTATGTACTAGTTTCGA
ATGATTGATTAAGTCATTTGaacttaaaaaacaatttttgttgaTGGTTC
GCATGATAACCATGTTTTAACAATAatattcTGCTATTTTTGTTCATGGA
CGTGTATATGTTGGGTCAAATAGAAGGAAaagattttcccattttttcTA
GGCTTTATCCTACAGTCAAATCattctttgtctttttctttcgaGAATTA
TTTTTCCCCAACtagagaatttcaaaaaaaaaattatacattatATACTG
TCTGAGAGCCTCTGTGTGACGCACAAACTAGGTTGATTGCAAGGGaatgt
gaaaaaaattggaGGAAGAAATCTGAAATATAAGAAAAGAATCGACTGTG
TCTCATTGGGGATGTGTGAGGTcccaagaaaagaaaaaagtaaatttttc
tttctttctcattttctCTTTGCTTCAAAAAGTCTGTGAACCTTATAAAT
CACCTTCTAAATCTTAAATTTCCTCACTGGGAGGAGGATAGAATTTGTAT
CAAAAATTAGAAGtattttgtatgttttttgtCGTCTAGATTTTAAAAAG
TCTACTTTTATCGTAAAAGACGAAGCTAAGCAACGCTAAGTTTGATTGGg
aaatgttaaaatatttcgagATCGAAATTTATA Run BLAST on NCBI transcript from alignment at sc0004070:725..4154+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043257 ID=TCONS_00043257|Name=TCONS_00043257|organism=Clytia hemisphaerica|type=transcript|length=3430bp|location=Sequence derived from alignment at sc0004070:725..4154+ (Clytia hemisphaerica)
TGTAGTTCTCTTTTCTAGAAAATGAATACGTAAAGAAAAtttacacaaaa
aaatattaaatgatATAAAGAAGTTACAAGTTACAATTTAGAAGGGAAGA
GACACCACAATAATTTGTTTTTCTGGATACACTTTATGTACTAGTTTCGA
ATGATTGATTAAGTCATTTGaacttaaaaaacaatttttgttgaTGGTTC
GCATGATAACCATGTTTTAACAATAGTAAGTACAACTTATTTTTTACAGA
ATAATCTGTAACGCGATTGCCCGGGGGGNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNccccccccccgggatccaTTACTTACTAAAAAAA
CATATAGATTCGAAAGTTTTTGTATGGAAAGTCCTTCCTTATTTTTTCTG
AtaccatcttgttttgtttgccTGGGACAAACACCAGAATATACATCTCT
CTCATTAGAATATCCATTAGCATTATAGGAATCTCAAAGAGTGgtctttt
ctttaaaaaatgcgTTAAATATTGCGGAATCATACTTGAAATGCTACATC
TGTTTTTGAACATTGTAGGAGTTAAAACCTGAGAACTGCAATTTTTTAGA
AAGTcgataaattatttttgcttcTAAGTGAACTTTTCCTATATTGAgtg
ttttgttcatttttctaattctaatagaaagagagagagagccTTCTGTG
TTGATGATTTTTATCCCTTCAAACAAAATCAACGTTTACCTTTTACATTT
GCACTTTTCTACGTTTGTCTATGTGTGAGGTTGATGTTTAGAGCAAATTT
TTAATCGAAGAAAAGATATAGTAAAGGTGCAGTATATTTTTTATCGTTAT
cttttatgtctttttttttcagatattcTGCTATTTTTGTTCATGGACGT
GTATATGTTGGGTCAAATAGAAGGAAaagattttcccattttttcTAGGC
TTTATCCTACAGTCAAATCattctttgtctttttctttcgaGAATTATTT
TTCCCCAACtagagaatttcaaaaaaaaaattatacattatATACTGTCT
GAGAGCCTCTGTGTGACGCACAAACTAGGTTGATTGCAAGGGaatgtgaa
aaaaattggaGGAAGAAATCTGAAATATAAGAAAAGAATCGACTGTGTCT
CATTGGGGATGTGTGAGGTcccaagaaaagaaaaaagtaaatttttcttt
ctttctcattttctCTTTGCTTCAAAAAGTCTGTGAACCTTATAAATCAC
CTTCTAAATCTTAAATTTCCTCACTGGGAGGAGGATAGAATTTGTATCAA
AAATTAGAAGtattttgtatgttttttgtCGTCTAGATTTTAAAAAGTCT
ACTTTTATCGTAAAAGACGAAGCTAAGCAACGCTAAGTTTGATTGGgaaa
tgttaaaatatttcgagATCGAAATTTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043257-exon-sc0004070-1491911889:725..949 | TCONS_00043257-exon-sc0004070-1491911889:725..949 | Clytia hemisphaerica | exon |
| TCONS_00043257-exon-sc0004070-1510915933:725..949 | TCONS_00043257-exon-sc0004070-1510915933:725..949 | Clytia hemisphaerica | exon |
| TCONS_00043257-exon-sc0004070-1575043694:725..949 | TCONS_00043257-exon-sc0004070-1575043694:725..949 | Clytia hemisphaerica | exon |
| TCONS_00043257-exon-sc0004070-1491911889:3597..4154 | TCONS_00043257-exon-sc0004070-1491911889:3597..4154 | Clytia hemisphaerica | exon |
| TCONS_00043257-exon-sc0004070-1510915933:3597..4154 | TCONS_00043257-exon-sc0004070-1510915933:3597..4154 | Clytia hemisphaerica | exon |
| TCONS_00043257-exon-sc0004070-1575043694:3597..4154 | TCONS_00043257-exon-sc0004070-1575043694:3597..4154 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004070 | supercontig | sc0004070:725..4154 + |
Blast
The following BLAST results are available for this feature:
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