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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043353 ID=TCONS_00043353|Name=TCONS_00043353|organism=Clytia hemisphaerica|type=transcript|length=1128bp
AGAAGTCAAAGAATTCAAGCCATCGTTAGGGCAAAAGCCACCCCGTGACG
AATCTTCAACAACCCAGTCTTCAACAACCCAGTCTTCAACAACCCAGTCT
TCAACAACCCAGTCTTCAACGGTGCCTCTAGAAGAAGCCTTGGAAGTTCT
TGAAGAAGGAAATGTTTAATATTTAAAAGTactcgattgtggtttcaaaa
cttcccggtgaatttcccttttttctcaaatattatgaccttgattgtag
cttTGATTGTgagttttgtataagattcccattacTGCACTAAGtaactt
tccgaagctcatTTTTAACTATCctaagtcctggtctttttccgctagaa
aagtggcaTTTTTAGCGATTCTCTATTTAGCTCTAGTTCGCATTCCGTTT
AGCCTGATTCATTTGGGCGATTcctttttttcagcttttttctgTCCTCT
ACAAGGGAGATTCCCACAGTCCGGACCGAGCGTAATCTGGGGAGAAGCTA
TCCTCACCTGCGGACAGGCCCCGTAACAGATGAGTGTTGTTTCCCCCTAG
GGACCGCTTTTGTCCCTGTGATCTATACTGGTCACTCCACTTGTACATAT
TCGAAAAACGAAAACTTAGATATATTAGGgctctttattatttttttaaa
tgtaaatactACTTAGAGACTATTTTATGATTATATACTTTTATGATTAT
ATACCATAATgtttggtgataaaagagacgataaaaaaaacaatagttTC
ATGCGTCTCAAACAAATCTTTTTTGGGAATACGTTGATGAAGTGAAGTGT
AAAAGGATAGATAAAAAACttcttgaaaaaatcaattcacaCTTCTCTGA
TTGATATTTAAACTGAAttacaaaatactttttttcatCTAGTGTTTTTA
TCCCTTTATCTCCCATTGATTGCTTGATTGATTATATTGTATTTAAAAAG
ATTACTAATTGAATAAGATGTTTTGATAATGAAGATGTCCACTTCCTAGA
CATAAAAATTGATGGTACAACAACTGATATATATTACAAACCTACTCACA
CAGGCCAATACAGTGATTTTTCTAGTCAAACCCCATGGAACTTCAAAATT
TCTTGGGTTAAATCTTTGATTAATCGTG Run BLAST on NCBI transcript from alignment at sc0004144:4401..5528 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043353 ID=TCONS_00043353|Name=TCONS_00043353|organism=Clytia hemisphaerica|type=transcript|length=1128bp|location=Sequence derived from alignment at sc0004144:4401..5528 (Clytia hemisphaerica)
CACGATTAATCAAAGATTTAACCCAAGAAATTTTGAAGTTCCATGGGGTT
TGACTAGAAAAATCACTGTATTGGCCTGTGTGAGTAGGTTTGTAATATAT
ATCAGTTGTTGTACCATCAATTTTTATGTCTAGGAAGTGGACATCTTCAT
TATCAAAACATCTTATTCAATTAGTAATCTTTTTAAATACAATATAATCA
ATCAAGCAATCAATGGGAGATAAAGGGATAAAAACACTAGatgaaaaaaa
gtattttgtaaTTCAGTTTAAATATCAATCAGAGAAGtgtgaattgattt
tttcaagaaGTTTTTTATCTATCCTTTTACACTTCACTTCATCAACGTAT
TCCCAAAAAAGATTTGTTTGAGACGCATGAaactattgttttttttatcg
tctcttttatcaccaaacATTATGGTATATAATCATAAAAGTATATAATC
ATAAAATAGTCTCTAAGTagtatttacatttaaaaaaataataaagagcC
CTAATATATCTAAGTTTTCGTTTTTCGAATATGTACAAGTGGAGTGACCA
GTATAGATCACAGGGACAAAAGCGGTCCCTAGGGGGAAACAACACTCATC
TGTTACGGGGCCTGTCCGCAGGTGAGGATAGCTTCTCCCCAGATTACGCT
CGGTCCGGACTGTGGGAATCTCCCTTGTAGAGGAcagaaaaaagctgaaa
aaaaggAATCGCCCAAATGAATCAGGCTAAACGGAATGCGAACTAGAGCT
AAATAGAGAATCGCTAAAAAtgccacttttctagcggaaaaagaccagga
cttagGATAGTTAAAAatgagcttcggaaagttaCTTAGTGCAgtaatgg
gaatcttatacaaaactcACAATCAaagctacaatcaaggtcataatatt
tgagaaaaaagggaaattcaccgggaagttttgaaaccacaatcgagtAC
TTTTAAATATTAAACATTTCCTTCTTCAAGAACTTCCAAGGCTTCTTCTA
GAGGCACCGTTGAAGACTGGGTTGTTGAAGACTGGGTTGTTGAAGACTGG
GTTGTTGAAGACTGGGTTGTTGAAGATTCGTCACGGGGTGGCTTTTGCCC
TAACGATGGCTTGAATTCTTTGACTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043353-exon-sc0004144-1491911889:4401..5528 | TCONS_00043353-exon-sc0004144-1491911889:4401..5528 | Clytia hemisphaerica | exon |
| TCONS_00043353-exon-sc0004144-1510915933:4401..5528 | TCONS_00043353-exon-sc0004144-1510915933:4401..5528 | Clytia hemisphaerica | exon |
| TCONS_00043353-exon-sc0004144-1575043694:4401..5528 | TCONS_00043353-exon-sc0004144-1575043694:4401..5528 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004144 | supercontig | sc0004144:4401..5528 . |
Blast
The following BLAST results are available for this feature:
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