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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043354 ID=TCONS_00043354|Name=TCONS_00043354|organism=Clytia hemisphaerica|type=transcript|length=1242bp
CTTGTTTACAGGCTTCAGGCTGGCCATGGCCTCTCCCcttgtgatttctt
gtgtggtacaaaattatttaaagaaattaaatttgtcctgcctaaatgaa
aattttcgaacTTACCATACTAATGATTATAAAGacaattctttcttttt
gaattctTATCAACTGGCAGTTTGTTGTTACTGGATAAGAAAGCCAAGCT
AATTCTTCTGGGACATTGTTttataaaaactattttttgctttatatgga
taaaaaagttgattccATATGATAAttgttttcaacaaaaatgCATGTCA
TTAAAAAGTAACATTCTGATGATTTTAAAGTAAAGTAGGGGAAATAAAGT
GGTGAAAGTTCCTTTGGAATGATGGGATACAGTATCATATCATATTGTAA
GGATTAACCGTGTATTTATATTGTGGTAGAAAAGAGTACATTTGTGTTAT
ATTCTTGAACGTATTACTATTTATAATTAAATACCGTTGGCTAATCCTGT
TTTATTACTGTTCTTTAGATATTTTACACAATGTGAAAGGGTGGTTGGGT
GGACGAAACATAGTTGTATTCTGAAGAGTCAACTCAtgttttgaaatagt
ttttcaTGTTCAAACCCTGAAATGGAACTGTGCggcttttcttctttttc
cctCTCTTTTTTCAGGTTATTGGCAATATACTGGTACAATGAATTATCTT
GTGACTGTGGTTGATGATTTTATAACTGGAaagatttcttaatttttctg
aCAATAAAGTAAGTTTGTTTCATTATAAGTCTACTCTTGTTAAGTAGAAT
TGTGATCACTTAGACTTGAAGACAAATGAACAATTTGTTTTTAGGTTAGA
TCAGGATTCCTTGACTTGCTAATCCAGTAAACAGACTAAAGTAGCAGCCA
TAATATTATAATATTTATAATAttataatatttaaattttctttcttcag
aCAGACTTAGAGGAGACCAACGAAGATGATTGGACAGCTTGAATAGTTCT
AGataatttttgacatttcagCACTTAAGTAACAGATTTAGACTTTGGAA
AAGATTTTGAATCGCTTAGCTTTTTGTAAATATATACAGCGTAAAGTTTT
GATTTCGTATGTACATCatctgaccccgagaatgtagtaaacctcgagaa
tgtaggtttctcatttttaagcATTGTAGCCTTAACGATGGTTCAACTTC
ATGAAAATTTGTTTCAGGGCatactgttacatattacttatt Run BLAST on NCBI transcript from alignment at sc0004145:7004..8245 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043354 ID=TCONS_00043354|Name=TCONS_00043354|organism=Clytia hemisphaerica|type=transcript|length=1242bp|location=Sequence derived from alignment at sc0004145:7004..8245 (Clytia hemisphaerica)
aataagtaatatgtaacagtatGCCCTGAAACAAATTTTCATGAAGTTGA
ACCATCGTTAAGGCTACAATgcttaaaaatgagaaacctacattctcgag
gtttactacattctcggggtcagatGATGTACATACGAAATCAAAACTTT
ACGCTGTATATATTTACAAAAAGCTAAGCGATTCAAAATCTTTTCCAAAG
TCTAAATCTGTTACTTAAGTGctgaaatgtcaaaaattatCTAGAACTAT
TCAAGCTGTCCAATCATCTTCGTTGGTCTCCTCTAAGTCTGtctgaagaa
agaaaatttaaatattataaTATTATAAATATTATAATATTATGGCTGCT
ACTTTAGTCTGTTTACTGGATTAGCAAGTCAAGGAATCCTGATCTAACCT
AAAAACAAATTGTTCATTTGTCTTCAAGTCTAAGTGATCACAATTCTACT
TAACAAGAGTAGACTTATAATGAAACAAACTTACTTTATTGtcagaaaaa
ttaagaaatcttTCCAGTTATAAAATCATCAACCACAGTCACAAGATAAT
TCATTGTACCAGTATATTGCCAATAACCTGAAAAAAGAGagggaaaaaga
agaaaagccGCACAGTTCCATTTCAGGGTTTGAACAtgaaaaactatttc
aaaacaTGAGTTGACTCTTCAGAATACAACTATGTTTCGTCCACCCAACC
ACCCTTTCACATTGTGTAAAATATCTAAAGAACAGTAATAAAACAGGATT
AGCCAACGGTATTTAATTATAAATAGTAATACGTTCAAGAATATAACACA
AATGTACTCTTTTCTACCACAATATAAATACACGGTTAATCCTTACAATA
TGATATGATACTGTATCCCATCATTCCAAAGGAACTTTCACCACTTTATT
TCCCCTACTTTACTTTAAAATCATCAGAATGTTACTTTTTAATGACATGc
atttttgttgaaaacaaTTATCATATggaatcaacttttttatccatata
aagcaaaaaatagtttttataaAACAATGTCCCAGAAGAATTAGCTTGGC
TTTCTTATCCAGTAACAACAAACTGCCAGTTGATAagaattcaaaaagaa
agaattgtCTTTATAATCATTAGTATGGTAAgttcgaaaattttcattta
ggcaggacaaatttaatttctttaaataattttgtaccacacaagaaatc
acaagGGGAGAGGCCATGGCCAGCCTGAAGCCTGTAAACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043354-exon-sc0004145-1491911889:7004..8245 | TCONS_00043354-exon-sc0004145-1491911889:7004..8245 | Clytia hemisphaerica | exon |
| TCONS_00043354-exon-sc0004145-1510915933:7004..8245 | TCONS_00043354-exon-sc0004145-1510915933:7004..8245 | Clytia hemisphaerica | exon |
| TCONS_00043354-exon-sc0004145-1575043694:7004..8245 | TCONS_00043354-exon-sc0004145-1575043694:7004..8245 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004145 | supercontig | sc0004145:7004..8245 . |
Blast
The following BLAST results are available for this feature:
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