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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043360 ID=TCONS_00043360|Name=TCONS_00043360|organism=Clytia hemisphaerica|type=transcript|length=725bp
GAGATCTTCTTCTTTGCGAAAGGGataaaacaacatcaaaaggTGATGAG
CATACTTCTCTGGATATAAATGACGATTTGGTGTGTATGTTTGGAGAACT
TTTCTCACTTTACGACATCTCATACATTCTTTAGAATTCATTAGGGGAAT
TTTCTTAGGAAGCAGGTTTTCAACATGGTTTTCTTCAACAACAGTGTCAT
CAAGCACATTAGGCTGACTGTCATTTATAAGTTCTgcataatcaattttt
ttatcaagttCAAAGTTGCTGCAAAATTGTGCATAATATAAACTATCAAT
TTCTCTGTATTTTCCGTTTGAAAAAGTTCTATTGGGTCGATAAATATATC
TATCCAGtatgtttttcttgaaaacatcTTCACTATCCTCAGGAAGCTCA
GCTAATTCCTCCTCAGACTTGAACATATGAAAACGCTCCTCTGGTAAATT
AGTATTTACAAACATGACCTGAGGGTATCCTTTGCGCAACCAAAGTTCAG
GCATCAACTGATAGACAGCTTCTTGAACAGAACATTCTCTGTTATCACTG
TATGCTCGAGCTAACTTTTGCATTGTTTCAAACTTATCTTTTTCAAGTTC
TTTACACTCCGCTAAAGCCTCCTTCATTGCATCCGAGCTggaagtttcat
tttttgaaaagtatgcACACATATATTGCACTGCTTTGTAATGATTAAAG
ACTGGTTGGAGATCGATATTGGCTT Run BLAST on NCBI protein sequence of TCONS_00043360-protein >TCONS_00043360-protein ID=TCONS_00043360-protein|Name=TCONS_00043360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
ANIDLQPVFNHYKAVQYMCAYFSKNETSSSDAMKEALAECKELEKDKFET
MQKLARAYSDNRECSVQEAVYQLMPELWLRKGYPQVMFVNTNLPEERFHM
FKSEEELAELPEDSEDVFKKNILDRYIYRPNRTFSNGKYREIDSLYYAQF
CSNFELDKKIDYAELINDSQPNVLDDTVVEENHVENLLPKKIPLMNSKEC
MRCRKVRKVLQTYTPNRHLYPEKYAHHLLMLFYPFRKEEDL Run BLAST on NCBI transcript from alignment at sc0004152:7513..8237 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043360 ID=TCONS_00043360|Name=TCONS_00043360|organism=Clytia hemisphaerica|type=transcript|length=725bp|location=Sequence derived from alignment at sc0004152:7513..8237 (Clytia hemisphaerica)
AAGCCAATATCGATCTCCAACCAGTCTTTAATCATTACAAAGCAGTGCAA
TATATGTGTgcatacttttcaaaaaatgaaacttccAGCTCGGATGCAAT
GAAGGAGGCTTTAGCGGAGTGTAAAGAACTTGAAAAAGATAAGTTTGAAA
CAATGCAAAAGTTAGCTCGAGCATACAGTGATAACAGAGAATGTTCTGTT
CAAGAAGCTGTCTATCAGTTGATGCCTGAACTTTGGTTGCGCAAAGGATA
CCCTCAGGTCATGTTTGTAAATACTAATTTACCAGAGGAGCGTTTTCATA
TGTTCAAGTCTGAGGAGGAATTAGCTGAGCTTCCTGAGGATAGTGAAgat
gttttcaagaaaaacataCTGGATAGATATATTTATCGACCCAATAGAAC
TTTTTCAAACGGAAAATACAGAGAAATTGATAGTTTATATTATGCACAAT
TTTGCAGCAACTTTGaacttgataaaaaaattgattatgcAGAACTTATA
AATGACAGTCAGCCTAATGTGCTTGATGACACTGTTGTTGAAGAAAACCA
TGTTGAAAACCTGCTTCCTAAGAAAATTCCCCTAATGAATTCTAAAGAAT
GTATGAGATGTCGTAAAGTGAGAAAAGTTCTCCAAACATACACACCAAAT
CGTCATTTATATCCAGAGAAGTATGCTCATCAccttttgatgttgtttta
tCCCTTTCGCAAAGAAGAAGATCTC Coding sequence (CDS) from alignment at sc0004152:7513..8237 >TCONS_00043360 ID=TCONS_00043360|Name=TCONS_00043360|organism=Clytia hemisphaerica|type=CDS|length=723bp|location=Sequence derived from alignment at sc0004152:7513..8237 (Clytia hemisphaerica)
GCCAATATCGATCTCCAACCAGTCTTTAATCATTACAAAGCAGTGCAATA
TATGTGTgcatacttttcaaaaaatgaaacttccAGCTCGGATGCAATGA
AGGAGGCTTTAGCGGAGTGTAAAGAACTTGAAAAAGATAAGTTTGAAACA
ATGCAAAAGTTAGCTCGAGCATACAGTGATAACAGAGAATGTTCTGTTCA
AGAAGCTGTCTATCAGTTGATGCCTGAACTTTGGTTGCGCAAAGGATACC
CTCAGGTCATGTTTGTAAATACTAATTTACCAGAGGAGCGTTTTCATATG
TTCAAGTCTGAGGAGGAATTAGCTGAGCTTCCTGAGGATAGTGAAgatgt
tttcaagaaaaacataCTGGATAGATATATTTATCGACCCAATAGAACTT
TTTCAAACGGAAAATACAGAGAAATTGATAGTTTATATTATGCACAATTT
TGCAGCAACTTTGaacttgataaaaaaattgattatgcAGAACTTATAAA
TGACAGTCAGCCTAATGTGCTTGATGACACTGTTGTTGAAGAAAACCATG
TTGAAAACCTGCTTCCTAAGAAAATTCCCCTAATGAATTCTAAAGAATGT
ATGAGATGTCGTAAAGTGAGAAAAGTTCTCCAAACATACACACCAAATCG
TCATTTATATCCAGAGAAGTATGCTCATCAccttttgatgttgttttatC
CCTTTCGCAAAGAAGAAGATCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043360-exon-sc0004152-1491911889:7513..8237 | TCONS_00043360-exon-sc0004152-1491911889:7513..8237 | Clytia hemisphaerica | exon |
| TCONS_00043360-exon-sc0004152-1510915933:7513..8237 | TCONS_00043360-exon-sc0004152-1510915933:7513..8237 | Clytia hemisphaerica | exon |
| TCONS_00043360-exon-sc0004152-1575043694:7513..8237 | TCONS_00043360-exon-sc0004152-1575043694:7513..8237 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004152 | supercontig | sc0004152:7513..8237 . |
Blast
The following BLAST results are available for this feature:
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