TCONS_00043375 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043375
Unique NameTCONS_00043375
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1523

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043375 ID=TCONS_00043375|Name=TCONS_00043375|organism=Clytia hemisphaerica|type=transcript|length=1523bp
tttggttattttgagGTTGATGATGTGATTGAGTTGGTTTTGATTTGTAA
AGATGTTAGAGAAATGGTTGGAAGAACTTCCTCCCTCTGAAAAGAAGCTA
GAAGAAGAATCTGAGAACGTGATTGTCCAAAAGATCTTCATCCATAAACA
TAAGCTAGAAGAAGGAATCAATTTTGCCAAAGAAGATCTGGAGAAATCTG
GTGGTGTTGAAATGCATATTCCCAAAGAAGCTATCCCTGGAAACGGTACG
GCCGATTCCATTTATTTTGTGTACTACAAAAAGAACAAATTCTTTAACGG
TAACAAACGTTTGGAAGAGCTGTGCATCAACGGTTTTACGGTCTTCAAAG
AACGAGTTTTCACACCGGTCGTATCCGGGGAAGTGGTCGGACAAACAACC
CGGAACTTGAGTGCACCTGTTGTCTTGAAGTTCCGGCATACCGAAGATGA
GGCCAAACTTCGCAAGACAGCATGTGCTTATTGGGATTACGAAGCAGACA
ATGAGAAAGGAGGGTGGAGTACAGAAGGCTGTACGGTGGAGAGCATAGCC
AATCAAACCATCACGTGTCATTGTAACCATCTGACCAACTTTGCTGCCAT
GATGGACGTGTACGCAGAGACAAGTACAATTTGCGGCAAACATCGCAAGA
TTATCTCCTTCATAACGGTGATAGGGTGTTTCTTGTCGCTCATTGGTCTT
TTCCTGACATTCTTGACGTACTTCATGTTCAGGAGATTACTGAAAGAGAT
GGCAGCCAAGGTCTTAATCCAACTCTGTGTTGCTTTATTCATTGTGGTTT
TAACATTTGTAACTGGTATAGAACAGACAGATAAACCAGTAATGTGTATG
ACCGTTGCATTTGTTCTTCATTACTTCACGCTGGTATCATTTTTCTGGAT
GTTGATGGAGGCGTCTTTCATGTATCACGCCTTTGTTAGGGTGTGGCCGC
CACGACAGGGCGGAGATATATACAAGTCAACTGTTGTAGCTTGGGGGATC
CCCTTGTTCATTGTGGGAATCACCTTTTTGACAAGCATGGATAATTATGG
TGGCTCGCACTACTGTCACCTGACAGGCACCCCATTGATTGCTTCATATT
TGGCGCCCATCGGTCTCATCATCCTCATCAATTTCGTCATCTTCATATTC
ATCATGATGAAGCTGGACGGCCGCCCCAATGGAAACACAGATCAAAACAG
TTTGCAACTCGCAACCGCCCGTCTAAGACGCGCGTTTGGTATCATGATCC
TGATGGGCTTGACGTGGGCGTTTGGTTTTGGTCAGCTGACGGACGCGCGC
TTGGAATTCTCTTACTTGTTTTCAGTTTTCAACGCGTCTCAAGGGTTTTC
CATCTTCATTTTCTACGTCACAGCCCAGAAACGTGCGCGCTCTCAATGGA
TCGCTTTCTTCAAGTGTGACGGCCGCTCAGAGAACAAGCGCACGACTGAT
TCGTATTTTTCGGAACGACGCAGAATAAATACCATGCAGTTTAACAGGCT
CGGATCGAGTGCTTCAAGTGTAA
Run BLAST on NCBI

protein sequence of TCONS_00043375-protein

>TCONS_00043375-protein ID=TCONS_00043375-protein|Name=TCONS_00043375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MLEKWLEELPPSEKKLEEESENVIVQKIFIHKHKLEEGINFAKEDLEKSG
GVEMHIPKEAIPGNGTADSIYFVYYKKNKFFNGNKRLEELCINGFTVFKE
RVFTPVVSGEVVGQTTRNLSAPVVLKFRHTEDEAKLRKTACAYWDYEADN
EKGGWSTEGCTVESIANQTITCHCNHLTNFAAMMDVYAETSTICGKHRKI
ISFITVIGCFLSLIGLFLTFLTYFMFRRLLKEMAAKVLIQLCVALFIVVL
TFVTGIEQTDKPVMCMTVAFVLHYFTLVSFFWMLMEASFMYHAFVRVWPP
RQGGDIYKSTVVAWGIPLFIVGITFLTSMDNYGGSHYCHLTGTPLIASYL
APIGLIILINFVIFIFIMMKLDGRPNGNTDQNSLQLATARLRRAFGIMIL
MGLTWAFGFGQLTDARLEFSYLFSVFNASQGFSIFIFYVTAQKRARSQWI
AFFKCDGRSENKRTTDSYFSERRRINTMQFNRLGSSASSV
Run BLAST on NCBI

transcript from alignment at sc0004169:17..7546+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043375 ID=TCONS_00043375|Name=TCONS_00043375|organism=Clytia hemisphaerica|type=transcript|length=7530bp|location=Sequence derived from alignment at sc0004169:17..7546+ (Clytia hemisphaerica)
tttggttattttgagGTTGATGATGTGATTGAGTTGGTTTTGGTGAgctt
attttagtaaaaaatactGAGATTTTATGTATAGATAAAATTTGGCCACG
TGAAATCTGATTTGACCAAGGACTTAAAATTTCTTATCCACTGAACTCTT
TTTACCAATTCCAGAATATTCTAGTCATTTTCTAacggaaacacccaaaa
aaagCTAGAATTTGACGACTGCTTGTTACttagaattcatgatatgcacc
attggttggaagtgacgtattgactgattttacgtcacttacaaccaatc
agctgttgggtccgtgatgtaatgtcaaaagacattgtaatggtgcatat
catgaatagaagcACAGTGGTCAAAACCTGCATTTTTGGATACTTCCAAT
AGAGAGTATAACGTCATCTTgtcttacgcatatcaagaattacgAATAAC
TTGATTAAAGGATTAGTCTAACAAGCtggacgactaattcagacatagta
gaaataaagcaaaaagtaacggagggaacaattttatacaaactGAATCC
CCTAACAATAatcatattatcatataacacctatactactgtattacacg
cattataaacgactccagtctattaAAGAATAGACAATACTACCAGATAG
AAAGAAATCTCAAATCAcagtttttcaatattttctccaTAGATTTGTAA
AGATGTTAGAGAAATGGTTGGAAGAACTTCCTCCCTCTGAAAAGAAGCTA
GAAGAAGAATCTGAGAACGTGATTGTCCAAAAGATCTTCATCCATAAACA
TAAGCTAGAAGAAGGAATCAATTTTGCCAAAGAAGATCTGGAGAAATCTG
GTGGTGTTGAAATGCATATTCCCAAAGAAGTAAGCTTTCAATACATTTTT
AATGACATTCTGCGAATTCTCGAGTGATCAGTATAACTTAATCAGAAAAT
TCTTTTCGGTTCAATTTGGTGATTAAGGTCCCCTGATTGGTCGATACTTT
TCAAGAGGGATtttgttctcaacttcagttgagttagaatctgagaatgt
gtgtgtgtgtgtctgtctgtctgtgtgtgtgtatgtcccaaagctttggg
gcagcctggagacttcaaaaattgttcgatttggctgaaatttggcacac
ttgttccttgggtgaatatctggNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNATGTCCCAaagctttggggcagcctgga
gacttcaaaaattgttcgatttggctgaaatttggcacacttgttccttg
ggtgaatatctggtggtttttttttaatttttcaaaatttttgatttttg
gggcctggggacgagttttcgccaaaacgaggctaaaactttggggcagc
ctggagacttcaaaaattgttcgatttgNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTagaactttggggcagcctggagac
ttcaaaaattgttcgatttggctgaaattttgcacacttgttccttgggt
gaatatctgggggtgtttttttcatttttctaaaattttgatttttgggg
cctggggacgagtttttcgccaaaacgaggctaaagttttggggcagcct
ggagactttaaaaattgttcgatctggctgaaattttgcacacttatgTT
CCTTGGGGGAATATCtggtggtgttttttttcattttttgaaaattttga
tttttggggcctgtggacgagtttttcgccaaaacgaggctaaaactttg
gggcagcctggagacttcaaaaattgttcgatttggctaaaattttgcac
acttgttccttgggtgaatatctgggggtactttttgcatttttcaaaaa
tttagattttcggggcctggggacgagttttttgccaaaacgaggctaaa
gctttgaagcagcatacaggcctccaaaatggtcggatttggttgaaatt
tggcacacttgttcattgggtaaatatctgggggtctacaattgggccta
tgaataatttgaagccactgaagttgagcccagtgcgttgcgcacgttcg
actatcaTGAATTCGGGTTGAGATTCAACTTAAAGAATATTACTAGTCTA
ACCAAAATGCACAAAATGCACAAATAGtcgataaaatttaaatttatctg
CAATTTCCTTCATTAGGCTATCCCTGGAAACGGTACGGCCGATTCCATTT
ATTTTGTGTACTACAAAAAGAACAAATTCTTTAACGGTAACAAACGTTTG
GAAGAGCTGTGCATCAACGGTTTTACGGTCTTCAAAGAACGAGTTTTCAC
ACCGGTCGTATCCGGGGAAGTGGTCGGACAAACAACCCGGAACTTGAGTG
CACCTGTTGTCTTGAAGTTCCGGCATACCGAAGATGTGAGTTTTTACCGC
TATGTCTTtccaacgttttttcaacgtttgtctggtgtcccagaaaaaaa
tcCTCCTCTTTGAAGTGAACTTTCTCGAGTTCTATCAACTGTTAAAGATT
AAAGAATCAATCATTTTGCATTTGAAAGAgaaaggataaacttaaatttt
ttttaaaatttgtcaaatttggtccactagatcaaaagttatgatctaaa
tgctaaaacattacttttcaaaaaatttgaaaaaaggcgaaaaacCCTGC
ATGCACTTTCTGGGACACCTGGTAGAACGTTTGCGACGTctatttaacgt
tagatgaatgttgaaacaatcTTATGTACCAGAAGGGTGTCTATAGGCTT
TTACTTCTTCAATATTAGCATGAAAAATGGATCGGACATTTGGCTAAAAT
TCGTGTTTGTATGATATTCAGTTCTAAAAAGAGCAATTTTAGATCATCTG
TTCTAATTTTCTAAATACGATCACTCCTTCATACCTAACATAGATAAAAC
CCCTCCTCATCCTGgttgaattaattaaaaataaaaaatttttccctTCC
TTTTGAATAACTAGACATGTTTCTAAACCAAGGGTTTTATTTAGACCCGG
CGAACGGCGAATTCGCCAGTCTAAGgcacaaaaaaaattacaatttacCA
TTCGAAAATTTCGGTTCgccgcctcaagtacatatttacgCCAATCAAGA
ATTCGCCGGCTTAGAATCTAGAAATCgccagagttaatttttcattcgcc
agccATAACCCCTGCTAAACTGTTGTTTCCTCAATTTCAGGAGGCCAAAC
TTCGCAAGACAGCATGTGCTTATTGGGATTACGAAGCAGACAATGAGAAA
GGAGGGTGGAGTACAGAAGGCTGTACGGTGGAGAGCATAGCCAATCAAAC
CATCACGTGTCATTGTAACCATCTGACCAACTTTGCTGCCATGATGGTAA
GTTCTTACTAATTAGAATAtatcttttcgaccgtagtcgccaATTGCCgc
accaccctaaactcgatccaatcctttttttacaattttttctattgtct
ttaagtgggaaaaaagactgggacggttttagggtggtaaaacgaacaaa
aaaaatgcctgcgttgcaattggcggctacagtcgaaaaggtgtatttcc
aAATAGTTGGTCACTAAGCGCTCTACTTATTTATGTTAGCTCGGGGTAaa
aataatacattttttatcattcaatCTGACAAAATTATAACTAGTTTGTA
TTGATGACACTCCTAAACGTGCCCTTTGTTTGTGCTCATAAAGATTATCT
CTTCAATGTTTACAGGACGTGTACGCAGAGACAAGTACAATTTGCGGCAA
ACATCGCAAGATTATCTCCTTCATAACGGTGATAGGGTGTTTCTTGTCGC
TCATTGGTCTTTTCCTGACATTCTTGACGTACTTCATGTTCAGGTAAGTT
TTCTTTACGGTATCGATTTTGTCTGGACTGAGAACGCGTTTTGGTTTCAA
GTGTGGACTAAGACAATCTtccatagtgactaaggaggttTGGTTTGCGT
CGGCCGGAGAAAATATCGATTTTGAAACTACGGTATGTCTCAAAATGACC
CTATTTTGActgaatttcttcaaaaacaagGATGTTCAGAGTCTGATGTA
TTAAAAAGGATAAAGAGGATAAATGATCCGTTATCCCTACTTCCATTTGA
GGATATTGCAATTACTGCTTctactcaggggggggggggNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATACCTCTTcaaagagtctg
ggtggtggtatgtaaaaattcgtaaaaatccttttactactcatatatgt
ctgagattttactatcgaccccccccccttctgtTCTACTAAGCTTTTTG
AACCTTTCCGGGCGATAATTCAGCTCGTGGGCCGCTATAAATTCTAATAT
CAGGGCAAAAGAGCAATTCTCAATTGCAAAGTTTTGCAGGTCATTGGCCG
GTAATTCAGGGCTTGGGCcgcttacggaaaaaaaattgcagTGGTATAAA
AAATCGCAGCTAAATAATATAAGGAGCATAGACCCGTTAAAGGATACCAG
CCAGACTATCAAAACACTTGATTTTTTCTATCATCGCAGGAGATTACTGA
AAGAGATGGCAGCCAAGGTCTTAATCCAACTCTGTGTTGCTTTATTCATT
GTGGTTTTAACATTTGTAACTGGTATAGAACAGACAGATAAACCAGTAAT
GTGTATGACCGTTGCATTTGTTCTTCATTACTTCACGCTGGTATCATTTT
TCTGGATGTTGATGGAGGCGTCTTTCATGTATCACGCCTTTGTTAGGGTG
TGGCCGCCACGACAGGGCGGAGATATATACAAGTCAACTGTTGTAGCTTG
GGGTAAGTTTATGTTCTACGCGCTTTATTAAAAATGCTAACAGCAAAAAG
ATGTATTGTATTTTATTCAAGAATCCAGGGCAAAACTCAACTGAATAAAA
GAGACCGTCCTAAGGCATGATATTTCTTTACctttaatcaaaaataaatt
tctttcaaaatacacgttttttttaagaaactagttttaccaagcagcct
caacgtttcttaagaaatcggccttttgagccttaaatgtttctttacat
gtttctaaaatttttgacataatcagcttatttttcatgcaaagaaaaaa
aacattcgttTTGATttgaaggttcttaaaaaaaccgaattaaaaaacgt
tattttctcattctcagcctcggcatgtttcttagatgtttcttagtttt
taggcattctgagcctcatgtttcttaaaagtgtttcttaaaaaaaaaac
gtgtaggcagtaaatctatttattttcttccttttttgcTCTAGGGATCC
CCTTGTTCATTGTGGGAATCACCTTTTTGACAAGCATGGATAATTATGGT
GGCTCGCACTAGTAAGTATCTTCATCTATATAGGCCTTTTCATATATTAT
TTTGAGTGGAACAACtttctcgttttgaaaccattgccaaggtgattaaa
tcGAAGCCTTCAAATGTTACTTTTATAAATAAAGTAGAATAAAGTATGAG
CTCTTCTGGGAAATCAATTATCatagtaatattttgaaaacgaggtaatc
GTTGATGGTGACGTAATTGATGAAAAAGTCTATTTATTACcaataaaaag
ttaattttgtCTCGATGATATTACCAGGTGATTTATCATGTACAATGGAT
GGGGAAACTAAACTTAGAGTTTAACCAAATCTTTGctaattttaaaaaaa
tgttggtttgccgttACCCGATCCTAGgtctttgttgtttttgttttcat
ttatgaATGCGTCAATAATCTATTCCGTTGTTTGGGAGTAgagaaaatga
tattttcaaagacaaaaagTTATTCATGATAGCAATAAGTTATTTTTGGA
TCGGTAGGATTTGGGTAAGGGAGAGTCAATTTTACAGACACTTTTATGAA
AATATCTCTTATTTTTTAGCTGTCACCTGACAGGCACCCCATTGATTGCT
TCATATTTGGCGCCCATCGGTCTCATCATCCTCATCAATTTCGTCATCTT
CATATTCATCATGATGAAGCTGGACGGCCGCCCCAATGGAAACACAGATC
AAAACAGTTTGCAACTCGCAACCGCCCGTCTAAGACGCGCGTTTGGTATC
ATGATCCTGATGGGCTTGACGTGGGCGTTTGGTTTTGGTCAGCTGACGGA
CGCGCGCTTGGAATTCTCTTACTTGTTTTCAGTTTTCAACGCGTCTCAAG
GGTTTTCCATCTTCATTTTCTACGTCACAGCCCAGAAACGTGCGCGCTCT
CAATGGATCGCTTTCTTCAAGTGTGACGGCCGCTCAGAGAACAAGCGCAC
GACTGATTCGTATTTTTCGGAACGACGCAGAATAAATACCATGCAGTTTA
ACAGGCTCGGATCGAGTGCTTCAAGTGTAA

Coding sequence (CDS) from alignment at sc0004169:17..7546+

>TCONS_00043375 ID=TCONS_00043375|Name=TCONS_00043375|organism=Clytia hemisphaerica|type=CDS|length=10290bp|location=Sequence derived from alignment at sc0004169:17..7546+ (Clytia hemisphaerica)
ATGTTAGAGAAATGGTTGGAAGAACTTCCTCCCTCTGAAAAGAAGCTAGA
AGAAGAATCTGAGAACGTGATTGTCCAAAAGATCTTCATCCATAAACATA
AGCTAGAAGAAGGAATCAATTTTGCCAAAGAAGATCTGGAGAAATCTGGT
GGTGTTGAAATGCATATTCCCAAAGAAGCTATCCCTGGAAACGGTACGGC
CGATTCCATTTATTTTGTGTACTACAAAAAGAACAAATTCTTTAACGGTA
ACAAACGTTTGGAAGAGCTGTGCATCAACGGTTTTACGGTCTTCAAAGAA
CGAGTTTTCACACCGGTCGTATCCGGGGAAGTGGTCGGACAAACAACCCG
GAACTTGAGTGCACCTGTTGTCTTGAAGTTCCGGCATACCGAAGATGAGG
CCAAACTTCGCAAGACAGCATGTGCTTATTGGGATTACGAAGCAGACAAT
GAGAAAGGAGGGTGGAGTACAGAAGGCTGTACGGTGGAGAGCATAGCCAA
TCAAACCATCACGTGTCATTGTAACCATCTGACCAACTTTGCTGCCATGA
TGGACGTGTACGCAGAGACAAGTACAATTTGCGGCAAACATCGCAAGATT
ATCTCCTTCATAACGGTGATAGGGTGTTTCTTGTCGCTCATTGGTCTTTT
CCTGACATTCTTGACGTACTTCATGTTCAGGAGATTACTGAAAGAGATGG
CAGCCAAGGTCTTAATCCAACTCTGTGTTGCTTTATTCATTGTGGTTTTA
ACATTTGTAACTGGTATAGAACAGACAGATAAACCAGTAATGTGTATGAC
CGTTGCATTTGTTCTTCATTACTTCACGCTGGTATCATTTTTCTGGATGT
TGATGGAGGCGTCTTTCATGTATCACGCCTTTGTTAGGGTGTGGCCGCCA
CGACAGGGCGGAGATATATACAAGTCAACTGTTGTAGCTTGGGGGATCCC
CTTGTTCATTGTGGGAATCACCTTTTTGACAAGCATGGATAATTATGGTG
GCTCGCACTACTGTCACCTGACAGGCACCCCATTGATTGCTTCATATTTG
GCGCCCATCGGTCTCATCATCCTCATCAATTTCGTCATCTTCATATTCAT
CATGATGAAGCTGGACGGCCGCCCCAATGGAAACACAGATCAAAACAGTT
TGCAACTCGCAACCGCCCGTCTAAGACGCGCGTTTGGTATCATGATCCTG
ATGGGCTTGACGTGGGCGTTTGGTTTTGGTCAGCTGACGGACGCGCGCTT
GGAATTCTCTTACTTGTTTTCAGTTTTCAACGCGTCTCAAGGGTTTTCCA
TCTTCATTTTCTACGTCACAGCCCAGAAACGTGCGCGCTCTCAATGGATC
GCTTTCTTCAAGTGTGACGGCCGCTCAGAGAACAAGCGCACGACTGATTC
GTATTTTTCGGAACGACGCAGAATAAATACCATGCAGTTTAACAGGCTCG
GATCGAGTGCTTCAAGTGTAATGTTAGAGAAATGGTTGGAAGAACTTCCT
CCCTCTGAAAAGAAGCTAGAAGAAGAATCTGAGAACGTGATTGTCCAAAA
GATCTTCATCCATAAACATAAGCTAGAAGAAGGAATCAATTTTGCCAAAG
AAGATCTGGAGAAATCTGGTGGTGTTGAAATGCATATTCCCAAAGAAGCT
ATCCCTGGAAACGGTACGGCCGATTCCATTTATTTTGTGTACTACAAAAA
GAACAAATTCTTTAACGGTAACAAACGTTTGGAAGAGCTGTGCATCAACG
GTTTTACGGTCTTCAAAGAACGAGTTTTCACACCGGTCGTATCCGGGGAA
GTGGTCGGACAAACAACCCGGAACTTGAGTGCACCTGTTGTCTTGAAGTT
CCGGCATACCGAAGATGAGGCCAAACTTCGCAAGACAGCATGTGCTTATT
GGGATTACGAAGCAGACAATGAGAAAGGAGGGTGGAGTACAGAAGGCTGT
ACGGTGGAGAGCATAGCCAATCAAACCATCACGTGTCATTGTAACCATCT
GACCAACTTTGCTGCCATGATGGACGTGTACGCAGAGACAAGTACAATTT
GCGGCAAACATCGCAAGATTATCTCCTTCATAACGGTGATAGGGTGTTTC
TTGTCGCTCATTGGTCTTTTCCTGACATTCTTGACGTACTTCATGTTCAG
GAGATTACTGAAAGAGATGGCAGCCAAGGTCTTAATCCAACTCTGTGTTG
CTTTATTCATTGTGGTTTTAACATTTGTAACTGGTATAGAACAGACAGAT
AAACCAGTAATGTGTATGACCGTTGCATTTGTTCTTCATTACTTCACGCT
GGTATCATTTTTCTGGATGTTGATGGAGGCGTCTTTCATGTATCACGCCT
TTGTTAGGGTGTGGCCGCCACGACAGGGCGGAGATATATACAAGTCAACT
GTTGTAGCTTGGGGGATCCCCTTGTTCATTGTGGGAATCACCTTTTTGAC
AAGCATGGATAATTATGGTGGCTCGCACTACTGTCACCTGACAGGCACCC
CATTGATTGCTTCATATTTGGCGCCCATCGGTCTCATCATCCTCATCAAT
TTCGTCATCTTCATATTCATCATGATGAAGCTGGACGGCCGCCCCAATGG
AAACACAGATCAAAACAGTTTGCAACTCGCAACCGCCCGTCTAAGACGCG
CGTTTGGTATCATGATCCTGATGGGCTTGACGTGGGCGTTTGGTTTTGGT
CAGCTGACGGACGCGCGCTTGGAATTCTCTTACTTGTTTTCAGTTTTCAA
CGCGTCTCAAGGGTTTTCCATCTTCATTTTCTACGTCACAGCCCAGAAAC
GTGCGCGCTCTCAATGGATCGCTTTCTTCAAGTGTGACGGCCGCTCAGAG
AACAAGCGCACGACTGATTCGTATTTTTCGGAACGACGCAGAATAAATAC
CATGCAGTTTAACAGGCTCGGATCGAGTGCTTCAAGTGTAATGTTAGAGA
AATGGTTGGAAGAACTTCCTCCCTCTGAAAAGAAGCTAGAAGAAGAATCT
GAGAACGTGATTGTCCAAAAGATCTTCATCCATAAACATAAGCTAGAAGA
AGGAATCAATTTTGCCAAAGAAGATCTGGAGAAATCTGGTGGTGTTGAAA
TGCATATTCCCAAAGAAGCTATCCCTGGAAACGGTACGGCCGATTCCATT
TATTTTGTGTACTACAAAAAGAACAAATTCTTTAACGGTAACAAACGTTT
GGAAGAGCTGTGCATCAACGGTTTTACGGTCTTCAAAGAACGAGTTTTCA
CACCGGTCGTATCCGGGGAAGTGGTCGGACAAACAACCCGGAACTTGAGT
GCACCTGTTGTCTTGAAGTTCCGGCATACCGAAGATGAGGCCAAACTTCG
CAAGACAGCATGTGCTTATTGGGATTACGAAGCAGACAATGAGAAAGGAG
GGTGGAGTACAGAAGGCTGTACGGTGGAGAGCATAGCCAATCAAACCATC
ACGTGTCATTGTAACCATCTGACCAACTTTGCTGCCATGATGGACGTGTA
CGCAGAGACAAGTACAATTTGCGGCAAACATCGCAAGATTATCTCCTTCA
TAACGGTGATAGGGTGTTTCTTGTCGCTCATTGGTCTTTTCCTGACATTC
TTGACGTACTTCATGTTCAGGAGATTACTGAAAGAGATGGCAGCCAAGGT
CTTAATCCAACTCTGTGTTGCTTTATTCATTGTGGTTTTAACATTTGTAA
CTGGTATAGAACAGACAGATAAACCAGTAATGTGTATGACCGTTGCATTT
GTTCTTCATTACTTCACGCTGGTATCATTTTTCTGGATGTTGATGGAGGC
GTCTTTCATGTATCACGCCTTTGTTAGGGTGTGGCCGCCACGACAGGGCG
GAGATATATACAAGTCAACTGTTGTAGCTTGGGGGATCCCCTTGTTCATT
GTGGGAATCACCTTTTTGACAAGCATGGATAATTATGGTGGCTCGCACTA
CTGTCACCTGACAGGCACCCCATTGATTGCTTCATATTTGGCGCCCATCG
GTCTCATCATCCTCATCAATTTCGTCATCTTCATATTCATCATGATGAAG
CTGGACGGCCGCCCCAATGGAAACACAGATCAAAACAGTTTGCAACTCGC
AACCGCCCGTCTAAGACGCGCGTTTGGTATCATGATCCTGATGGGCTTGA
CGTGGGCGTTTGGTTTTGGTCAGCTGACGGACGCGCGCTTGGAATTCTCT
TACTTGTTTTCAGTTTTCAACGCGTCTCAAGGGTTTTCCATCTTCATTTT
CTACGTCACAGCCCAGAAACGTGCGCGCTCTCAATGGATCGCTTTCTTCA
AGTGTGACGGCCGCTCAGAGAACAAGCGCACGACTGATTCGTATTTTTCG
GAACGACGCAGAATAAATACCATGCAGTTTAACAGGCTCGGATCGAGTGC
TTCAAGTGTAATGTTAGAGAAATGGTTGGAAGAACTTCCTCCCTCTGAAA
AGAAGCTAGAAGAAGAATCTGAGAACGTGATTGTCCAAAAGATCTTCATC
CATAAACATAAGCTAGAAGAAGGAATCAATTTTGCCAAAGAAGATCTGGA
GAAATCTGGTGGTGTTGAAATGCATATTCCCAAAGAAGCTATCCCTGGAA
ACGGTACGGCCGATTCCATTTATTTTGTGTACTACAAAAAGAACAAATTC
TTTAACGGTAACAAACGTTTGGAAGAGCTGTGCATCAACGGTTTTACGGT
CTTCAAAGAACGAGTTTTCACACCGGTCGTATCCGGGGAAGTGGTCGGAC
AAACAACCCGGAACTTGAGTGCACCTGTTGTCTTGAAGTTCCGGCATACC
GAAGATGAGGCCAAACTTCGCAAGACAGCATGTGCTTATTGGGATTACGA
AGCAGACAATGAGAAAGGAGGGTGGAGTACAGAAGGCTGTACGGTGGAGA
GCATAGCCAATCAAACCATCACGTGTCATTGTAACCATCTGACCAACTTT
GCTGCCATGATGGACGTGTACGCAGAGACAAGTACAATTTGCGGCAAACA
TCGCAAGATTATCTCCTTCATAACGGTGATAGGGTGTTTCTTGTCGCTCA
TTGGTCTTTTCCTGACATTCTTGACGTACTTCATGTTCAGGAGATTACTG
AAAGAGATGGCAGCCAAGGTCTTAATCCAACTCTGTGTTGCTTTATTCAT
TGTGGTTTTAACATTTGTAACTGGTATAGAACAGACAGATAAACCAGTAA
TGTGTATGACCGTTGCATTTGTTCTTCATTACTTCACGCTGGTATCATTT
TTCTGGATGTTGATGGAGGCGTCTTTCATGTATCACGCCTTTGTTAGGGT
GTGGCCGCCACGACAGGGCGGAGATATATACAAGTCAACTGTTGTAGCTT
GGGGGATCCCCTTGTTCATTGTGGGAATCACCTTTTTGACAAGCATGGAT
AATTATGGTGGCTCGCACTACTGTCACCTGACAGGCACCCCATTGATTGC
TTCATATTTGGCGCCCATCGGTCTCATCATCCTCATCAATTTCGTCATCT
TCATATTCATCATGATGAAGCTGGACGGCCGCCCCAATGGAAACACAGAT
CAAAACAGTTTGCAACTCGCAACCGCCCGTCTAAGACGCGCGTTTGGTAT
CATGATCCTGATGGGCTTGACGTGGGCGTTTGGTTTTGGTCAGCTGACGG
ACGCGCGCTTGGAATTCTCTTACTTGTTTTCAGTTTTCAACGCGTCTCAA
GGGTTTTCCATCTTCATTTTCTACGTCACAGCCCAGAAACGTGCGCGCTC
TCAATGGATCGCTTTCTTCAAGTGTGACGGCCGCTCAGAGAACAAGCGCA
CGACTGATTCGTATTTTTCGGAACGACGCAGAATAAATACCATGCAGTTT
AACAGGCTCGGATCGAGTGCTTCAAGTGTAATGTTAGAGAAATGGTTGGA
AGAACTTCCTCCCTCTGAAAAGAAGCTAGAAGAAGAATCTGAGAACGTGA
TTGTCCAAAAGATCTTCATCCATAAACATAAGCTAGAAGAAGGAATCAAT
TTTGCCAAAGAAGATCTGGAGAAATCTGGTGGTGTTGAAATGCATATTCC
CAAAGAAGCTATCCCTGGAAACGGTACGGCCGATTCCATTTATTTTGTGT
ACTACAAAAAGAACAAATTCTTTAACGGTAACAAACGTTTGGAAGAGCTG
TGCATCAACGGTTTTACGGTCTTCAAAGAACGAGTTTTCACACCGGTCGT
ATCCGGGGAAGTGGTCGGACAAACAACCCGGAACTTGAGTGCACCTGTTG
TCTTGAAGTTCCGGCATACCGAAGATGAGGCCAAACTTCGCAAGACAGCA
TGTGCTTATTGGGATTACGAAGCAGACAATGAGAAAGGAGGGTGGAGTAC
AGAAGGCTGTACGGTGGAGAGCATAGCCAATCAAACCATCACGTGTCATT
GTAACCATCTGACCAACTTTGCTGCCATGATGGACGTGTACGCAGAGACA
AGTACAATTTGCGGCAAACATCGCAAGATTATCTCCTTCATAACGGTGAT
AGGGTGTTTCTTGTCGCTCATTGGTCTTTTCCTGACATTCTTGACGTACT
TCATGTTCAGGAGATTACTGAAAGAGATGGCAGCCAAGGTCTTAATCCAA
CTCTGTGTTGCTTTATTCATTGTGGTTTTAACATTTGTAACTGGTATAGA
ACAGACAGATAAACCAGTAATGTGTATGACCGTTGCATTTGTTCTTCATT
ACTTCACGCTGGTATCATTTTTCTGGATGTTGATGGAGGCGTCTTTCATG
TATCACGCCTTTGTTAGGGTGTGGCCGCCACGACAGGGCGGAGATATATA
CAAGTCAACTGTTGTAGCTTGGGGGATCCCCTTGTTCATTGTGGGAATCA
CCTTTTTGACAAGCATGGATAATTATGGTGGCTCGCACTACTGTCACCTG
ACAGGCACCCCATTGATTGCTTCATATTTGGCGCCCATCGGTCTCATCAT
CCTCATCAATTTCGTCATCTTCATATTCATCATGATGAAGCTGGACGGCC
GCCCCAATGGAAACACAGATCAAAACAGTTTGCAACTCGCAACCGCCCGT
CTAAGACGCGCGTTTGGTATCATGATCCTGATGGGCTTGACGTGGGCGTT
TGGTTTTGGTCAGCTGACGGACGCGCGCTTGGAATTCTCTTACTTGTTTT
CAGTTTTCAACGCGTCTCAAGGGTTTTCCATCTTCATTTTCTACGTCACA
GCCCAGAAACGTGCGCGCTCTCAATGGATCGCTTTCTTCAAGTGTGACGG
CCGCTCAGAGAACAAGCGCACGACTGATTCGTATTTTTCGGAACGACGCA
GAATAAATACCATGCAGTTTAACAGGCTCGGATCGAGTGCTTCAAGTGTA
ATGTTAGAGAAATGGTTGGAAGAACTTCCTCCCTCTGAAAAGAAGCTAGA
AGAAGAATCTGAGAACGTGATTGTCCAAAAGATCTTCATCCATAAACATA
AGCTAGAAGAAGGAATCAATTTTGCCAAAGAAGATCTGGAGAAATCTGGT
GGTGTTGAAATGCATATTCCCAAAGAAGCTATCCCTGGAAACGGTACGGC
CGATTCCATTTATTTTGTGTACTACAAAAAGAACAAATTCTTTAACGGTA
ACAAACGTTTGGAAGAGCTGTGCATCAACGGTTTTACGGTCTTCAAAGAA
CGAGTTTTCACACCGGTCGTATCCGGGGAAGTGGTCGGACAAACAACCCG
GAACTTGAGTGCACCTGTTGTCTTGAAGTTCCGGCATACCGAAGATGAGG
CCAAACTTCGCAAGACAGCATGTGCTTATTGGGATTACGAAGCAGACAAT
GAGAAAGGAGGGTGGAGTACAGAAGGCTGTACGGTGGAGAGCATAGCCAA
TCAAACCATCACGTGTCATTGTAACCATCTGACCAACTTTGCTGCCATGA
TGGACGTGTACGCAGAGACAAGTACAATTTGCGGCAAACATCGCAAGATT
ATCTCCTTCATAACGGTGATAGGGTGTTTCTTGTCGCTCATTGGTCTTTT
CCTGACATTCTTGACGTACTTCATGTTCAGGAGATTACTGAAAGAGATGG
CAGCCAAGGTCTTAATCCAACTCTGTGTTGCTTTATTCATTGTGGTTTTA
ACATTTGTAACTGGTATAGAACAGACAGATAAACCAGTAATGTGTATGAC
CGTTGCATTTGTTCTTCATTACTTCACGCTGGTATCATTTTTCTGGATGT
TGATGGAGGCGTCTTTCATGTATCACGCCTTTGTTAGGGTGTGGCCGCCA
CGACAGGGCGGAGATATATACAAGTCAACTGTTGTAGCTTGGGGGATCCC
CTTGTTCATTGTGGGAATCACCTTTTTGACAAGCATGGATAATTATGGTG
GCTCGCACTACTGTCACCTGACAGGCACCCCATTGATTGCTTCATATTTG
GCGCCCATCGGTCTCATCATCCTCATCAATTTCGTCATCTTCATATTCAT
CATGATGAAGCTGGACGGCCGCCCCAATGGAAACACAGATCAAAACAGTT
TGCAACTCGCAACCGCCCGTCTAAGACGCGCGTTTGGTATCATGATCCTG
ATGGGCTTGACGTGGGCGTTTGGTTTTGGTCAGCTGACGGACGCGCGCTT
GGAATTCTCTTACTTGTTTTCAGTTTTCAACGCGTCTCAAGGGTTTTCCA
TCTTCATTTTCTACGTCACAGCCCAGAAACGTGCGCGCTCTCAATGGATC
GCTTTCTTCAAGTGTGACGGCCGCTCAGAGAACAAGCGCACGACTGATTC
GTATTTTTCGGAACGACGCAGAATAAATACCATGCAGTTTAACAGGCTCG
GATCGAGTGCTTCAAGTGTAATGTTAGAGAAATGGTTGGAAGAACTTCCT
CCCTCTGAAAAGAAGCTAGAAGAAGAATCTGAGAACGTGATTGTCCAAAA
GATCTTCATCCATAAACATAAGCTAGAAGAAGGAATCAATTTTGCCAAAG
AAGATCTGGAGAAATCTGGTGGTGTTGAAATGCATATTCCCAAAGAAGCT
ATCCCTGGAAACGGTACGGCCGATTCCATTTATTTTGTGTACTACAAAAA
GAACAAATTCTTTAACGGTAACAAACGTTTGGAAGAGCTGTGCATCAACG
GTTTTACGGTCTTCAAAGAACGAGTTTTCACACCGGTCGTATCCGGGGAA
GTGGTCGGACAAACAACCCGGAACTTGAGTGCACCTGTTGTCTTGAAGTT
CCGGCATACCGAAGATGAGGCCAAACTTCGCAAGACAGCATGTGCTTATT
GGGATTACGAAGCAGACAATGAGAAAGGAGGGTGGAGTACAGAAGGCTGT
ACGGTGGAGAGCATAGCCAATCAAACCATCACGTGTCATTGTAACCATCT
GACCAACTTTGCTGCCATGATGGACGTGTACGCAGAGACAAGTACAATTT
GCGGCAAACATCGCAAGATTATCTCCTTCATAACGGTGATAGGGTGTTTC
TTGTCGCTCATTGGTCTTTTCCTGACATTCTTGACGTACTTCATGTTCAG
GAGATTACTGAAAGAGATGGCAGCCAAGGTCTTAATCCAACTCTGTGTTG
CTTTATTCATTGTGGTTTTAACATTTGTAACTGGTATAGAACAGACAGAT
AAACCAGTAATGTGTATGACCGTTGCATTTGTTCTTCATTACTTCACGCT
GGTATCATTTTTCTGGATGTTGATGGAGGCGTCTTTCATGTATCACGCCT
TTGTTAGGGTGTGGCCGCCACGACAGGGCGGAGATATATACAAGTCAACT
GTTGTAGCTTGGGGGATCCCCTTGTTCATTGTGGGAATCACCTTTTTGAC
AAGCATGGATAATTATGGTGGCTCGCACTACTGTCACCTGACAGGCACCC
CATTGATTGCTTCATATTTGGCGCCCATCGGTCTCATCATCCTCATCAAT
TTCGTCATCTTCATATTCATCATGATGAAGCTGGACGGCCGCCCCAATGG
AAACACAGATCAAAACAGTTTGCAACTCGCAACCGCCCGTCTAAGACGCG
CGTTTGGTATCATGATCCTGATGGGCTTGACGTGGGCGTTTGGTTTTGGT
CAGCTGACGGACGCGCGCTTGGAATTCTCTTACTTGTTTTCAGTTTTCAA
CGCGTCTCAAGGGTTTTCCATCTTCATTTTCTACGTCACAGCCCAGAAAC
GTGCGCGCTCTCAATGGATCGCTTTCTTCAAGTGTGACGGCCGCTCAGAG
AACAAGCGCACGACTGATTCGTATTTTTCGGAACGACGCAGAATAAATAC
CATGCAGTTTAACAGGCTCGGATCGAGTGCTTCAAGTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027080XLOC_027080Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043375-proteinTCONS_00043375-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043375-exon-sc0004169-1491911889:17..58TCONS_00043375-exon-sc0004169-1491911889:17..58Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:17..58TCONS_00043375-exon-sc0004169-1510915933:17..58Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:17..58TCONS_00043375-exon-sc0004169-1575043694:17..58Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:709..895TCONS_00043375-exon-sc0004169-1491911889:709..895Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:709..895TCONS_00043375-exon-sc0004169-1510915933:709..895Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:709..895TCONS_00043375-exon-sc0004169-1575043694:709..895Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:2433..2651TCONS_00043375-exon-sc0004169-1491911889:2433..2651Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:2433..2651TCONS_00043375-exon-sc0004169-1510915933:2433..2651Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:2433..2651TCONS_00043375-exon-sc0004169-1575043694:2433..2651Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:3457..3612TCONS_00043375-exon-sc0004169-1491911889:3457..3612Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:3457..3612TCONS_00043375-exon-sc0004169-1510915933:3457..3612Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:3457..3612TCONS_00043375-exon-sc0004169-1575043694:3457..3612Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:3982..4109TCONS_00043375-exon-sc0004169-1491911889:3982..4109Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:3982..4109TCONS_00043375-exon-sc0004169-1510915933:3982..4109Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:3982..4109TCONS_00043375-exon-sc0004169-1575043694:3982..4109Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:5706..5968TCONS_00043375-exon-sc0004169-1491911889:5706..5968Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:5706..5968TCONS_00043375-exon-sc0004169-1510915933:5706..5968Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:5706..5968TCONS_00043375-exon-sc0004169-1575043694:5706..5968Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:6461..6527TCONS_00043375-exon-sc0004169-1491911889:6461..6527Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:6461..6527TCONS_00043375-exon-sc0004169-1510915933:6461..6527Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:6461..6527TCONS_00043375-exon-sc0004169-1575043694:6461..6527Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1491911889:7086..7546TCONS_00043375-exon-sc0004169-1491911889:7086..7546Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1510915933:7086..7546TCONS_00043375-exon-sc0004169-1510915933:7086..7546Clytia hemisphaericaexon
TCONS_00043375-exon-sc0004169-1575043694:7086..7546TCONS_00043375-exon-sc0004169-1575043694:7086..7546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004169supercontigsc0004169:17..7546 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.124412	0.129383	0.0759733	0.0619778	8.3888	9.70918	8.06647	10.5301	4.99234	6.89417	7.77036	4.58641	5.29513	4.58555	0.76419	0.484289	0.538314	1.13877	1.11605	1.31329	0.98863	0.733434	0.316955	0.677331	4.33499	9.06076	0	0	2.43713	2.91217
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
Blast
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BLAST of TCONS_00043375 vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.349e-49
Identity = 123/347 (35.45%), Postives = 184/347 (53.03%), Query Frame = 2 
Query:  401 RNLSAPVVLKFRHTEDEAKLRKTACAYWDYEADNEKGGWSTEGCTV-ESIANQTITCHCNHLTNFAAMMDVYAETSTICGKHRKIISFITVIGCFLSLIGLFLTFLTYFMFRRLLKEMAAKVLIQLCVALFIVVLTFVTG--IEQTDKPVMCMTVAFVLHYFTLVSFFWMLMEASFMYHAFVRVWPPRQGGDIYKSTVVAWGIPLFIVGITFLTSMDNYG----GSHYCHLTGTPLI-ASYLAPXXXXXXXXXXXXXXXMMKLDGRPNGNTDQNSLQLATARLRRAFGIMILMGLTWAFGFGQLTDARLEFSYLFSVFNASQGFSIFIFYVTAQKRARSQWIAFFKC 1417
            +NL+ PVV+  +H        +  CA+WD+E +N  GGW++ GC V E+  N TI C C+HLT+F  +MD+    ST+   + +I++ IT  GC +S I L +  +TY  F +L K+  AK+LI LC AL ++ L F+    +    K  +C+T A  LHYF LVSF WM +EA  MY A V+V+       I K  +V WGIP  +V IT     D YG     + +C +    +   S +A   LI L+N  +F  ++++L+        +   ++    L+    +  L+GLTW F F      R  F YLF++FN  QGF IF+F+   ++  R QW     C
Sbjct: 2661 QNLADPVVITLQHIGGNQNYGQVHCAFWDFENNNGLGGWNSSGCKVKETNVNYTI-CQCDHLTHFGVLMDL--SRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPNYILKFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNSV-KSQIQKTRRKMILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQWQIHLCC 3003
The following BLAST results are available for this feature:
BLAST of TCONS_00043375 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG44.349e-4935.45Adhesion G-protein coupled receptor G4 OS=Homo sap... [more]
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