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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043387 ID=TCONS_00043387|Name=TCONS_00043387|organism=Clytia hemisphaerica|type=transcript|length=1090bp
cttCCTCTAGAAAAAAACGCCTCATTCCTTAAAAGTCGAATTAAAGATTC
TCAACTGTATAAAGTTCGATTGAAAGACCGATTCTTATTTAGACTGACTC
GCAAAGTTTATCTTTCAAACTGAAcaaggaaaaaaagacttacCAACATT
CCACTAACCACCAACACTTTCCTTGAGAacagtatttttcttttttcgaa
tgAACGATATACAAATAATATgctttgtttataaaaaaatcactacaaaa
aaaaaatatttgacgtcaatatttttaaaagttaatACATTTGGCGTCAT
TCTCATTCATTAGGTCAATAGGGCGTATCCATCGGTAATATAGGTATCTT
TCTTGAAGACAAAGTCGAATCATGTGACAGGGTATAATAATATTAGAGAA
GCTGCCGATTTTTATGAACTCAATTATCCCGAGTTAAATTTTTGGTAGTG
ATTGTTCGATGAGGAGTCACCTTAGAAGCGATAGCTGAGTGGTCATCGGC
ATAAACCCGGAATTGCCAGCTTTTAAATACCCTCTCTTTCAAATGTTCCG
TTTTGTCCGTAGATAGCCGAGTCGGTTagtcgtggaattttttaaaagaa
tcgtCTTGGATAACTGCTACtgtatccacgtaaaatattggctctaaaaa
agctaaaaaatcttgaaatggGAAATATGGCAACTCAAACCGAATGTACC
GAAGTTATAATAGGCATGTGTTGATTTTGTTGCGTCTCACTATTGATTTT
CCGTTTGCACGTTAGTAAGAGTTTTTGTATTTCAATTTTGAGTTCATCTT
TTGAATCGCAGTCAGGGATTTGTGATAATTGTGTTTTCAACAAGTTACAA
AATAAATCGTCACCCTCGTTGTAAACGCTTCGTGAAGGCTGTACTACGGA
TCGTTGCGTTATTTCGTTTGTTGAGATGTTTGAAATTGGTGCTGAAATGA
AATTATTATAATACTTTTATGGGATAaaagtagtaagtaagtaagtaagt
aagtaactatttatttaccatttgaaCACTTAAAATACATGAGACGGtat
ccacaaaataaaaaaggatgGAGACCGCCTTATAGCCTNN Run BLAST on NCBI transcript from alignment at sc0004182:1633..2722 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043387 ID=TCONS_00043387|Name=TCONS_00043387|organism=Clytia hemisphaerica|type=transcript|length=1090bp|location=Sequence derived from alignment at sc0004182:1633..2722 (Clytia hemisphaerica)
NNAGGCTATAAGGCGGTCTCcatccttttttattttgtggataCCGTCTC
ATGTATTTTAAGTGttcaaatggtaaataaatagttacttacttacttac
ttacttactactttTATCCCATAAAAGTATTATAATAATTTCATTTCAGC
ACCAATTTCAAACATCTCAACAAACGAAATAACGCAACGATCCGTAGTAC
AGCCTTCACGAAGCGTTTACAACGAGGGTGACGATTTATTTTGTAACTTG
TTGAAAACACAATTATCACAAATCCCTGACTGCGATTCAAAAGATGAACT
CAAAATTGAAATACAAAAACTCTTACTAACGTGCAAACGGAAAATCAATA
GTGAGACGCAACAAAATCAACACATGCCTATTATAACTTCGGTACATTCG
GTTTGAGTTGCCATATTTCccatttcaagattttttagcttttttagagc
caatattttacgtggatacaGTAGCAGTTATCCAAGacgattcttttaaa
aaattccacgactAACCGACTCGGCTATCTACGGACAAAACGGAACATTT
GAAAGAGAGGGTATTTAAAAGCTGGCAATTCCGGGTTTATGCCGATGACC
ACTCAGCTATCGCTTCTAAGGTGACTCCTCATCGAACAATCACTACCAAA
AATTTAACTCGGGATAATTGAGTTCATAAAAATCGGCAGCTTCTCTAATA
TTATTATACCCTGTCACATGATTCGACTTTGTCTTCAAGAAAGATACCTA
TATTACCGATGGATACGCCCTATTGACCTAATGAATGAGAATGACGCCAA
ATGTattaacttttaaaaatattgacgtcaaatattttttttttgtagtg
atttttttataaacaaagcATATTATTTGTATATCGTTcattcgaaaaaa
gaaaaatactgtTCTCAAGGAAAGTGTTGGTGGTTAGTGGAATGTTGgta
agtctttttttccttgTTCAGTTTGAAAGATAAACTTTGCGAGTCAGTCT
AAATAAGAATCGGTCTTTCAATCGAACTTTATACAGTTGAGAATCTTTAA
TTCGACTTTTAAGGAATGAGGCGTTTTTTTCTAGAGGaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043387-exon-sc0004182-1491911889:1633..2722 | TCONS_00043387-exon-sc0004182-1491911889:1633..2722 | Clytia hemisphaerica | exon |
| TCONS_00043387-exon-sc0004182-1510915933:1633..2722 | TCONS_00043387-exon-sc0004182-1510915933:1633..2722 | Clytia hemisphaerica | exon |
| TCONS_00043387-exon-sc0004182-1575043694:1633..2722 | TCONS_00043387-exon-sc0004182-1575043694:1633..2722 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004182 | supercontig | sc0004182:1633..2722 . |
Blast
The following BLAST results are available for this feature:
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