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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043389 ID=TCONS_00043389|Name=TCONS_00043389|organism=Clytia hemisphaerica|type=transcript|length=1011bp
CGCACAGCGCGAAACATAGCTGAATACGGGAGTATGTCGATTTCTGTTTT
GATACGCATCCGTGAGTATACAGTGCCGTATACGAATAAAACGTATATGG
AGTATAAATTTTCCCGTAAACATATCATTAGGATTTATATTCCCGGTTAC
GTTATATTCTTTTCGGATAACCCATTATAGGTATACTGTGTTCAGATATC
ATTTTATACTCTATGGGTGTCGCTACACTCACGCCCGTTCAAAGTAAAAA
CATTCGCCCTTACTAGGTTCCAGctccttttttgattttatcaaacGCAC
ATAAACAACAAAGCAGTCTTCTAGAATTTGGCGGCAAGCAAGATGGCGGA
AAGTTCCCATTGAACTTAAGGTTTGAAGCAGTTGAAGTAACACGAAGGAC
TTTATTGTCAAGAATAACAGAATTTACTCCAAGCTaagtatattttatta
tttctttacAACTACTATTGTTTTTTTGGGATTAAAGAAAGTTGTTAAAA
GATGATAAGAAAGATTTAAGGCAGAAAAAAGGTATactgtttgaaatgtt
ttatgGCTTTTGATGCATTTTTTTTCAAGGACGATGTTGATATTATTTTA
TTGCTGTACATTATATGCTGCATTGTATagtaaagagaaaagaaagCTTG
AATGGTTGAAttacagattttgaaaataatttttcagattACTGTAGCTA
GCTAGAGGATTCTGTTTTTATGTTGTGTTGTGTTTGTATTCTCTTTATTT
TAGTTTTAcacatattttgattttgtccATATTATAGTAAAATTCTTTTA
ATGTAtgtaaatttttgaacaaatatttcCACTTACGACTTATGGCAAat
gcaaaaactaaatttgagtCGATTTGTTGATTAGAGATGGATCATTATTT
CTCCCTTAGATCTTTTTGAAACACTGTAATATCTGGCATATGTGTAGTCA
TCAAGCATGCCAAACACATATCAGCATTAGCCATTCAATAGAGTGTCAAA
ATGTGGATANN Run BLAST on NCBI transcript from alignment at sc0004184:300..1310+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043389 ID=TCONS_00043389|Name=TCONS_00043389|organism=Clytia hemisphaerica|type=transcript|length=1011bp|location=Sequence derived from alignment at sc0004184:300..1310+ (Clytia hemisphaerica)
CGCACAGCGCGAAACATAGCTGAATACGGGAGTATGTCGATTTCTGTTTT
GATACGCATCCGTGAGTATACAGTGCCGTATACGAATAAAACGTATATGG
AGTATAAATTTTCCCGTAAACATATCATTAGGATTTATATTCCCGGTTAC
GTTATATTCTTTTCGGATAACCCATTATAGGTATACTGTGTTCAGATATC
ATTTTATACTCTATGGGTGTCGCTACACTCACGCCCGTTCAAAGTAAAAA
CATTCGCCCTTACTAGGTTCCAGctccttttttgattttatcaaacGCAC
ATAAACAACAAAGCAGTCTTCTAGAATTTGGCGGCAAGCAAGATGGCGGA
AAGTTCCCATTGAACTTAAGGTTTGAAGCAGTTGAAGTAACACGAAGGAC
TTTATTGTCAAGAATAACAGAATTTACTCCAAGCTaagtatattttatta
tttctttacAACTACTATTGTTTTTTTGGGATTAAAGAAAGTTGTTAAAA
GATGATAAGAAAGATTTAAGGCAGAAAAAAGGTATactgtttgaaatgtt
ttatgGCTTTTGATGCATTTTTTTTCAAGGACGATGTTGATATTATTTTA
TTGCTGTACATTATATGCTGCATTGTATagtaaagagaaaagaaagCTTG
AATGGTTGAAttacagattttgaaaataatttttcagattACTGTAGCTA
GCTAGAGGATTCTGTTTTTATGTTGTGTTGTGTTTGTATTCTCTTTATTT
TAGTTTTAcacatattttgattttgtccATATTATAGTAAAATTCTTTTA
ATGTAtgtaaatttttgaacaaatatttcCACTTACGACTTATGGCAAat
gcaaaaactaaatttgagtCGATTTGTTGATTAGAGATGGATCATTATTT
CTCCCTTAGATCTTTTTGAAACACTGTAATATCTGGCATATGTGTAGTCA
TCAAGCATGCCAAACACATATCAGCATTAGCCATTCAATAGAGTGTCAAA
ATGTGGATANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043389-exon-sc0004184-1491911889:300..1310 | TCONS_00043389-exon-sc0004184-1491911889:300..1310 | Clytia hemisphaerica | exon |
| TCONS_00043389-exon-sc0004184-1510915933:300..1310 | TCONS_00043389-exon-sc0004184-1510915933:300..1310 | Clytia hemisphaerica | exon |
| TCONS_00043389-exon-sc0004184-1575043694:300..1310 | TCONS_00043389-exon-sc0004184-1575043694:300..1310 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004184 | supercontig | sc0004184:300..1310 + |
Blast
The following BLAST results are available for this feature:
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