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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043390 ID=TCONS_00043390|Name=TCONS_00043390|organism=Clytia hemisphaerica|type=transcript|length=803bp
ACAGCGCGAAACATAGCTGAATACGGGAGTATGTCGATTTCTGTTTTGAT
ACGCATCCGTTCCAGctccttttttgattttatcaaacGCACATAAACAA
CAAAGCAGTCTTCTAGAATTTGGCGGCAAGCAAGATGGCGGAAAGTTCCC
ATTGAACTTAAGGTTTGAAGCAGTTGAAGTAACACGAAGGACTTTATTGT
CAAGAATAACAGAATTTACTCCAAGCTaagtatattttattatttcttta
cAACTACTATTGTTTTTTTGGGATTAAAGAAAGTTGTTAAAAGATGATAA
GAAAGATTTAAGGCAGAAAAAAGGTATactgtttgaaatgttttatgGCT
TTTGATGCATTTTTTTTCAAGGACGATGTTGATATTATTTTATTGCTGTA
CATTATATGCTGCATTGTATagtaaagagaaaagaaagCTTGAATGGTTG
AAttacagattttgaaaataatttttcagattACTGTAGCTAGCTAGAGG
ATTCTGTTTTTATGTTGTGTTGTGTTTGTATTCTCTTTATTTTAGTTTTA
cacatattttgattttgtccATATTATAGTAAAATTCTTTTAATGTAtgt
aaatttttgaacaaatatttcCACTTACGACTTATGGCAAatgcaaaaac
taaatttgagtCGATTTGTTGATTAGAGATGGATCATTATTTCTCCCTTA
GATCTTTTTGAAACACTGTAATATCTGGCATATGTGTAGTCATCAAGCAT
GCCAAACACATATCAGCATTAGCCATTCAATAGAGTGTCAAAATGTGGAT
ANN Run BLAST on NCBI transcript from alignment at sc0004184:303..1310+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043390 ID=TCONS_00043390|Name=TCONS_00043390|organism=Clytia hemisphaerica|type=transcript|length=1008bp|location=Sequence derived from alignment at sc0004184:303..1310+ (Clytia hemisphaerica)
ACAGCGCGAAACATAGCTGAATACGGGAGTATGTCGATTTCTGTTTTGAT
ACGCATCCGTGAGTATACAGTGCCGTATACGAATAAAACGTATATGGAGT
ATAAATTTTCCCGTAAACATATCATTAGGATTTATATTCCCGGTTACGTT
ATATTCTTTTCGGATAACCCATTATAGGTATACTGTGTTCAGATATCATT
TTATACTCTATGGGTGTCGCTACACTCACGCCCGTTCAAAGTAAAAACAT
TCGCCCTTACTAGGTTCCAGctccttttttgattttatcaaacGCACATA
AACAACAAAGCAGTCTTCTAGAATTTGGCGGCAAGCAAGATGGCGGAAAG
TTCCCATTGAACTTAAGGTTTGAAGCAGTTGAAGTAACACGAAGGACTTT
ATTGTCAAGAATAACAGAATTTACTCCAAGCTaagtatattttattattt
ctttacAACTACTATTGTTTTTTTGGGATTAAAGAAAGTTGTTAAAAGAT
GATAAGAAAGATTTAAGGCAGAAAAAAGGTATactgtttgaaatgtttta
tgGCTTTTGATGCATTTTTTTTCAAGGACGATGTTGATATTATTTTATTG
CTGTACATTATATGCTGCATTGTATagtaaagagaaaagaaagCTTGAAT
GGTTGAAttacagattttgaaaataatttttcagattACTGTAGCTAGCT
AGAGGATTCTGTTTTTATGTTGTGTTGTGTTTGTATTCTCTTTATTTTAG
TTTTAcacatattttgattttgtccATATTATAGTAAAATTCTTTTAATG
TAtgtaaatttttgaacaaatatttcCACTTACGACTTATGGCAAatgca
aaaactaaatttgagtCGATTTGTTGATTAGAGATGGATCATTATTTCTC
CCTTAGATCTTTTTGAAACACTGTAATATCTGGCATATGTGTAGTCATCA
AGCATGCCAAACACATATCAGCATTAGCCATTCAATAGAGTGTCAAAATG
TGGATANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043390-exon-sc0004184-1491911889:303..360 | TCONS_00043390-exon-sc0004184-1491911889:303..360 | Clytia hemisphaerica | exon |
| TCONS_00043390-exon-sc0004184-1510915933:303..360 | TCONS_00043390-exon-sc0004184-1510915933:303..360 | Clytia hemisphaerica | exon |
| TCONS_00043390-exon-sc0004184-1575043694:303..360 | TCONS_00043390-exon-sc0004184-1575043694:303..360 | Clytia hemisphaerica | exon |
| TCONS_00043390-exon-sc0004184-1491911889:566..1310 | TCONS_00043390-exon-sc0004184-1491911889:566..1310 | Clytia hemisphaerica | exon |
| TCONS_00043390-exon-sc0004184-1510915933:566..1310 | TCONS_00043390-exon-sc0004184-1510915933:566..1310 | Clytia hemisphaerica | exon |
| TCONS_00043390-exon-sc0004184-1575043694:566..1310 | TCONS_00043390-exon-sc0004184-1575043694:566..1310 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004184 | supercontig | sc0004184:303..1310 + |
Blast
The following BLAST results are available for this feature:
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