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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043435 ID=TCONS_00043435|Name=TCONS_00043435|organism=Clytia hemisphaerica|type=transcript|length=217bp
CCTGATAATCCAGgtgCCAAGGATCCTTCTTGCTTTAGCGGAAGGATCAT
ACAGGATCATATATTCTTAGTTTACCCAGAATACCCAGCTCACGAGACTT
TATTTGATTAAAGAAAAACCAAACAGTTCTACTCAGACCAATCAGTACCA
ATCACAATCACAgctcacaaaaatttatattttttgaaaaaagaaatacc
CCTCATTGATAATTAAT Run BLAST on NCBI transcript from alignment at sc0004221:6806..7941+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043435 ID=TCONS_00043435|Name=TCONS_00043435|organism=Clytia hemisphaerica|type=transcript|length=1136bp|location=Sequence derived from alignment at sc0004221:6806..7941+ (Clytia hemisphaerica)
CCTGATAATCCAGGTAAGGCTTTTTTCATTATATCTTCTCCCAAAAGTGC
AATTATGCTACAAAGTACCAAAATTGGCCAAGAACCTACATTTTCCTGTG
GATTTCGAATAAAATTAGTCCAAATTGCGCATAATTATGACCCCTCCATT
TTGTTGAGTAACCAATTAAAAGCTCTATCTAGCTATCTATGAAGAATTGT
ATTATTTGTCTCTTTCAGCTCCTGATCAGCTGAATCGATTCTAACTCTGT
TCATCAATATTCTGTCTGCTTCTGGTCCTGGTAATCCAGGTAAGGCATTT
TTCATTATATCTTCTCCCAAAAGTGCAATTTGTAATTATGTTATCTCTTA
AATTCAAGGCCAGTTATGTACTTACAAAGGAAATATGACCTACTCTTTCA
GACGAATTGTAGGGATGGGTTAACTTGCAATCCTTTGCAATCAATTGAAT
AGTCACTTTCCAAAAGGTTGATAAAGGACATCTATTTAGGGAGTAAAACT
TAGatcaaatgaaaatcaaaattttgtagGAATTTTTATTCTCGCTAAAT
TTTGTACTAAATTGTACTAAATTTATGTGGAACAGTTTTCTAAGACGAAT
GCTGATTTTATATATTAGCATTTACTTAGGTATTCTTTAGTGCTCAATTG
TAGGGGGtgtcattttgcaatttttcgacACATATTTTTATCACTTTATA
ATGCCCCCACCACctttttatgacttttatgCTACAAAGTACCAAAATTG
GCCAAGAACCTACATTTTCCGGTGGATTACGAATAAAATCAGTCCAAAAG
CGCTTAATTATGACCCCTTCCATTTTGTTGAGTAACCACGCTCCCCCCCC
ACATATTCCACCCACCCCTACAATAAGCACAGAAGAGTAGCTATCAAAAT
TTAAtcccttttctttctttttcttttttcaggtgCCAAGGATCCTTCTT
GCTTTAGCGGAAGGATCATACAGGATCATATATTCTTAGTTTACCCAGAA
TACCCAGCTCACGAGACTTTATTTGATTAAAGAAAAACCAAACAGTTCTA
CTCAGACCAATCAGTACCAATCACAATCACAgctcacaaaaatttatatt
ttttgaaaaaagaaataccCCTCATTGATAATTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043435-exon-sc0004221-1491911889:6806..6818 | TCONS_00043435-exon-sc0004221-1491911889:6806..6818 | Clytia hemisphaerica | exon |
| TCONS_00043435-exon-sc0004221-1510915933:6806..6818 | TCONS_00043435-exon-sc0004221-1510915933:6806..6818 | Clytia hemisphaerica | exon |
| TCONS_00043435-exon-sc0004221-1575043694:6806..6818 | TCONS_00043435-exon-sc0004221-1575043694:6806..6818 | Clytia hemisphaerica | exon |
| TCONS_00043435-exon-sc0004221-1491911889:7738..7941 | TCONS_00043435-exon-sc0004221-1491911889:7738..7941 | Clytia hemisphaerica | exon |
| TCONS_00043435-exon-sc0004221-1510915933:7738..7941 | TCONS_00043435-exon-sc0004221-1510915933:7738..7941 | Clytia hemisphaerica | exon |
| TCONS_00043435-exon-sc0004221-1575043694:7738..7941 | TCONS_00043435-exon-sc0004221-1575043694:7738..7941 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004221 | supercontig | sc0004221:6806..7941 + |
Blast
The following BLAST results are available for this feature:
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