TCONS_00043444 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043444
Unique NameTCONS_00043444
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043444 ID=TCONS_00043444|Name=TCONS_00043444|organism=Clytia hemisphaerica|type=transcript|length=146bp
AATACCTGGTTCATTTGTTTCAGGAACTAAAgcaacaaaattttccttgt
tcATCATCATTCTTTTAATGTCTACATCTCATACAAATCACCGATAGACA
TGGAAAAAGAATCATTCAAAAGCAATTATTTCTatttaaaatctgt
Run BLAST on NCBI

transcript from alignment at sc0004227:7148..7293

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043444 ID=TCONS_00043444|Name=TCONS_00043444|organism=Clytia hemisphaerica|type=transcript|length=146bp|location=Sequence derived from alignment at sc0004227:7148..7293 (Clytia hemisphaerica)
acagattttaaatAGAAATAATTGCTTTTGAATGATTCTTTTTCCATGTC
TATCGGTGATTTGTATGAGATGTAGACATTAAAAGAATGATGATgaacaa
ggaaaattttgttgcTTTAGTTCCTGAAACAAATGAACCAGGTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027140XLOC_027140Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043444-exon-sc0004227-1491911889:7148..7293TCONS_00043444-exon-sc0004227-1491911889:7148..7293Clytia hemisphaericaexon
TCONS_00043444-exon-sc0004227-1510915933:7148..7293TCONS_00043444-exon-sc0004227-1510915933:7148..7293Clytia hemisphaericaexon
TCONS_00043444-exon-sc0004227-1575043694:7148..7293TCONS_00043444-exon-sc0004227-1575043694:7148..7293Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004227supercontigsc0004227:7148..7293 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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