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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043455 ID=TCONS_00043455|Name=TCONS_00043455|organism=Clytia hemisphaerica|type=transcript|length=1328bp
GTAGAAAAAGTCAAATAATCAAAAATGAATGAAAAAGAAAGTAAACAAAC
TGAATCTTGTAATGGAGACAATGGAGATCTAACTAGTCCCAAAAAGAAGT
ATAGAGTAACTCACGTGCGAAGCGAGGCTGGAAAGAAGAGGCGAAATGCA
AAGAAAAATCAGAATAAGAAAGATAAGAAGAAACGGGAATATGCCAAGAA
AGTTGAAACAGAATTGGAGAAGGATGCGAAGATTAGAGAACTTGAAAGCA
AAAACGCAATTCTGAGCCGTGAGTTAAAATCAAAGAAACAACCAACAAGA
CCTTTTGTATCGCGATTCAGTTTGCCGAGATCAATTCTGGATTCATCAAG
AACTAAAGCAGTTTGCTTAAATCAACAGCTGACCGCCAGACCTACCGAAT
TCAAGAGGAATGAACTTCAGTTAAACCCGGAGCCCTTAGGAAAAGGTGTC
TATGGAAAACTTTACCGTGGTAGATTGTCGAACTTCTGCCAAGAATTAGC
TGTCAAGGAAATAATTGGCCAAAACACTTCACTGAGTGCTTACGTAGAAG
CTAAGATTATGATGTCATTGAGCGGACACAAAAATCTACCGCTATTTTTT
GGTTGGATAAAACCGAACTTGATTCTCCTGGAATTCATTGGCTCTAACTC
AATTTCGAGTCTAACTCTCCACTCTGCTCTCCAGATCGAAGACAGAAAAA
TTGAATGGCTTCCCATCTTGGTCGATCTTCTTTTGGCAGTAAAGTTTGTA
CACGACAGTGGTTTTCTCCATAACGACTTGCACGGAGGAAACGTTTTACT
ACGCGATCTGAAATATGTCAAATTAATCGACTTCGGCAAAGCTACATTTA
TCGATGACCCTGTCATTTACAATCTTCAGCCAGGCTCGGCGAAACAGAAA
CTGTATAATGAGCGGCATATTCACTTAGCACATGAACTCCGTAACGTTCC
TCGCTCTCCACAAACCATTCAAACGGATATATATTCTCTGGGTTACATTT
TGGAGCTACTGAGTAACACTCTGAAGAATTTGAAATTGGCGAATATCTGC
CACGATATGATGAAGCAACCACCAATCGAACGTCTATCGCTACCACAAGC
TGTTTTGAAAGTTGAGCGattgaaatataaaattaaCTAGATTTTATCAC
AGATTTTTCATTTANCGTCTATCGCTACCACAAGCTGTTTTGAAAGTTGA
GCGattgaaatataaaattaaCTAGATTTTATCAtagatttttcatttaa
atgtaaattttatgattttgatcgATCTATCgagcatttttcattaaaaa
gaaaatggaaaaaactaCCAATTTTACC Run BLAST on NCBI protein sequence of TCONS_00043455-protein >TCONS_00043455-protein ID=TCONS_00043455-protein|Name=TCONS_00043455-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MNEKESKQTESCNGDNGDLTSPKKKYRVTHVRSEAGKKRRNAKKNQNKKD
KKKREYAKKVETELEKDAKIRELESKNAILSRELKSKKQPTRPFVSRFSL
PRSILDSSRTKAVCLNQQLTARPTEFKRNELQLNPEPLGKGVYGKLYRGR
LSNFCQELAVKEIIGQNTSLSAYVEAKIMMSLSGHKNLPLFFGWIKPNLI
LLEFIGSNSISSLTLHSALQIEDRKIEWLPILVDLLLAVKFVHDSGFLHN
DLHGGNVLLRDLKYVKLIDFGKATFIDDPVIYNLQPGSAKQKLYNERHIH
LAHELRNVPRSPQTIQTDIYSLGYILELLSNTLKNLKLANICHDMMKQPP
IERLSLPQAVLKVERLKYKIN Run BLAST on NCBI transcript from alignment at sc0004235:6225..7746+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043455 ID=TCONS_00043455|Name=TCONS_00043455|organism=Clytia hemisphaerica|type=transcript|length=1522bp|location=Sequence derived from alignment at sc0004235:6225..7746+ (Clytia hemisphaerica)
GTAGAAAAAGTCAAATAATCAAAAATGAATGAAAAAGAAAGTAAACAAAC
TGAATCTTGTAATGGAGACAATGGAGATCTAACTAGTCCCAAAAAGAAGT
ATAGGTAAGCATAAGATTTCAAAATTAACTTTCATTGTTACGCCTGGTTA
CGCAGCTTCGAAAAACGGTTTTCTATTGAAAGCTCTGAAGTTTTGACAAT
GGTTCGTATCTAAATTAAATGCCTTTGGTCGATGAAAGAGTAGGTGGTAT
AAAAATAGTCAAAACGAAAATATTTACTTCATTTTCTTTATTTTTCAGAG
TAACTCACGTGCGAAGCGAGGCTGGAAAGAAGAGGCGAAATGCAAAGAAA
AATCAGAATAAGAAAGATAAGAAGAAACGGGAATATGCCAAGAAAGTTGA
AACAGAATTGGAGAAGGATGCGAAGATTAGAGAACTTGAAAGCAAAAACG
CAATTCTGAGCCGTGAGTTAAAATCAAAGAAACAACCAACAAGACCTTTT
GTATCGCGATTCAGTTTGCCGAGATCAATTCTGGATTCATCAAGAACTAA
AGCAGTTTGCTTAAATCAACAGCTGACCGCCAGACCTACCGAATTCAAGA
GGAATGAACTTCAGTTAAACCCGGAGCCCTTAGGAAAAGGTGTCTATGGA
AAACTTTACCGTGGTAGATTGTCGAACTTCTGCCAAGAATTAGCTGTCAA
GGAAATAATTGGCCAAAACACTTCACTGAGTGCTTACGTAGAAGCTAAGA
TTATGATGTCATTGAGCGGACACAAAAATCTACCGCTATTTTTTGGTTGG
ATAAAACCGAACTTGATTCTCCTGGAATTCATTGGCTCTAACTCAATTTC
GAGTCTAACTCTCCACTCTGCTCTCCAGATCGAAGACAGAAAAATTGAAT
GGCTTCCCATCTTGGTCGATCTTCTTTTGGCAGTAAAGTTTGTACACGAC
AGTGGTTTTCTCCATAACGACTTGCACGGAGGAAACGTTTTACTACGCGA
TCTGAAATATGTCAAATTAATCGACTTCGGCAAAGCTACATTTATCGATG
ACCCTGTCATTTACAATCTTCAGCCAGGCTCGGCGAAACAGAAACTGTAT
AATGAGCGGCATATTCACTTAGCACATGAACTCCGTAACGTTCCTCGCTC
TCCACAAACCATTCAAACGGATATATATTCTCTGGGTTACATTTTGGAGC
TACTGAGTAACACTCTGAAGAATTTGAAATTGGCGAATATCTGCCACGAT
ATGATGAAGCAACCACCAATCGAACGTCTATCGCTACCACAAGCTGTTTT
GAAAGTTGAGCGattgaaatataaaattaaCTAGATTTTATCACAGATTT
TTCATTTANCGTCTATCGCTACCACAAGCTGTTTTGAAAGTTGAGCGatt
gaaatataaaattaaCTAGATTTTATCAtagatttttcatttaaatgtaa
attttatgattttgatcgATCTATCgagcatttttcattaaaaagaaaat
ggaaaaaactaCCAATTTTACC Coding sequence (CDS) from alignment at sc0004235:6225..7746+ >TCONS_00043455 ID=TCONS_00043455|Name=TCONS_00043455|organism=Clytia hemisphaerica|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0004235:6225..7746+ (Clytia hemisphaerica)
ATGAATGAAAAAGAAAGTAAACAAACTGAATCTTGTAATGGAGACAATGG
AGATCTAACTAGTCCCAAAAAGAAGTATAGAGTAACTCACGTGCGAAGCG
AGGCTGGAAAGAAGAGGCGAAATGCAAAGAAAAATCAGAATAAGAAAGAT
AAGAAGAAACGGGAATATGCCAAGAAAGTTGAAACAGAATTGGAGAAGGA
TGCGAAGATTAGAGAACTTGAAAGCAAAAACGCAATTCTGAGCCGTGAGT
TAAAATCAAAGAAACAACCAACAAGACCTTTTGTATCGCGATTCAGTTTG
CCGAGATCAATTCTGGATTCATCAAGAACTAAAGCAGTTTGCTTAAATCA
ACAGCTGACCGCCAGACCTACCGAATTCAAGAGGAATGAACTTCAGTTAA
ACCCGGAGCCCTTAGGAAAAGGTGTCTATGGAAAACTTTACCGTGGTAGA
TTGTCGAACTTCTGCCAAGAATTAGCTGTCAAGGAAATAATTGGCCAAAA
CACTTCACTGAGTGCTTACGTAGAAGCTAAGATTATGATGTCATTGAGCG
GACACAAAAATCTACCGCTATTTTTTGGTTGGATAAAACCGAACTTGATT
CTCCTGGAATTCATTGGCTCTAACTCAATTTCGAGTCTAACTCTCCACTC
TGCTCTCCAGATCGAAGACAGAAAAATTGAATGGCTTCCCATCTTGGTCG
ATCTTCTTTTGGCAGTAAAGTTTGTACACGACAGTGGTTTTCTCCATAAC
GACTTGCACGGAGGAAACGTTTTACTACGCGATCTGAAATATGTCAAATT
AATCGACTTCGGCAAAGCTACATTTATCGATGACCCTGTCATTTACAATC
TTCAGCCAGGCTCGGCGAAACAGAAACTGTATAATGAGCGGCATATTCAC
TTAGCACATGAACTCCGTAACGTTCCTCGCTCTCCACAAACCATTCAAAC
GGATATATATTCTCTGGGTTACATTTTGGAGCTACTGAGTAACACTCTGA
AGAATTTGAAATTGGCGAATATCTGCCACGATATGATGAAGCAACCACCA
ATCGAACGTCTATCGCTACCACAAGCTGTTTTGAAAGTTGAGCGattgaa
atataaaattaaCTAGATGAATGAAAAAGAAAGTAAACAAACTGAATCTT
GTAATGGAGACAATGGAGATCTAACTAGTCCCAAAAAGAAGTATAGAGTA
ACTCACGTGCGAAGCGAGGCTGGAAAGAAGAGGCGAAATGCAAAGAAAAA
TCAGAATAAGAAAGATAAGAAGAAACGGGAATATGCCAAGAAAGTTGAAA
CAGAATTGGAGAAGGATGCGAAGATTAGAGAACTTGAAAGCAAAAACGCA
ATTCTGAGCCGTGAGTTAAAATCAAAGAAACAACCAACAAGACCTTTTGT
ATCGCGATTCAGTTTGCCGAGATCAATTCTGGATTCATCAAGAACTAAAG
CAGTTTGCTTAAATCAACAGCTGACCGCCAGACCTACCGAATTCAAGAGG
AATGAACTTCAGTTAAACCCGGAGCCCTTAGGAAAAGGTGTCTATGGAAA
ACTTTACCGTGGTAGATTGTCGAACTTCTGCCAAGAATTAGCTGTCAAGG
AAATAATTGGCCAAAACACTTCACTGAGTGCTTACGTAGAAGCTAAGATT
ATGATGTCATTGAGCGGACACAAAAATCTACCGCTATTTTTTGGTTGGAT
AAAACCGAACTTGATTCTCCTGGAATTCATTGGCTCTAACTCAATTTCGA
GTCTAACTCTCCACTCTGCTCTCCAGATCGAAGACAGAAAAATTGAATGG
CTTCCCATCTTGGTCGATCTTCTTTTGGCAGTAAAGTTTGTACACGACAG
TGGTTTTCTCCATAACGACTTGCACGGAGGAAACGTTTTACTACGCGATC
TGAAATATGTCAAATTAATCGACTTCGGCAAAGCTACATTTATCGATGAC
CCTGTCATTTACAATCTTCAGCCAGGCTCGGCGAAACAGAAACTGTATAA
TGAGCGGCATATTCACTTAGCACATGAACTCCGTAACGTTCCTCGCTCTC
CACAAACCATTCAAACGGATATATATTCTCTGGGTTACATTTTGGAGCTA
CTGAGTAACACTCTGAAGAATTTGAAATTGGCGAATATCTGCCACGATAT
GATGAAGCAACCACCAATCGAACGTCTATCGCTACCACAAGCTGTTTTGA
AAGTTGAGCGattgaaatataaaattaaCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043455-exon-sc0004235-1491911889:6225..6328 | TCONS_00043455-exon-sc0004235-1491911889:6225..6328 | Clytia hemisphaerica | exon |
| TCONS_00043455-exon-sc0004235-1510915933:6225..6328 | TCONS_00043455-exon-sc0004235-1510915933:6225..6328 | Clytia hemisphaerica | exon |
| TCONS_00043455-exon-sc0004235-1575043694:6225..6328 | TCONS_00043455-exon-sc0004235-1575043694:6225..6328 | Clytia hemisphaerica | exon |
| TCONS_00043455-exon-sc0004235-1491911889:6523..7746 | TCONS_00043455-exon-sc0004235-1491911889:6523..7746 | Clytia hemisphaerica | exon |
| TCONS_00043455-exon-sc0004235-1510915933:6523..7746 | TCONS_00043455-exon-sc0004235-1510915933:6523..7746 | Clytia hemisphaerica | exon |
| TCONS_00043455-exon-sc0004235-1575043694:6523..7746 | TCONS_00043455-exon-sc0004235-1575043694:6523..7746 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004235 | supercontig | sc0004235:6225..7746 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
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