|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043503 ID=TCONS_00043503|Name=TCONS_00043503|organism=Clytia hemisphaerica|type=transcript|length=959bp
AGGGGTCTCTCTGAACCTTGCACTAAACATCTCGAATACTAATATATTAA
AATCGGAAGACAAACACTTACCAGGCTTTGGATGCGAAGATGAATAACTG
ACAATtggatctaaaaaagaaaaaagagagcAGCAGACGGCAAGCAAAAC
AAATGGCGCTTTAGAGATTGTATTAtccatttgatttgaaaaagacTTTC
AGAAGCAGCTTTAAGAAATTAAATTAAAGGTTTGATCAACATCGTAATAT
AATCTGTCAAAGAATAaggcaaaataatttttgaaaattttctaaagcAG
TGGATAACGGGTTTAGATATGCAGCCTCCAATAAAATGCTTAGCTCTGTC
TAACCTAAACAAAACTTTGTCTCCCAAAACTTATTCATCTGCTTGTTTTA
AAAGCATCCTTGAGTAGTGTAGACTTTGTGATACATAATGTTGGATTGAA
TTATTTAGTacattgagaaaaaatgaacattgaataaaattattttgcaa
aaagataGTTAATCTGAATGCTCATGTATACATCcaaatttttcgcgtgt
attaattttcgcgattcaCTCAAGATATATGTGAAGAAAAAGGGTTAAAA
CAAGTagtatcaaaaaaataattctctttaattttcgaaaatttcgcaat
ttttaacctattttgaatttttcgtgattttgaaaaatttaaacactcGA
GAAACTAAAATATTAACACTTAAGATAGCTTTGCTTTTGACACACCTGTG
CAAACAATAAAACCTAAGCCTGAGAGAAGCTGTAAGAAACAGGAATTTAG
CATCAAACGAgttgaaattaaaaagtttcaGTGATAACTTAAAATTGAAT
CttaatccaaatttaacaaatttttttcCTCTAAGTTAAAGAGTAGGGTG
AAACGGTGCCCCACAACCCGCACCGTTCGTCTATCGCTACCAACTTAACC
TAACAGAAG Run BLAST on NCBI transcript from alignment at sc0004295:1..959 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043503 ID=TCONS_00043503|Name=TCONS_00043503|organism=Clytia hemisphaerica|type=transcript|length=959bp|location=Sequence derived from alignment at sc0004295:1..959 (Clytia hemisphaerica)
CTTCTGTTAGGTTAAGTTGGTAGCGATAGACGAACGGTGCGGGTTGTGGG
GCACCGTTTCACCCTACTCTTTAACTTAGAGgaaaaaaatttgttaaatt
tggattaaGATTCAATTTTAAGTTATCACtgaaactttttaatttcaacT
CGTTTGATGCTAAATTCCTGTTTCTTACAGCTTCTCTCAGGCTTAGGTTT
TATTGTTTGCACAGGTGTGTCAAAAGCAAAGCTATCTTAAGTGTTAATAT
TTTAGTTTCTCgagtgtttaaatttttcaaaatcacgaaaaattcaaaat
aggttaaaaattgcgaaattttcgaaaattaaagagaattatttttttga
tactACTTGTTTTAACCCTTTTTCTTCACATATATCTTGAGtgaatcgcg
aaaattaatacacgcgaaaaatttgGATGTATACATGAGCATTCAGATTA
ACtatctttttgcaaaataattttattcaatgttcattttttctcaatgt
ACTAAATAATTCAATCCAACATTATGTATCACAAAGTCTACACTACTCAA
GGATGCTTTTAAAACAAGCAGATGAATAAGTTTTGGGAGACAAAGTTTTG
TTTAGGTTAGACAGAGCTAAGCATTTTATTGGAGGCTGCATATCTAAACC
CGTTATCCACTgctttagaaaattttcaaaaattattttgcctTATTCTT
TGACAGATTATATTACGATGTTGATCAAACCTTTAATTTAATTTCTTAAA
GCTGCTTCTGAAAgtctttttcaaatcaaatggaTAATACAATCTCTAAA
GCGCCATTTGTTTTGCTTGCCGTCTGCTgctctcttttttcttttttaga
tccaATTGTCAGTTATTCATCTTCGCATCCAAAGCCTGGTAAGTGTTTGT
CTTCCGATTTTAATATATTAGTATTCGAGATGTTTAGTGCAAGGTTCAGA
GAGACCCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043503-exon-sc0004295-1491911889:1..959 | TCONS_00043503-exon-sc0004295-1491911889:1..959 | Clytia hemisphaerica | exon |
| TCONS_00043503-exon-sc0004295-1510915933:1..959 | TCONS_00043503-exon-sc0004295-1510915933:1..959 | Clytia hemisphaerica | exon |
| TCONS_00043503-exon-sc0004295-1575043694:1..959 | TCONS_00043503-exon-sc0004295-1575043694:1..959 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004295 | supercontig | sc0004295:1..959 . |
Blast
The following BLAST results are available for this feature:
|
