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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043596 ID=TCONS_00043596|Name=TCONS_00043596|organism=Clytia hemisphaerica|type=transcript|length=1173bp
CCCCCCATTAAATTATTGAGAAAAACAGAGTTTCTAGGCTATAAAAACCC
GTGATTTTTATATGTACAGGTGAACTTATGTTATTAGTGACGGAAAAGTC
TCAGTTGAACGATTATAGACCCGTGTGCTAATAGTAATATGTAGGCTGAC
AAgctgcaaaatcaaaacattgaaatattcAGTTTCAAGCAGCCACACTG
GTTGANCCACACTGGTTGACTTTGAAGAAGATTTGAGCAGATTCAACTGG
TTTTTATGGTCGAAATCAATGCAGAATGAACTTTTATATTTTGTGTAATG
TTTTGGCTTCAAATTGTTTGTAAAGAGTAACTCATTCTATCACACAATAT
CCATGNTGGCTTCAAATTGTTTGTAAAGAGTAACTCATTCTATCACACAA
TATCCATGGGGGTTGAATTGGTATACGTCAGACGTCGCCCACATTTTTGT
CAGATGAAAAGACATTTGTAACATGTCTCATAATCCAGTTTTCAAGTCAC
AACAAGGCTAACTAAATCTCTTTTGTATCATTCTGAAAGAACACTCAATT
TGCATACAAAGTGTCTCTCATTGGACTACCCAAGCTCTTGTGGTGTGGTT
CAAAGTTTTCGTATATAATTAAACATTTCGTGACGACAAAGACCAGGCTG
CACAAGGCGTCTCTATGACCANTTCAAACATTTCGTGACGACAAAGACCA
GGCTGCACAAGGCGTCTCTATGACCATAATTATAAATGACTAGCACTTGG
ATTTATCACTGATTTACTTGCTCAAATCACATACAATGGCCTTTGTTTAC
AACAGAAAGGTTATTTGACCAATTTCATCTCATGGATATTTCAGATTTTC
AAGCTACCGCATGACACCCTGAATGGACGTAGCATAGCTCACGTTATTGC
CGTACatggttaaaatttgaaaatggacaTATTAACTGGCCAATTCCTAG
CaagacatcattaaatataCTTAGAATGTCTAGTTTCATGATTTTGAACC
CTTGAAATAGACTCATAAGAAGAATTTCATGTCATGAAACTGATAGTAGA
TTTATTACAGTTTTATACCATTTTCTGTCATTTTACGCGTTCACcgaaat
atcaatattttcagtttttgtaaagCCTTAggtctgaaattttcagcatt
TGATTATATTGTATATAAGAGCA Run BLAST on NCBI transcript from alignment at sc0004375:1670..2842 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043596 ID=TCONS_00043596|Name=TCONS_00043596|organism=Clytia hemisphaerica|type=transcript|length=1173bp|location=Sequence derived from alignment at sc0004375:1670..2842 (Clytia hemisphaerica)
TGCTCTTATATACAATATAATCAaatgctgaaaatttcagaccTAAGGct
ttacaaaaactgaaaatattgatatttcgGTGAACGCGTAAAATGACAGA
AAATGGTATAAAACTGTAATAAATCTACTATCAGTTTCATGACATGAAAT
TCTTCTTATGAGTCTATTTCAAGGGTTCAAAATCATGAAACTAGACATTC
TAAGtatatttaatgatgtcttGCTAGGAATTGGCCAGTTAATAtgtcca
ttttcaaattttaaccatGTACGGCAATAACGTGAGCTATGCTACGTCCA
TTCAGGGTGTCATGCGGTAGCTTGAAAATCTGAAATATCCATGAGATGAA
ATTGGTCAAATAACCTTTCTGTTGTAAACAAAGGCCATTGTATGTGATTT
GAGCAAGTAAATCAGTGATAAATCCAAGTGCTAGTCATTTATAATTATGG
TCATAGAGACGCCTTGTGCAGCCTGGTCTTTGTCGTCACGAAATGTTTGA
ANTGGTCATAGAGACGCCTTGTGCAGCCTGGTCTTTGTCGTCACGAAATG
TTTAATTATATACGAAAACTTTGAACCACACCACAAGAGCTTGGGTAGTC
CAATGAGAGACACTTTGTATGCAAATTGAGTGTTCTTTCAGAATGATACA
AAAGAGATTTAGTTAGCCTTGTTGTGACTTGAAAACTGGATTATGAGACA
TGTTACAAATGTCTTTTCATCTGACAAAAATGTGGGCGACGTCTGACGTA
TACCAATTCAACCCCCATGGATATTGTGTGATAGAATGAGTTACTCTTTA
CAAACAATTTGAAGCCANCATGGATATTGTGTGATAGAATGAGTTACTCT
TTACAAACAATTTGAAGCCAAAACATTACACAAAATATAAAAGTTCATTC
TGCATTGATTTCGACCATAAAAACCAGTTGAATCTGCTCAAATCTTCTTC
AAAGTCAACCAGTGTGGNTCAACCAGTGTGGCTGCTTGAAACTgaatatt
tcaatgttttgattttgcagcTTGTCAGCCTACATATTACTATTAGCACA
CGGGTCTATAATCGTTCAACTGAGACTTTTCCGTCACTAATAACATAAGT
TCACCTGTACATATAAAAATCACGGGTTTTTATAGCCTAGAAACTCTGTT
TTTCTCAATAATTTAATGGGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043596-exon-sc0004375-1491911889:1670..2842 | TCONS_00043596-exon-sc0004375-1491911889:1670..2842 | Clytia hemisphaerica | exon |
| TCONS_00043596-exon-sc0004375-1510915933:1670..2842 | TCONS_00043596-exon-sc0004375-1510915933:1670..2842 | Clytia hemisphaerica | exon |
| TCONS_00043596-exon-sc0004375-1575043694:1670..2842 | TCONS_00043596-exon-sc0004375-1575043694:1670..2842 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004375 | supercontig | sc0004375:1670..2842 . |
Blast
The following BLAST results are available for this feature:
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