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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043611 ID=TCONS_00043611|Name=TCONS_00043611|organism=Clytia hemisphaerica|type=transcript|length=1396bp
cacaggtagtacatgacaaatttttttctcaaacaccttcccaccccagg
atacatgccaccttctggtacactgacccccccctgCACAAACAAGGAAC
TTCACACTTCTCAAGAGGGCCAGGTTGATCACAACCCTGTCTGTGCTGTC
TTTGCTGGATTTCACAGCATCTAccattcttttttgtttttatttgctta
aacttaaacttttcactaattcttaatggagttaatttttttatctgtct
gCCTCGGCCAATAATGACCAGGTCCAGTTTTGTCAAGttacaaaactgtt
aaaataaaaacaatgatatacgGCCAATGTAAGACAGATCTAGGTCGATA
TGGACCGGTCCAGGCCGACACAACCGGTCCAAAACTNCAATGATATTCGG
CCAATGTAAGACAGATCTAGGTCGATATGGACCGGTCCAGGCCGATACAA
CCGGTCCAAAACGTTTTATGGAAGCCGAAATACTCATTAtaagcaaaatt
gttttcataCAGTTTTTTCATTGTAAATGACATACTCCCTCGTATTTCAT
AACCTTGACTCACTCGCTCTTATGAATACATTTCAGCCCtgtgaattcag
acaaaatcataTCGGCACTTAAGTGCCGACCAAAACCGGCCATaggccgg
caaaattttgctgacctagaggtcattttaggtcggcaaagccgtcctaa
gtagcttgtttaggtcggcaaagacaAAATAGGAAGAAAATTAACGAACT
ATGAAATTCAGCTGCTCTATAATTGTGTTattaagttttatgttttataa
agagaatggaatggGGCTCGATTATCATGagttatcaaatgataacacaa
ttagattaacctaacaaataatatttttcctctttaggtcggctttgccg
acccaaaacatttcttttgtcggCACGCCGACCTTGAGTGTAAATTATGT
CGGCAAATAAAAGCCGACTTCAGCTCAAGTTACGTCGGCTTTCAAGTCGG
CattgccgaatgccgacctggaTTCACAGGGCTGACATTTAGAAAACATT
GTTAGAAATCCTCCTTAGAATAGAACTACATTATGTCCGTTCGTTAGTTT
ATTTGGGCATCCCTGTATCATTTACATATTCAGACGGTGTTAATCGAATG
AATCAAACGGTgaatcaattgaatgcaatccaacacaatcaaatattatt
acccaggatttgccttTCGATTGAAAGATTACAttcaattgattcaattg
tattttattttaatcACTCTCGTACCGTACTTAGGCGCTAAGTTGTCCAC
cctaaaaaagctctaaaggagtgaTCAAATTTAATTCAATTACATCAATT
GAAGGTAATTTACAATAATTGAACCAATCGAAGGTTACTCAACACA Run BLAST on NCBI transcript from alignment at sc0004393:5797..7192- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043611 ID=TCONS_00043611|Name=TCONS_00043611|organism=Clytia hemisphaerica|type=transcript|length=1396bp|location=Sequence derived from alignment at sc0004393:5797..7192- (Clytia hemisphaerica)
CACAGGTAGTACATGACAAATTTTTTTCTCAAACACCTTCCCACCCCAGG
ATACATGCCACCTTCTGGTACACTGACCCCCCCCTGCACAAACAAGGAAC
TTCACACTTCTCAAGAGGGCCAGGTTGATCACAACCCTGTCTGTGCTGTC
TTTGCTGGATTTCACAGCATCTACCATTCTTTTTTGTTTTTATTTGCTTA
AACTTAAACTTTTCACTAATTCTTAATGGAGTTAATTTTTTTATCTGTCT
GCCTCGGCCAATAATGACCAGGTCCAGTTTTGTCAAGTTACAAAACTGTT
AAAATAAAAACAATGATATACGGCCAATGTAAGACAGATCTAGGTCGATA
TGGACCGGTCCAGGCCGACACAACCGGTCCAAAACTNCAATGATATTCGG
CCAATGTAAGACAGATCTAGGTCGATATGGACCGGTCCAGGCCGATACAA
CCGGTCCAAAACGTTTTATGGAAGCCGAAATACTCATTATAAGCAAAATT
GTTTTCATACAGTTTTTTCATTGTAAATGACATACTCCCTCGTATTTCAT
AACCTTGACTCACTCGCTCTTATGAATACATTTCAGCCCTGTGAATTCAG
ACAAAATCATATCGGCACTTAAGTGCCGACCAAAACCGGCCATAGGCCGG
CAAAATTTTGCTGACCTAGAGGTCATTTTAGGTCGGCAAAGCCGTCCTAA
GTAGCTTGTTTAGGTCGGCAAAGACAAAATAGGAAGAAAATTAACGAACT
ATGAAATTCAGCTGCTCTATAATTGTGTTATTAAGTTTTATGTTTTATAA
AGAGAATGGAATGGGGCTCGATTATCATGAGTTATCAAATGATAACACAA
TTAGATTAACCTAACAAATAATATTTTTCCTCTTTAGGTCGGCTTTGCCG
ACCCAAAACATTTCTTTTGTCGGCACGCCGACCTTGAGTGTAAATTATGT
CGGCAAATAAAAGCCGACTTCAGCTCAAGTTACGTCGGCTTTCAAGTCGG
CATTGCCGAATGCCGACCTGGATTCACAGGGCTGACATTTAGAAAACATT
GTTAGAAATCCTCCTTAGAATAGAACTACATTATGTCCGTTCGTTAGTTT
ATTTGGGCATCCCTGTATCATTTACATATTCAGACGGTGTTAATCGAATG
AATCAAACGGTGAATCAATTGAATGCAATCCAACACAATCAAATATTATT
ACCCAGGATTTGCCTTTCGATTGAAAGATTACATTCAATTGATTCAATTG
TATTTTATTTTAATCACTCTCGTACCGTACTTAGGCGCTAAGTTGTCCAC
CCTAAAAAAGCTCTAAAGGAGTGATCAAATTTAATTCAATTACATCAATT
GAAGGTAATTTACAATAATTGAACCAATCGAAGGTTACTCAACACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043611-exon-sc0004393-1575043694:5797..7192 | TCONS_00043611-exon-sc0004393-1575043694:5797..7192 | Clytia hemisphaerica | exon |
| TCONS_00043611-exon-sc0004393-1510915933:5797..7192 | TCONS_00043611-exon-sc0004393-1510915933:5797..7192 | Clytia hemisphaerica | exon |
| TCONS_00043611-exon-sc0004393-1491911889:5797..7192 | TCONS_00043611-exon-sc0004393-1491911889:5797..7192 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004393 | supercontig | sc0004393:5797..7192 - |
Blast
The following BLAST results are available for this feature:
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