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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043656 ID=TCONS_00043656|Name=TCONS_00043656|organism=Clytia hemisphaerica|type=transcript|length=785bp
GAAAATGTTTTAGCAGTCCTAGggatttgttgttttgttttctctGCAAT
AGACCCATAGAAATTGTTGAAAACTTCAGCCATGTCTTTGTCATTGTTAA
TATGTACATTGTCTTGAAGAATAAGTTTTGGGGAAGGATCTGTGGATGAT
TTTACACCTATTATTTCATTTACAGCCTTCCACTTTTTTTTGAGATCATT
ACTATGTTcagaaaaaaaggttttgtaaTATAAGTTTTTGCTAGCTCGCA
GCAATTTAGCAAGTAAATTTCTGTGTTTTTTGAACTTGTCATGCTTTAGT
GCTTTAAGGGTTTGATCTTTTGCCTTCATAaatttcttatataatttgtt
tttggAAGAGATTGATTTGAGGAGACCTTTTGTGATCCAGGGTTTTTTTG
GTATGCATGCCTTCTTCCAAGTAGTTTTTATAGGGGCATGTGAATCTATA
ACCGAATTGGTTTTAGTAATAAAAGTATTGAGCTTGTCAGAAGGAGATTT
CCCATGAAGAGTAGTTGCCCAGTCGATGGAGAGAAAATCCATCAAGAAAT
CGTTTCTGGTGAAATTTTNCAgcaattgaagaagaagaaaataaagaaga
agagGTCAAGGAAGATGAGCCAAAACTTGTGAAAAAGAGAAAAGGAAAGA
AAGATGTGGCTGCCAAAATGAAGAATTTAGAACTGGGTGAGGATAGAGGT
GCTGAACAATGTTTCGATTACGACAGCGAAGAAGAAACCGAAGAACCAGA
TGATGCTGCTGAAACTGAAGATACTGGGGGTAAAT Run BLAST on NCBI transcript from alignment at sc0004442:742..1925- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043656 ID=TCONS_00043656|Name=TCONS_00043656|organism=Clytia hemisphaerica|type=transcript|length=1184bp|location=Sequence derived from alignment at sc0004442:742..1925- (Clytia hemisphaerica)
GAAAATGTTTTAGCAGTCCTAGGGATTTGTTGTTTTGTTTTCTCTGCAAT
AGACCCATAGAAATTGTTGAAAACTTCAGCCATGTCTTTGTCATTGTTAA
TATGTACATTGTCTTGAAGAATAAGTTTTGGGGAAGGATCTGTGGATGAT
TTTACACCTATTATTTCATTTACAGCCTTCCACTTTTTTTTGAGATCATT
ACTATGTTCAGAAAAAAAGGTTTTGTAATATAAGTTTTTGCTAGCTCGCA
GCAATTTAGCAAGTAAATTTCTGTGTTTTTTGAACTTGTCATGCTTTAGT
GCTTTAAGGGTTTGATCTTTTGCCTTCATAAATTTCTTATATAATTTGTT
TTTGGAAGAGATTGATTTGAGGAGACCTTTTGTGATCCAGGGTTTTTTTG
GTATGCATGCCTTCTTCCAAGTAGTTTTTATAGGGGCATGTGAATCTATA
ACCGAATTGGTTTTAGTAATAAAAGTATTGAGCTTGTCAGAAGGAGATTT
CCCATGAAGAGTAGTTGCCCAGTCGATGGAGAGAAAATCCATCAAGAAAT
CGTTTCTGGTGAAATTTTNCAGCAATTGAAGAAGAAGAAAATAAAGAAGA
AGAGGTCAAGGAAGATGAGCCAAAACTTGTGAAAAAGAGAAAAGGTTGGT
TCAAACAGCACACAATGTGTAGAAATCTGTTTCAGCATGTTTCATGTTTT
TAATCATTCCCCATTTTGAATCTATTCTTCATCTTACTTCAATTTGTTCA
TGGTTCTTCTGTCTAAGTTACAAAAATGAAAATGTAAAAGTAAAAATTGT
TGAATATATTACAAATTCACAAAAATAAAAATTACAAATTAACAGGACTG
GCTTGAGAGTAAAGAGGAGGATAGGATTAAGGTATGGGAGACCTGTTGGG
AGGAAGTATTTGAAGAAAAAAAAATGAAAAAAAATTTTAGTCTATCACTT
TTTTAATATAAAAAAATATTAGGAATTTATATTTTTATTATTTCTTACAC
ATTAATTACCTGTATTTACTGTCTGTATTTATGTTGCTTTTAGGAAAGAA
AGATGTGGCTGCCAAAATGAAGAATTTAGAACTGGGTGAGGATAGAGGTG
CTGAACAATGTTTCGATTACGACAGCGAAGAAGAAACCGAAGAACCAGAT
GATGCTGCTGAAACTGAAGATACTGGGGGTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043656-exon-sc0004442-1575043694:1282..1925 | TCONS_00043656-exon-sc0004442-1575043694:1282..1925 | Clytia hemisphaerica | exon |
| TCONS_00043656-exon-sc0004442-1575043694:742..882 | TCONS_00043656-exon-sc0004442-1575043694:742..882 | Clytia hemisphaerica | exon |
| TCONS_00043656-exon-sc0004442-1510915933:1282..1925 | TCONS_00043656-exon-sc0004442-1510915933:1282..1925 | Clytia hemisphaerica | exon |
| TCONS_00043656-exon-sc0004442-1510915933:742..882 | TCONS_00043656-exon-sc0004442-1510915933:742..882 | Clytia hemisphaerica | exon |
| TCONS_00043656-exon-sc0004442-1491911889:1282..1925 | TCONS_00043656-exon-sc0004442-1491911889:1282..1925 | Clytia hemisphaerica | exon |
| TCONS_00043656-exon-sc0004442-1491911889:742..882 | TCONS_00043656-exon-sc0004442-1491911889:742..882 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004442 | supercontig | sc0004442:742..1925 - |
Blast
The following BLAST results are available for this feature:
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