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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043730 ID=TCONS_00043730|Name=TCONS_00043730|organism=Clytia hemisphaerica|type=transcript|length=996bp
GATTGAattcgattgttatcgattaAGATCAATTGCGATCGATTGTGCTA
AAATTAGACaggaaagttttatttttgaaaaacttctttctttcaaaaac
acaaattaAAGGGANTTCAAAAACACAAATTAAAGGGATCTTCGTCATCC
TCCTCTGGCTCCTCCAAATCAGCTAATGCTTGTTAATACATTATACGATC
TATATGTAATATATATTACAGAAGCCTTTAACGCGTACTTAAAACACTTA
ATATCGTAATTAATTGTTCTCTAGTTTTTCACACGTAGtgtcaaaaataa
ttatttattgccacgcgttaaattagaaaaaccacggTAGGGTTGCGTTT
TTAGCGAATATAAAGaaatcgatattaatcgataataatcgaaaGCAATC
AGCGATTAATCGATAGCAATCGATAACAATCAAATCCAATCGATAAGAAC
GTAAAGTCTTAGTATCGATTGGctatcgattgtttatcgattacttatcg
atcactATCGATTATTATTGATAAAaatcgattaatatcgattgATTTCC
CGTATCGATTTCATCGATTGGGTACGCCTGGATATCTTTAAATAAGCATG
tcgaaattagaggagggatgtcgaaattagaccaacttacggtaataaAC
CCACCCACCCCACATAATGTCATTCACAAAAATCTGGTACTatgcttctt
tttcttcagtCAAGACCAACACCAACTCATGCTCAACACTCAACGTCATC
ACCATTTTCGACTAGAGTGTTGTGACCAACCCACCCACAAACTGACAAAA
CGTCATATGATGTTATTTGAACTTAAAATTgatttgtgagtgacccctaa
actctcttgcatcaaattcccactttttttccaaaaattgaagatgagaa
agcCTTAAGATCACGAATAAAACAAATTTATGAAAGGTGAGATCTTACAG
CCGCAATCtactcattggtggaaatttgataaactgtCGCAAAGGA Run BLAST on NCBI transcript from alignment at sc0004513:204..1199 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043730 ID=TCONS_00043730|Name=TCONS_00043730|organism=Clytia hemisphaerica|type=transcript|length=996bp|location=Sequence derived from alignment at sc0004513:204..1199 (Clytia hemisphaerica)
TCCTTTGCGacagtttatcaaatttccaccaatgagtaGATTGCGGCTGT
AAGATCTCACCTTTCATAAATTTGTTTTATTCGTGATCTTAAGgctttct
catcttcaatttttggaaaaaaagtgggaatttgatgcaagagagtttag
gggtcactcacaaatcAATTTTAAGTTCAAATAACATCATATGACGTTTT
GTCAGTTTGTGGGTGGGTTGGTCACAACACTCTAGTCGAAAATGGTGATG
ACGTTGAGTGTTGAGCATGAGTTGGTGTTGGTCTTGactgaagaaaaaga
agcatAGTACCAGATTTTTGTGAATGACATTATGTGGGGTGGGTGGGTtt
attaccgtaagttggtctaatttcgacatccctcctctaatttcgaCATG
CTTATTTAAAGATATCCAGGCGTACCCAATCGATGAAATCGATACGGGAA
ATcaatcgatattaatcgattTTTATCAATAATAATCGATagtgatcgat
aagtaatcgataaacaatcgatagCCAATCGATACTAAGACTTTACGTTC
TTATCGATTGGATTTGATTGTTATCGATTGCTATCGATTAATCGCTGATT
GCtttcgattattatcgattaatatcgatttCTTTATATTCGCTAAAAAC
GCAACCCTAccgtggtttttctaatttaacgcgtggcaataaataattat
ttttgacaCTACGTGTGAAAAACTAGAGAACAATTAATTACGATATTAAG
TGTTTTAAGTACGCGTTAAAGGCTTCTGTAATATATATTACATATAGATC
GTATAATGTATTAACAAGCATTAGCTGATTTGGAGGAGCCAGAGGAGGAT
GACGAAGATCCCTTTAATTTGTGTTTTTGAANTCCCTTtaatttgtgttt
ttgaaagaaagaagtttttcaaaaataaaactttcctGTCTAATTTTAGC
ACAATCGATCGCAATTGATCTtaatcgataacaatcgaatTCAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043730-exon-sc0004513-1491911889:204..1199 | TCONS_00043730-exon-sc0004513-1491911889:204..1199 | Clytia hemisphaerica | exon |
| TCONS_00043730-exon-sc0004513-1510915933:204..1199 | TCONS_00043730-exon-sc0004513-1510915933:204..1199 | Clytia hemisphaerica | exon |
| TCONS_00043730-exon-sc0004513-1575043694:204..1199 | TCONS_00043730-exon-sc0004513-1575043694:204..1199 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004513 | supercontig | sc0004513:204..1199 . |
Blast
The following BLAST results are available for this feature:
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