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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043904 ID=TCONS_00043904|Name=TCONS_00043904|organism=Clytia hemisphaerica|type=transcript|length=1071bp
TATAGCGTTTACCACAAACTTCACACTTGTAATTTTTGTTACCCTCGTGA
ACTTTACGATGTCTCGATAGATAGACACTGTTTGCAAATGACTTACCACA
TTTCTCGCATTCAAGAGGTTGGAGATCTGTGTGAATACTTACGTGAACAT
TAAATCTGTATTTAGAAGGAAACTCTTTTTTGCAAGTTTgacatttgaat
tttttaatttttttttggtgttttttaatTTGGTGTGATTTAAGATCTCC
TCTTTGAGTAAATCTCTCTCCACATTTTTTACATTTATATTCTTttaatt
tgtgttttcccttatgCAAAGTGAGTTCTGTGGATGTGAACGACTCACCA
CATTCTTGATATTCAATTAATTTGTCAACCTCTTCCTGGATAGTATTTTT
CGNCACATTCTTGATATTCAATTAATTTGTCAACCTCTTCCTGGATACTA
TTTTTATGTAATTGCTTTGAGCTTTCATTTCCAGTTTGAAGGTCTTTTAA
TCGGTTAAAATCGTTACATTGTTCTAAAGATTTTGGGGAGGCTTCATATG
TTTTTGTATCGATTTGAATTTCAACGTCTGCACTtatttcttctttaatt
ttgatgGCACTTTCTTCACCAATTCTAATCTTAAATTTTTGCTCGTGAAC
ATTTCTCTCGATATTTTTAATGTTATTTTCAACATCATAATGAAGCTTGT
CATAATATTGGATTTCAACATCTGTACTTATTTCTTCTTTGACTTTGATG
GTATTTTCTTCACCGATTCTAATTCTAAATTTCTCCTCGTGCACATTTTT
CTCGatatttttaatgcttttttccACGTCATCATTGTGAATCTCACCAG
GATGCTTCgggcaaaacaaaaatttgttaccAACTCCATCAGCAAATTGC
AATTGATGAAATATATCTTGTATCCAAATATTACATGTACCAATCACACC
ATCTTCCATTTGAACATCAAATAAAAGGCTGACTGCTGATTCAGCGTTAT
TCTCATACTGATAATTTTCAATCTTAATGTTCATCTTTGTTTATTTCAAG
TAGTTCTCTTGTCTTTTGTCt Run BLAST on NCBI transcript from alignment at sc0004714:4638..5708- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043904 ID=TCONS_00043904|Name=TCONS_00043904|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at sc0004714:4638..5708- (Clytia hemisphaerica)
TATAGCGTTTACCACAAACTTCACACTTGTAATTTTTGTTACCCTCGTGA
ACTTTACGATGTCTCGATAGATAGACACTGTTTGCAAATGACTTACCACA
TTTCTCGCATTCAAGAGGTTGGAGATCTGTGTGAATACTTACGTGAACAT
TAAATCTGTATTTAGAAGGAAACTCTTTTTTGCAAGTTTGACATTTGAAT
TTTTTAATTTTTTTTTGGTGTTTTTTAATTTGGTGTGATTTAAGATCTCC
TCTTTGAGTAAATCTCTCTCCACATTTTTTACATTTATATTCTTTTAATT
TGTGTTTTCCCTTATGCAAAGTGAGTTCTGTGGATGTGAACGACTCACCA
CATTCTTGATATTCAATTAATTTGTCAACCTCTTCCTGGATAGTATTTTT
CGNCACATTCTTGATATTCAATTAATTTGTCAACCTCTTCCTGGATACTA
TTTTTATGTAATTGCTTTGAGCTTTCATTTCCAGTTTGAAGGTCTTTTAA
TCGGTTAAAATCGTTACATTGTTCTAAAGATTTTGGGGAGGCTTCATATG
TTTTTGTATCGATTTGAATTTCAACGTCTGCACTTATTTCTTCTTTAATT
TTGATGGCACTTTCTTCACCAATTCTAATCTTAAATTTTTGCTCGTGAAC
ATTTCTCTCGATATTTTTAATGTTATTTTCAACATCATAATGAAGCTTGT
CATAATATTGGATTTCAACATCTGTACTTATTTCTTCTTTGACTTTGATG
GTATTTTCTTCACCGATTCTAATTCTAAATTTCTCCTCGTGCACATTTTT
CTCGATATTTTTAATGCTTTTTTCCACGTCATCATTGTGAATCTCACCAG
GATGCTTCGGGCAAAACAAAAATTTGTTACCAACTCCATCAGCAAATTGC
AATTGATGAAATATATCTTGTATCCAAATATTACATGTACCAATCACACC
ATCTTCCATTTGAACATCAAATAAAAGGCTGACTGCTGATTCAGCGTTAT
TCTCATACTGATAATTTTCAATCTTAATGTTCATCTTTGTTTATTTCAAG
TAGTTCTCTTGTCTTTTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043904-exon-sc0004714-1575043694:4638..5708 | TCONS_00043904-exon-sc0004714-1575043694:4638..5708 | Clytia hemisphaerica | exon |
| TCONS_00043904-exon-sc0004714-1510915933:4638..5708 | TCONS_00043904-exon-sc0004714-1510915933:4638..5708 | Clytia hemisphaerica | exon |
| TCONS_00043904-exon-sc0004714-1491911889:4638..5708 | TCONS_00043904-exon-sc0004714-1491911889:4638..5708 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004714 | supercontig | sc0004714:4638..5708 - |
Blast
The following BLAST results are available for this feature:
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