|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043908 ID=TCONS_00043908|Name=TCONS_00043908|organism=Clytia hemisphaerica|type=transcript|length=842bp
TGAAAGCTGAcatttacagaaagaaaaatagcagttgtaaaagaaaacaa
atcgTGTAAATTGCTTGACAGTAAATTGtgtaaaagaaacaaaatatcAC
CAGTTGGAGTGTCGGTGTGGACAAGTTGAGAATAATGGTGAAATATTGCA
TGCCAATGATATGGAAAAGAAACTGGCCAAACTGGCCATGGTGTGCAGGG
AtttttttcagtgttttcatTGCATGGCGGAGGTTATTGGCTGTATAGGT
CCACCACATTTGATAATTTTCCAACTGGCAATGTCATCTGATGTCATCAG
TCATTTGAGACAAGTATAttgattgaaaatttctaaaataaacttGCCAA
TTTATTGGTAATAGAATTTCTTGAGAAAGAAGACTTGGACTCACTCAGGA
TTTTGGAGAACAAATTGGaatattttaatcaatttttactattttggcac
taaaatttatattttttttagaatgagTAATTTTCTAATCATTAACATTT
TTGtcatttgtattgtctttttcaAGAGGATAAATTAATCTTGTGTCTCT
CTGTAAACAGTTCAAAGTGTGATGTATGTCTTTACAAGTGCAAATCAAAG
TCCATTGACAGTCATTTTGTaggtcaaaattttcaagttttaaaaatgCT
ATGGAAATTTTACGAAAAAGTTTCTCAGGATCAATATTTCTACTGGTTCA
AACATTTCTCCAAAATTTTAGAGGGTGATTCCATTCCTATCAAAGGTTGT
TTTCATAGTAAAGGGTGTTTAAATTGCTTTTGATCAAAAAGGTATGTCAA
CCTCATGGGTAAAAGCATGTAATGTAAATTATTAAAATGATC Run BLAST on NCBI transcript from alignment at sc0004718:2003..3375- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043908 ID=TCONS_00043908|Name=TCONS_00043908|organism=Clytia hemisphaerica|type=transcript|length=1373bp|location=Sequence derived from alignment at sc0004718:2003..3375- (Clytia hemisphaerica)
TGAAAGCTGACATTTACAGAAAGAAAAATAGCAGTTGTAAAAGAAAACAA
ATCGTGTAAATTGCTTGACAGTAAATTGTGTAAAAGAAACAAAATATCAC
CAGTTGGAGTGTCGTAGGTATTTTCCTTGATATTTTTGAACTGTATCTCA
TTTTCTTTGTGAAGTTTCTCCTGATTCCACTATGATCTTGCTATGTGCCA
ATGATTAAAAGCATTACAATCACAGTCATTTTGCAGTTCAAAAAGGACTT
CTGGTAGTCTGAGGACTTTTCTCGTTGTTTGAGAGTTCTGCAATCTAGTC
AACACAGTTCTCTATTTCATCCCTTTAACAACCCACTGTATGACCCAAAC
ATACGAACATACCTAGATTTTTGCCTTCAAAAACATGTCCTGGGCAGCCA
GTTTGGGTCGTACTTGGAATTTTATTATGTACTAAATCGCTGAGCGTGCG
GGAAAAATTCAGGCAAAGCTGTTAGTCGTTCTTCTAAACAATTGTTAAAA
ACTATTACAAACAGTAAAAATTCTAAGTATCGTTGCGCTTTAAATGAGAA
CCATTTAAATAATTTTTATGGCTGGAACAGCAAGCATCGCCTTCCTGCCT
AGCTTCAAAAAATTTTTCCTCTAAAAAGTCAACTGGAATCCTAGGGTGTG
GACAAGTTGAGAATAATGGTGAAATATTGCATGCCAATGATATGGAAAAG
AAACTGGCCAAACTGGCCATGGTGTGCAGGGATTTTTTTCAGTGTTTTCA
TTGCATGGCGGAGGTTATTGGCTGTATAGGTCCACCACATTTGATAATTT
TCCAACTGGCAATGTCATCTGATGTCATCAGTCATTTGAGACAAGTATAT
TGATTGAAAATTTCTAAAATAAACTTGCCAATTTATTGGTAATAGAATTT
CTTGAGAAAGAAGACTTGGACTCACTCAGGATTTTGGAGAACAAATTGGA
ATATTTTAATCAATTTTTACTATTTTGGCACTAAAATTTATATTTTTTTT
AGAATGAGTAATTTTCTAATCATTAACATTTTTGTCATTTGTATTGTCTT
TTTCAAGAGGATAAATTAATCTTGTGTCTCTCTGTAAACAGTTCAAAGTG
TGATGTATGTCTTTACAAGTGCAAATCAAAGTCCATTGACAGTCATTTTG
TAGGTCAAAATTTTCAAGTTTTAAAAATGCTATGGAAATTTTACGAAAAA
GTTTCTCAGGATCAATATTTCTACTGGTTCAAACATTTCTCCAAAATTTT
AGAGGGTGATTCCATTCCTATCAAAGGTTGTTTTCATAGTAAAGGGTGTT
TAAATTGCTTTTGATCAAAAAGGTATGTCAACCTCATGGGTAAAAGCATG
TAATGTAAATTATTAAAATGATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043908-exon-sc0004718-1575043694:3263..3375 | TCONS_00043908-exon-sc0004718-1575043694:3263..3375 | Clytia hemisphaerica | exon |
| TCONS_00043908-exon-sc0004718-1575043694:2003..2731 | TCONS_00043908-exon-sc0004718-1575043694:2003..2731 | Clytia hemisphaerica | exon |
| TCONS_00043908-exon-sc0004718-1510915933:3263..3375 | TCONS_00043908-exon-sc0004718-1510915933:3263..3375 | Clytia hemisphaerica | exon |
| TCONS_00043908-exon-sc0004718-1510915933:2003..2731 | TCONS_00043908-exon-sc0004718-1510915933:2003..2731 | Clytia hemisphaerica | exon |
| TCONS_00043908-exon-sc0004718-1491911889:3263..3375 | TCONS_00043908-exon-sc0004718-1491911889:3263..3375 | Clytia hemisphaerica | exon |
| TCONS_00043908-exon-sc0004718-1491911889:2003..2731 | TCONS_00043908-exon-sc0004718-1491911889:2003..2731 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004718 | supercontig | sc0004718:2003..3375 - |
Blast
The following BLAST results are available for this feature:
|
