TCONS_00043914 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043914
Unique NameTCONS_00043914
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043914 ID=TCONS_00043914|Name=TCONS_00043914|organism=Clytia hemisphaerica|type=transcript|length=189bp
CAAATTTGTTGGATGTGTATATTtctgaatatatattttttaatatatag
GAACATTTCAATCTTTATTGGATTCAACATCCATGGGAAAAAGGAAAGAT
CACAGTTTTATTATCAGTGACAACttatttcaattcttcaaaGTACTACA
CCACAAGAAGAAATGATaactttctttaaaatgttgcaa
Run BLAST on NCBI

transcript from alignment at sc0004726:10114..10617+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043914 ID=TCONS_00043914|Name=TCONS_00043914|organism=Clytia hemisphaerica|type=transcript|length=504bp|location=Sequence derived from alignment at sc0004726:10114..10617+ (Clytia hemisphaerica)
CAAATTTGTTGGATGTGTATATTtctgaatatatattttttaatatatag
GAACATTTCAATCTTTATTGGATTCAACATCCATGGGAAAAAGGAAAGAT
CACAGTTTTATGTAAGTGAATATAAATGAAgtcatttttaaaatattaga
AGAATAGTTATAATTCCATTTCAAAAAAGAGTAATTGAGATTTATTTGtt
gtatttattgtttttattatgaACAGAAAATGGTTGAGAtatctcttttt
tattttcatttttttatattgcTGCCTTTGAATTAATATGCAAATGGTTG
AATAGaaaaggaattttttgatttagtGAGAGGAAATTAATTAGAGGTTG
GTAATTTTGTCTCATCTTCAGTTATCTCTTCAAAAAGTACCATAATGAAT
ATTCATTCCCTCTTTTTCAATCTCAGTATCAGTGACAACttatttcaatt
cttcaaaGTACTACACCACAAGAAGAAATGATaactttctttaaaatgtt
gcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027581XLOC_027581Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043914-exon-sc0004726-1491911889:10114..10224TCONS_00043914-exon-sc0004726-1491911889:10114..10224Clytia hemisphaericaexon
TCONS_00043914-exon-sc0004726-1510915933:10114..10224TCONS_00043914-exon-sc0004726-1510915933:10114..10224Clytia hemisphaericaexon
TCONS_00043914-exon-sc0004726-1575043694:10114..10224TCONS_00043914-exon-sc0004726-1575043694:10114..10224Clytia hemisphaericaexon
TCONS_00043914-exon-sc0004726-1491911889:10540..10617TCONS_00043914-exon-sc0004726-1491911889:10540..10617Clytia hemisphaericaexon
TCONS_00043914-exon-sc0004726-1510915933:10540..10617TCONS_00043914-exon-sc0004726-1510915933:10540..10617Clytia hemisphaericaexon
TCONS_00043914-exon-sc0004726-1575043694:10540..10617TCONS_00043914-exon-sc0004726-1575043694:10540..10617Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004726supercontigsc0004726:10114..10617 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043914 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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