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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044028 ID=TCONS_00044028|Name=TCONS_00044028|organism=Clytia hemisphaerica|type=transcript|length=253bp
ACTGGTAGCCCAGCGTCATTACCAAAGAAACAGGCTGACCCTAAAGAGAT
TGCAAGATAAAAGAACTCAATGGAACGAACAACTCCCAAACTTTCaaaca
aatttcaatttctCGGCTGCTGCATTGATGCAACCGTACGTACAACCGCC
TTCAACCAACGTACGTAATCCTACGCCTGCAACGAACGTACATAATCCTA
CGCCTGCAACCAACGTAGAAGCCATTAATAATGAGATTCAGAATATCTGC
cag Run BLAST on NCBI transcript from alignment at sc0004864:3963..4955+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044028 ID=TCONS_00044028|Name=TCONS_00044028|organism=Clytia hemisphaerica|type=transcript|length=993bp|location=Sequence derived from alignment at sc0004864:3963..4955+ (Clytia hemisphaerica)
ACTGGTAGCCCAGCGTCATTACCAAAGAAACAGGCTGACCCTAAAGAGGT
AgaaacaaatttgattttatagTCTTTGAGCTAATGTGTGACAAGGTTAT
AGGAGATTAATTTGCTTTCTTTTCAAGAATATCTACAAAGTGAAATATTA
GAATGAATCTTTTTCCATATTATTTTAGACATCGCATAATTGAGAAAGTT
TCTTAGTAATACTAGAACCACAGTTCGTTACTTAATGTTCGATCAATATA
ATCGATTTTGATCCCTAGATAGGCTCTGAAGGAGGTTTCAATAGTTTTTT
TGTGAAATCGTTTTAGCTATTGTCAAGACAGAATCANCAAGGTTATAGGA
GATTAATTTGCTTTCTTTTCAAGAATATCTACAAAGTGAAATATTAGAAA
GAATCTTTTTCCATATTATTTTAGACATAGCATAATTGAGAAAGTTTCTT
AGTAATACTAGAACCACAGTTCGTTACTTAATGTTCGatcgatataatcg
attttGATCACTAGATAGGCTCTGAAGGAGGTTTCAAtagttttttttgt
gaaatcgTTTTAGCTATTGTCAAGACAGAATCAGCAAGAGCTACTCAGAT
CTGAAACATATCACTATATTTATCTTTTCATTTATAGATTGCAAGATAAA
AGAACTCAATGGAACGAACAACTCCCAAACTTGTGAGTAATGATTATACA
TGAATATCTTAAACAAAGTTAActgaaattaaaatttgttgTTAATTATT
TCATGGCCAGTCTGGGCCAGTTGAGTTTTTCTAGGTTTTAATTAAAGGGG
AAAATGTTCATGATTGTTTTCGCTTTTTTTCAGTCaaacaaatttcaatt
tctCGGCTGCTGCATTGATGCAACCGTACGTACAACCGCCTTCAACCAAC
GTACGTAATCCTACGCCTGCAACGAACGTACATAATCCTACGCCTGCAAC
CAACGTAGAAGCCATTAATAATGAGATTCAGAATATCTGCcag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044028-exon-sc0004864-1491911889:3963..4010 | TCONS_00044028-exon-sc0004864-1491911889:3963..4010 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1510915933:3963..4010 | TCONS_00044028-exon-sc0004864-1510915933:3963..4010 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1575043694:3963..4010 | TCONS_00044028-exon-sc0004864-1575043694:3963..4010 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1491911889:4600..4644 | TCONS_00044028-exon-sc0004864-1491911889:4600..4644 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1510915933:4600..4644 | TCONS_00044028-exon-sc0004864-1510915933:4600..4644 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1575043694:4600..4644 | TCONS_00044028-exon-sc0004864-1575043694:4600..4644 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1491911889:4796..4955 | TCONS_00044028-exon-sc0004864-1491911889:4796..4955 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1510915933:4796..4955 | TCONS_00044028-exon-sc0004864-1510915933:4796..4955 | Clytia hemisphaerica | exon |
| TCONS_00044028-exon-sc0004864-1575043694:4796..4955 | TCONS_00044028-exon-sc0004864-1575043694:4796..4955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004864 | supercontig | sc0004864:3963..4955 + |
Blast
The following BLAST results are available for this feature:
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