TCONS_00044112 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044112
Unique NameTCONS_00044112
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044112 ID=TCONS_00044112|Name=TCONS_00044112|organism=Clytia hemisphaerica|type=transcript|length=176bp
GAcgattttgaagctcttgcagtgTCCTGACTGaaccaatcagataaaaa
tcgGGTTAAAAATCGGGctagaaaatcggaaaaaaaacGGGGAAATAGGA
CTTTTCGATACCGTTTCAGCCAGTCGGGACTTGGTTTATAGCAGTCGCCT
TCGACAGGACATTTGGTGTTTAtggt
Run BLAST on NCBI

transcript from alignment at sc0004989:1771..1946

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044112 ID=TCONS_00044112|Name=TCONS_00044112|organism=Clytia hemisphaerica|type=transcript|length=176bp|location=Sequence derived from alignment at sc0004989:1771..1946 (Clytia hemisphaerica)
accaTAAACACCAAATGTCCTGTCGAAGGCGACTGCTATAAACCAAGTCC
CGACTGGCTGAAACGGTATCGAAAAGTCCTATTTCCCCgttttttttccg
attttctagCCCGATTTTTAACCcgatttttatctgattggttCAGTCAG
GAcactgcaagagcttcaaaatcgTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027759XLOC_027759Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044112-exon-sc0004989-1491911889:1771..1946TCONS_00044112-exon-sc0004989-1491911889:1771..1946Clytia hemisphaericaexon
TCONS_00044112-exon-sc0004989-1510915933:1771..1946TCONS_00044112-exon-sc0004989-1510915933:1771..1946Clytia hemisphaericaexon
TCONS_00044112-exon-sc0004989-1575043694:1771..1946TCONS_00044112-exon-sc0004989-1575043694:1771..1946Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004989supercontigsc0004989:1771..1946 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044112 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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