TCONS_00044217 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044217
Unique NameTCONS_00044217
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length579

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044217 ID=TCONS_00044217|Name=TCONS_00044217|organism=Clytia hemisphaerica|type=transcript|length=579bp
ACCGTTTCTTCTTCGCCTTGAATGCTGATGATGTAATCTCTCACGTTTCA
AACACATGTACGGAATGTCGAGCTTTACAATCAGTTCCGAAAGAGCTTCA
CCAACAATCGTCATCGCAACTACCTGCTACCCCTGGCACCGACTTCGCTG
CTGATANATGATGTAATCTCTCACGTTTCAAACACATGTACGGAATGTCG
AGCTCTACAATCAGTTCCGAAAGAGCTTCACCAACAATCGTCATCGCAAC
TACCTGCTACCCCTGGCACCGACTTCGCTGCTGATGTCGTCCGTCGAGCC
AAACAGATTATCTTTGTCCTACGCGATACCCTTTCGTCCTACACCATAGC
CACCTTATACACAGACGAAAACCAAGACACCATGCTTGAAGCTTTGATTA
CATCAGTGTCACTTCTGCGTCCAACACCTCAAACAGCCGCTATCGTCCGA
GTCGACAATGCACCTGGACTTTACGCCCTTCGTGATAATCTTGTCCTTCA
ACAACATCAAATAACCCTCGACTACGGAAGAGTTAAGAATCCAAACAAGA
ACCCAGTTGCAGAAAAAGCCATCAACGAG
Run BLAST on NCBI

transcript from alignment at sc0005182:32..610

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044217 ID=TCONS_00044217|Name=TCONS_00044217|organism=Clytia hemisphaerica|type=transcript|length=579bp|location=Sequence derived from alignment at sc0005182:32..610 (Clytia hemisphaerica)
CTCGTTGATGGCTTTTTCTGCAACTGGGTTCTTGTTTGGATTCTTAACTC
TTCCGTAGTCGAGGGTTATTTGATGTTGTTGAAGGACAAGATTATCACGA
AGGGCGTAAAGTCCAGGTGCATTGTCGACTCGGACGATAGCGGCTGTTTG
AGGTGTTGGACGCAGAAGTGACACTGATGTAATCAAAGCTTCAAGCATGG
TGTCTTGGTTTTCGTCTGTGTATAAGGTGGCTATGGTGTAGGACGAAAGG
GTATCGCGTAGGACAAAGATAATCTGTTTGGCTCGACGGACGACATCAGC
AGCGAAGTCGGTGCCAGGGGTAGCAGGTAGTTGCGATGACGATTGTTGGT
GAAGCTCTTTCGGAACTGATTGTAGAGCTCGACATTCCGTACATGTGTTT
GAAACGTGAGAGATTACATCATNTATCAGCAGCGAAGTCGGTGCCAGGGG
TAGCAGGTAGTTGCGATGACGATTGTTGGTGAAGCTCTTTCGGAACTGAT
TGTAAAGCTCGACATTCCGTACATGTGTTTGAAACGTGAGAGATTACATC
ATCAGCATTCAAGGCGAAGAAGAAACGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027861XLOC_027861Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044217-exon-sc0005182-1491911889:32..610TCONS_00044217-exon-sc0005182-1491911889:32..610Clytia hemisphaericaexon
TCONS_00044217-exon-sc0005182-1510915933:32..610TCONS_00044217-exon-sc0005182-1510915933:32..610Clytia hemisphaericaexon
TCONS_00044217-exon-sc0005182-1575043694:32..610TCONS_00044217-exon-sc0005182-1575043694:32..610Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005182supercontigsc0005182:32..610 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0958858	0.374015	0.108567	0.212431	0	0.10218	0.123276	0.461639	0.161602	0	0.388581	0.0638594	0.127541	0.264906	0	0	0	0	0.203857	0.106661	0.0927078	0	0	0	0	0.0918789	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044217 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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