TCONS_00044303 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044303
Unique NameTCONS_00044303
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length289

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044303 ID=TCONS_00044303|Name=TCONS_00044303|organism=Clytia hemisphaerica|type=transcript|length=289bp
CAATGATGGCGTTGAAACCAAAACCTCTTTCTTAGATGATTATGCTTCCA
GATATGTTTATGAAGACAATGAGATTAGGCAAAGTAACCTTCAtagattt
tgtttcaaactgGAAAATAAGTGCTAAAGACAAAAAGGTTCAAAAGAGGA
AAAAGGCAGTTGTTGTTCGTACTTTTCCAAACTATAGTCCAAACCCAAAG
AGTGACAGTTATCCTTTATTTTGTAAATTCCAATTGATCAAGTACAAACC
ATGGAATGATTCTGTAGACAGTCTCTGGGAAGGTTTANN
Run BLAST on NCBI

transcript from alignment at sc0005331:4330..4618

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044303 ID=TCONS_00044303|Name=TCONS_00044303|organism=Clytia hemisphaerica|type=transcript|length=289bp|location=Sequence derived from alignment at sc0005331:4330..4618 (Clytia hemisphaerica)
NNTAAACCTTCCCAGAGACTGTCTACAGAATCATTCCATGGTTTGTACTT
GATCAATTGGAATTTACAAAATAAAGGATAACTGTCACTCTTTGGGTTTG
GACTATAGTTTGGAAAAGTACGAACAACAACTGCCTTTTTCCTCTTTTGA
ACCTTTTTGTCTTTAGCACTTATTTTCcagtttgaaacaaaatctaTGAA
GGTTACTTTGCCTAATCTCATTGTCTTCATAAACATATCTGGAAGCATAA
TCATCTAAGAAAGAGGTTTTGGTTTCAACGCCATCATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027937XLOC_027937Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044303-exon-sc0005331-1491911889:4330..4618TCONS_00044303-exon-sc0005331-1491911889:4330..4618Clytia hemisphaericaexon
TCONS_00044303-exon-sc0005331-1510915933:4330..4618TCONS_00044303-exon-sc0005331-1510915933:4330..4618Clytia hemisphaericaexon
TCONS_00044303-exon-sc0005331-1575043694:4330..4618TCONS_00044303-exon-sc0005331-1575043694:4330..4618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005331supercontigsc0005331:4330..4618 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.54534	5.94362	5.86987	2.26686	0	0.934595	2.10478	1.07074	2.92176	1.18797	0	7.54103	1.13495	0.729779	1.07808	0	0	0.679403	0.469316	1.96442	5.30697	5.92724	0.837531	1.8121	0.902862	2.60695	4.64257	7.12914	1.96009	2.22039
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044303 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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