TCONS_00044484 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044484
Unique NameTCONS_00044484
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2421

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044484 ID=TCONS_00044484|Name=TCONS_00044484|organism=Clytia hemisphaerica|type=transcript|length=2421bp
CAAAAACAGATAAGAGAAGCCTGTTTGAGATCTGTCTTTCCTTTACAGAT
TTTTTTGTGTGGTGtagtttgaaagtttttatacGCCGTGTTATAGAAGT
TCTAAAGTGATGGAGAAAACGGTTGAAAATAATCTTTTACAAACTCTTAA
CATCGAAAGATTGGTCGAATTTGACAGTCACATTGGggatgtttttcaaa
atgttttttatacaCTCTCGAATAACACGGCAATGAAGATAGAAAAAATG
GGCATTGTGTCTCATTTCTTAAGGAGTTGGAAAGACACGGTCGGTGCCTC
TAGTATCTCAAAAACATTACCATCTATCATAACAGGAAGCATCGTTGAAG
GAGCTTGTCTTTCTCGTTTATACCATCCCTCACATGAGCAGTCCCTGGAA
CTTGAAGCCGACATTATGTATATTGTAGGGGTCATCGATGAACAAACCGC
AAATCAATGTTTTCAGGATGAACCCAAAACTGGATTCTTGAAAGTGAAAT
ACTCTCCAAGTATTACAATGTTTACATCTGAGaatcaaatgaaaattgaa
aatgctgTGGAAATTACACCAGATGGTTGTAAATATCTCAACGGGAAAGA
GTTAAAAATTATGCATAAAAATCTACAAGTTAATGAACAGCGGTTACGTA
TTGATAATGGTTCGCCGTGCATTATTACAGTCAATCAGAAAATTAGTGGA
CCTAGTTCAGAAATCGTCTTCAAAATTGTCCCAATACACCATCAGCATCA
AATTGAAAACATCGCGTCTTTTCTCAAAGACATAACACAgctttttgaag
gaaaatgcgAATCTTTCTACCAAGAATTTACTCATGCTCAAGAACTTTGT
ACAATTCTAGAAAACGTTTTGAAAGCAGTCAAAGAAATTGAGTCAGATCG
TATTTTTGATAAGGAGCATGATGATAAAAACCTTCCCCTTCTTTCGTGTG
AGGCGGAAGACATCATATCACAAGTGATAGAAAAGTTTAACAGTCTAGAC
ACGAGTAAATTAGAAACCGATTTCAAAGAGATGCACTCACTTTTGGAGGG
AATAATTTTGTTATGTTCTGGTAACGAGGACAGTCATGCGAAAGCAAGAC
TTGATGTTTTCAATATCAAATCTTTGGACCTGACGGCTATGGCCAAAGAA
ACGCTACAAACTAACCCAATGGTTCAAGAAGTCAAAGGTCAAGGCAAAAC
CCTGAACGAAGCTGTAAAAGTGTTAGAGATGATTGATATCTCCCTTGTGA
AAGCTCATTCGAACTTACCAAATATTTTACAAGAATACAGAGAAAACATC
GTCAAAGATGTcgcaaatttagtgaaatctATCGAAGACCGATCCAAAGA
AGAATGTTATCACCAAAACATCGATTCCATATCTTTTGATAACGTATCCT
GCTTCTACTGTCCTTTCTGGCCCAAAATAGCCGAGGAATGGGTCCACAGA
AAACGCCAATGGCCTTCTACGGAACAGATCCAACAAATATCCGATGCTGG
AACTTTCATCGTAGCAAAACAAAGCGAGGAAGGTCAACACCACGGCTTAG
AATGGAGATGGTCTTTCTCAACCGCAGAAATATCACTGGCAAAGCTTCGA
ACTTCAACTATGAAGTATTgctatttcattttcaaaacaatgttttataa
atattttaaaaatttccctgGTGTTGTAAAATCGTTACCGTCATATTTTG
CGAAGACCTGCATGCTGTACGTTTCTGAGCAGCAAAAAGAATATTGGTGG
GATGAAAATGGTGTTGTAGGCTCATTACTGCAtcttttcaagtttttgaa
GAAGAGTCTAGAGGAAAAGATGCTTCCCCATTACTTCATCCATCACCTTA
ACCTTCTCCAGGATATAGACATATCGTTGATAAATCAAGCTCTAAACATG
GTCAACCAGATCCTACAAGATCCATCTAATTATCTAACACTAGAGGAAAG
CCGTATGGAAATTTTTAACCGAATTGAGAATGAAGTCAACTCACTTCTAT
CAACTGGAGTGGAAAGTGAAGAGAGGAAAACNcatggaaatttttaaccg
AATTGAGAATGAAGTCAACTCACTTCTATCAACTGGAGTGGAAAGTGAAG
AGAGGAAAACACCTACAGGATATTACAAGCATTTCACTTCCCTTCGTCAA
AAATGTGCTGAAGTTACGAGTAATCTACATCGGTCAGCCTTTCTCGGAGA
ATACTACCGTCTTCGTTTCCAACAAGTTCACTTACAAAAGCTTATTGAAA
CCCAAGATAAAATGTTACAAAAGAACCGCGGGAAGGGGCCTGATTACGAC
CTTATCGAAGAATATTTCGTTAATAACAAAATGGTATTACAAAAACTGGA
CCAGGAAATCCCAACTATGCGCCGATCCATATCTGAAGCACTGATCGCGA
TTTGTcatttgttggaaagat
Run BLAST on NCBI

protein sequence of TCONS_00044484-protein

>TCONS_00044484-protein ID=TCONS_00044484-protein|Name=TCONS_00044484-protein|organism=Clytia hemisphaerica|type=polypeptide|length=645bp
MEKTVENNLLQTLNIERLVEFDSHIGDVFQNVFYTLSNNTAMKIEKMGIV
SHFLRSWKDTVGASSISKTLPSIITGSIVEGACLSRLYHPSHEQSLELEA
DIMYIVGVIDEQTANQCFQDEPKTGFLKVKYSPSITMFTSENQMKIENAV
EITPDGCKYLNGKELKIMHKNLQVNEQRLRIDNGSPCIITVNQKISGPSS
EIVFKIVPIHHQHQIENIASFLKDITQLFEGKCESFYQEFTHAQELCTIL
ENVLKAVKEIESDRIFDKEHDDKNLPLLSCEAEDIISQVIEKFNSLDTSK
LETDFKEMHSLLEGIILLCSGNEDSHAKARLDVFNIKSLDLTAMAKETLQ
TNPMVQEVKGQGKTLNEAVKVLEMIDISLVKAHSNLPNILQEYRENIVKD
VANLVKSIEDRSKEECYHQNIDSISFDNVSCFYCPFWPKIAEEWVHRKRQ
WPSTEQIQQISDAGTFIVAKQSEEGQHHGLEWRWSFSTAEISLAKLRTST
MKYCYFIFKTMFYKYFKNFPGVVKSLPSYFAKTCMLYVSEQQKEYWWDEN
GVVGSLLHLFKFLKKSLEEKMLPHYFIHHLNLLQDIDISLINQALNMVNQ
ILQDPSNYLTLEESRMEIFNRIENEVNSLLSTGVESEERKXHGNF
Run BLAST on NCBI

transcript from alignment at sc0005647:198..4105+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044484 ID=TCONS_00044484|Name=TCONS_00044484|organism=Clytia hemisphaerica|type=transcript|length=3908bp|location=Sequence derived from alignment at sc0005647:198..4105+ (Clytia hemisphaerica)
CAAAAACAGATAAGAGAAGCCTGTTTGAGATCTGTCTTTCCTTTACAGAT TTTTTTGTGTGGTGtagtttgaaagtttttatacGCCGTGTTATAGAAGT TCTAAAGTGATGGAGAAAACGGTTGAAAATAATCTTTTACAAACTCTTAA CATCGAAAGATTGGTCGAATTTGACAGTCACATTGGggatgtttttcaaa atgttttttatacaCTCTCGAATAACACGGCAATGAAGATAGAAAAAATG GGCATTGTGTCTCATTTCTTAAGGAGTTGGAAAGACACGGTCGGTGCCTC TAGTATCTCAAAAACATTACCATCTATCATAACAGGTAACAAATCTTAAT CTAAAACTTGTTCACAATGTCCTGCGGAGGAGGTCCTTGagcgaaaaaag ttttgaaagactCTCACTATCCCTTAGCACAAGTAAaatagaataatttt tttcattccattCAACTTTGAAGCCACAGAAAGCATATTTCATCCAATTG ATTTCATAGATATTCAAACCCCACCCATCTTGATATCGTCACCTACTGGC CAAAGAGACAGAGTACGTGATGTTAAGTCTAttcgagacaggggtgtaat ctGAGCTGTTCTGCATCAACTTCCTTCCCTCATGTGCTAGCACGCTAGAG GACTATACTTAAAACATTATATAATGGTCTTAAGGAAACCCGGAAAGGgt atacttttttataagagcaaactatataagaatataaggcttcgctggcc aaaatctaaagaacaagttaagaacacttaAAGGTTTCGTGACCTTTAAA ACNtttttttgagcattttgatgtaatttcttaagaaattgcatgttttg aagtttccaaagccttagtatgttcttagaatgttcttaaatttttgggc tcgaagccttatgttcttatatagtttgttcttataaaaaaaagtgtact ggCCACAGAGACAGAGTACGTGATGTTAAGTCTAttcgagacaggggtgt aatctGAGCTGTTCTGCATCAACTTCCTTCCCTCGTGTGCTAGCACGCTA GAGGACTATACTTAAAACATTATATAATGGTCTTAAGGAAACCCGGAAAG Ggtatacttttttataagagcaaactatataagaatataaggcttcgctg gccaaaatctaaagaacaagttaagaacacttaAAGGTTTCGTGACcttt aaaacatccaatttcttgGGAAATTGCACAAGAATGCTCATTAAATGAAT Gatgaaattaagaatttttctagacataaaaaattatttgaattttcatg tataaaaaaatgtgtgagTACAACAGAGTTACAATTTTAATGTCATCCca taacaattatatacctATAACACCTATATTATTATATGATACGTATTATA AATGACTTCGTTCTATTTCATCCATATAGGAAGCATCGTTGAAGGAGCTT GTCTTTCTCGTTTATACCATCCCTCACATGAGCAGTCCCTGGAACTTGAA GCCGACATTATGTATATTGTAGGGGTCATCGATGAACAAACCGCAAATCA ATGTTTTCAGGTACATAAGATTAAAATGGGTAATGATCATGACgttttaa cacccctgtgtcacagacccacgccccactgaaaaattggcgaaaatacc ctagaattttagccccgttgaaaaattgaatttaatttcatccccattcg aaattcaatgtttaaaaatcgcacttcaaaaccatccctattggattttt caaccttggaactgtaaattttctatccccattggaatttcaataggaat tatccccactgaggaaaaaatttccaccggggctgtggaGATAGGGGTGT GTTTTAAAATCATTAACTGGTTCTTATAGAAAAGGATTGATTCCAATATT TTTGAGGAAGTGAATAGTACTGTGACCCAAATacaatttgtttattttcc CAGGATGAACCCAAAACTGGATTCTTGAAAGTGAAATACTCTCCAAGTAT TACAATGTTTACATCTGAGaatcaaatgaaaattgaaaatgctgTGGAAA TTACACCAGATGGTTGTAAATATCTCAACGGGAAAGAGTTAAAAATTATG CATAAAAATCTACAAGTTAATGAACAGCGGTTACGTATTGATAATGGTTC GCCGTGCATTATTACAGTCAATCAGAAAATTAGTGGACCTAGTTCAGAAA TCGTCTTCAAAATTGTCCCAATACACCATCAGCATCAAATTGAAAACATC GCGTCTTTTCTCAAAGACATAACACAgctttttgaaggaaaatgcgAATC TTTCTACCAAGAATTTACTCATGCTCAAGAACTTTGTACAATTCTAGAAA ACGTTTTGAAAGCAGTCAAAGAAATTGAGTCAGATCGTATTTTTGATAAG GAGCATGATGATAAAAACCTTCCCCTTCTTTCGTGTGAGGCGGAAGACAT CATATCACAAGTGATAGAAAAGTTTAACAGTCTAGACACGAGTAAATTAG AAACCGATTTCAAAGAGATGCACTCACTTTTGGAGGGAATAATTTTGTTA TGTTCTGGTAACGAGGACAGTCATGCGAAAGCAAGACTTGATGTTTTCAA TATCAAATCTTTGGACCTGACGGCTATGGCCAAAGAAACGCTACAAACTA ACCCAATGGTTCAAGAAGTCAAAGGTCAAGGCAAAACCCTGAACGAAGCT GTAAAAGTGTTAGAGATGATTGATATCTCCCTTGTGAAAGCTCATTCGAA CTTACCAAATATTTTACAAGAATACAGAGAAAACATCGTCAAAGATGTcg caaatttagtgaaatctATCGAAGACCGATCCAAAGAAGAATGTTATCAC CAAAACATCGATTCCATATCTTTTGATAACGTATCCTGCTTCTACTGTCC TTTCTGGCCCAAAATAGCCGAGGAATGGGTCCACAGAAAACGCCAATGGC CTTCTACGGAACAGATCCAACAAATATCCGATGCTGGAACTTTCATCGTA GCAAAACAAAGCGAGGAAGGTCAACACCACGGCTTAGAATGGAGATGGTC TTTCTCAACCGCAGAAATATCACTGGCAAAGCTTCGAACTTCAACTATGA AGTATTgctatttcattttcaaaacaatgttttataaatattttaaaaat ttccctgGTGTTGTAAAATCGTTACCGTCATATTTTGCGAAGACCTGCAT GCTGTACGTTTCTGAGCAGCAAAAAGAATATTGGTGGGATGAAAATGGTG TTGTAGGCTCATTACTGCAtcttttcaagtttttgaaGAAGAGTCTAGAG GAAAAGATGCTTCCCCATTACTTCATCCATCACCTTAACCTTCTCCAGGA TATAGACATATCGTTGATAAATCAAGCTCTAAACATGGTCAACCAGATCC TACAAGATCCATCTAATTATCTAACACTAGAGGAAAGCCGTATGGAAATT TTTAACCGAATTGAGAATGAAGTCAACTCACTTCTATCAACTGGAGTGGA AAGTGAAGAGAGGAAAACNcatggaaatttttaaccgAATTGAGAATGAA GTCAACTCACTTCTATCAACTGGAGTGGAAAGTGAAGAGAGGAAAACACC TACAGGATATTACAAGCATTTCACTTCCCTTCGTCAAAAATGTGCTGAAG TTACGAGTAATCTACATCGGTCAGCCTTTCTCGGAGAATACTACCGTCTT CGTTTCCAACAAGTTCACTTACAAAAGCTTATTGAAACCCAAGATAAAAT GTTACAAAAGAACCGCGGGAAGGGGCCTGATTACGACCTTATCGAAGAAT ATTTCGTTAATAACAAAATGGTATTACAAAAACTGGACCAGGAAATCCCA ACTATGCGCCGATCCATATCTGAAGCACTGATCGCGATTTGTcatttgtt ggaaagat

Coding sequence (CDS) from alignment at sc0005647:198..4105+

>TCONS_00044484 ID=TCONS_00044484|Name=TCONS_00044484|organism=Clytia hemisphaerica|type=CDS|length=5814bp|location=Sequence derived from alignment at sc0005647:198..4105+ (Clytia hemisphaerica)
ATGGAGAAAACGGTTGAAAATAATCTTTTACAAACTCTTAACATCGAAAG
ATTGGTCGAATTTGACAGTCACATTGGggatgtttttcaaaatgtttttt
atacaCTCTCGAATAACACGGCAATGAAGATAGAAAAAATGGGCATTGTG
TCTCATTTCTTAAGGAGTTGGAAAGACACGGTCGGTGCCTCTAGTATCTC
AAAAACATTACCATCTATCATAACAGGAAGCATCGTTGAAGGAGCTTGTC
TTTCTCGTTTATACCATCCCTCACATGAGCAGTCCCTGGAACTTGAAGCC
GACATTATGTATATTGTAGGGGTCATCGATGAACAAACCGCAAATCAATG
TTTTCAGGATGAACCCAAAACTGGATTCTTGAAAGTGAAATACTCTCCAA
GTATTACAATGTTTACATCTGAGaatcaaatgaaaattgaaaatgctgTG
GAAATTACACCAGATGGTTGTAAATATCTCAACGGGAAAGAGTTAAAAAT
TATGCATAAAAATCTACAAGTTAATGAACAGCGGTTACGTATTGATAATG
GTTCGCCGTGCATTATTACAGTCAATCAGAAAATTAGTGGACCTAGTTCA
GAAATCGTCTTCAAAATTGTCCCAATACACCATCAGCATCAAATTGAAAA
CATCGCGTCTTTTCTCAAAGACATAACACAgctttttgaaggaaaatgcg
AATCTTTCTACCAAGAATTTACTCATGCTCAAGAACTTTGTACAATTCTA
GAAAACGTTTTGAAAGCAGTCAAAGAAATTGAGTCAGATCGTATTTTTGA
TAAGGAGCATGATGATAAAAACCTTCCCCTTCTTTCGTGTGAGGCGGAAG
ACATCATATCACAAGTGATAGAAAAGTTTAACAGTCTAGACACGAGTAAA
TTAGAAACCGATTTCAAAGAGATGCACTCACTTTTGGAGGGAATAATTTT
GTTATGTTCTGGTAACGAGGACAGTCATGCGAAAGCAAGACTTGATGTTT
TCAATATCAAATCTTTGGACCTGACGGCTATGGCCAAAGAAACGCTACAA
ACTAACCCAATGGTTCAAGAAGTCAAAGGTCAAGGCAAAACCCTGAACGA
AGCTGTAAAAGTGTTAGAGATGATTGATATCTCCCTTGTGAAAGCTCATT
CGAACTTACCAAATATTTTACAAGAATACAGAGAAAACATCGTCAAAGAT
GTcgcaaatttagtgaaatctATCGAAGACCGATCCAAAGAAGAATGTTA
TCACCAAAACATCGATTCCATATCTTTTGATAACGTATCCTGCTTCTACT
GTCCTTTCTGGCCCAAAATAGCCGAGGAATGGGTCCACAGAAAACGCCAA
TGGCCTTCTACGGAACAGATCCAACAAATATCCGATGCTGGAACTTTCAT
CGTAGCAAAACAAAGCGAGGAAGGTCAACACCACGGCTTAGAATGGAGAT
GGTCTTTCTCAACCGCAGAAATATCACTGGCAAAGCTTCGAACTTCAACT
ATGAAGTATTgctatttcattttcaaaacaatgttttataaatattttaa
aaatttccctgGTGTTGTAAAATCGTTACCGTCATATTTTGCGAAGACCT
GCATGCTGTACGTTTCTGAGCAGCAAAAAGAATATTGGTGGGATGAAAAT
GGTGTTGTAGGCTCATTACTGCAtcttttcaagtttttgaaGAAGAGTCT
AGAGGAAAAGATGCTTCCCCATTACTTCATCCATCACCTTAACCTTCTCC
AGGATATAGACATATCGTTGATAAATCAAGCTCTAAACATGGTCAACCAG
ATCCTACAAGATCCATCTAATTATCTAACACTAGAGGAAAGCCGTATGGA
AATTTTTAACCGAATTGAGAATGAAGTCAACTCACTTCTATCAACTGGAG
TGGAAAGTGAAGAGAGGAAAACNcatggaaatttttaaATGGAGAAAACG
GTTGAAAATAATCTTTTACAAACTCTTAACATCGAAAGATTGGTCGAATT
TGACAGTCACATTGGggatgtttttcaaaatgttttttatacaCTCTCGA
ATAACACGGCAATGAAGATAGAAAAAATGGGCATTGTGTCTCATTTCTTA
AGGAGTTGGAAAGACACGGTCGGTGCCTCTAGTATCTCAAAAACATTACC
ATCTATCATAACAGGAAGCATCGTTGAAGGAGCTTGTCTTTCTCGTTTAT
ACCATCCCTCACATGAGCAGTCCCTGGAACTTGAAGCCGACATTATGTAT
ATTGTAGGGGTCATCGATGAACAAACCGCAAATCAATGTTTTCAGGATGA
ACCCAAAACTGGATTCTTGAAAGTGAAATACTCTCCAAGTATTACAATGT
TTACATCTGAGaatcaaatgaaaattgaaaatgctgTGGAAATTACACCA
GATGGTTGTAAATATCTCAACGGGAAAGAGTTAAAAATTATGCATAAAAA
TCTACAAGTTAATGAACAGCGGTTACGTATTGATAATGGTTCGCCGTGCA
TTATTACAGTCAATCAGAAAATTAGTGGACCTAGTTCAGAAATCGTCTTC
AAAATTGTCCCAATACACCATCAGCATCAAATTGAAAACATCGCGTCTTT
TCTCAAAGACATAACACAgctttttgaaggaaaatgcgAATCTTTCTACC
AAGAATTTACTCATGCTCAAGAACTTTGTACAATTCTAGAAAACGTTTTG
AAAGCAGTCAAAGAAATTGAGTCAGATCGTATTTTTGATAAGGAGCATGA
TGATAAAAACCTTCCCCTTCTTTCGTGTGAGGCGGAAGACATCATATCAC
AAGTGATAGAAAAGTTTAACAGTCTAGACACGAGTAAATTAGAAACCGAT
TTCAAAGAGATGCACTCACTTTTGGAGGGAATAATTTTGTTATGTTCTGG
TAACGAGGACAGTCATGCGAAAGCAAGACTTGATGTTTTCAATATCAAAT
CTTTGGACCTGACGGCTATGGCCAAAGAAACGCTACAAACTAACCCAATG
GTTCAAGAAGTCAAAGGTCAAGGCAAAACCCTGAACGAAGCTGTAAAAGT
GTTAGAGATGATTGATATCTCCCTTGTGAAAGCTCATTCGAACTTACCAA
ATATTTTACAAGAATACAGAGAAAACATCGTCAAAGATGTcgcaaattta
gtgaaatctATCGAAGACCGATCCAAAGAAGAATGTTATCACCAAAACAT
CGATTCCATATCTTTTGATAACGTATCCTGCTTCTACTGTCCTTTCTGGC
CCAAAATAGCCGAGGAATGGGTCCACAGAAAACGCCAATGGCCTTCTACG
GAACAGATCCAACAAATATCCGATGCTGGAACTTTCATCGTAGCAAAACA
AAGCGAGGAAGGTCAACACCACGGCTTAGAATGGAGATGGTCTTTCTCAA
CCGCAGAAATATCACTGGCAAAGCTTCGAACTTCAACTATGAAGTATTgc
tatttcattttcaaaacaatgttttataaatattttaaaaatttccctgG
TGTTGTAAAATCGTTACCGTCATATTTTGCGAAGACCTGCATGCTGTACG
TTTCTGAGCAGCAAAAAGAATATTGGTGGGATGAAAATGGTGTTGTAGGC
TCATTACTGCAtcttttcaagtttttgaaGAAGAGTCTAGAGGAAAAGAT
GCTTCCCCATTACTTCATCCATCACCTTAACCTTCTCCAGGATATAGACA
TATCGTTGATAAATCAAGCTCTAAACATGGTCAACCAGATCCTACAAGAT
CCATCTAATTATCTAACACTAGAGGAAAGCCGTATGGAAATTTTTAACCG
AATTGAGAATGAAGTCAACTCACTTCTATCAACTGGAGTGGAAAGTGAAG
AGAGGAAAACNcatggaaatttttaaATGGAGAAAACGGTTGAAAATAAT
CTTTTACAAACTCTTAACATCGAAAGATTGGTCGAATTTGACAGTCACAT
TGGggatgtttttcaaaatgttttttatacaCTCTCGAATAACACGGCAA
TGAAGATAGAAAAAATGGGCATTGTGTCTCATTTCTTAAGGAGTTGGAAA
GACACGGTCGGTGCCTCTAGTATCTCAAAAACATTACCATCTATCATAAC
AGGAAGCATCGTTGAAGGAGCTTGTCTTTCTCGTTTATACCATCCCTCAC
ATGAGCAGTCCCTGGAACTTGAAGCCGACATTATGTATATTGTAGGGGTC
ATCGATGAACAAACCGCAAATCAATGTTTTCAGGATGAACCCAAAACTGG
ATTCTTGAAAGTGAAATACTCTCCAAGTATTACAATGTTTACATCTGAGa
atcaaatgaaaattgaaaatgctgTGGAAATTACACCAGATGGTTGTAAA
TATCTCAACGGGAAAGAGTTAAAAATTATGCATAAAAATCTACAAGTTAA
TGAACAGCGGTTACGTATTGATAATGGTTCGCCGTGCATTATTACAGTCA
ATCAGAAAATTAGTGGACCTAGTTCAGAAATCGTCTTCAAAATTGTCCCA
ATACACCATCAGCATCAAATTGAAAACATCGCGTCTTTTCTCAAAGACAT
AACACAgctttttgaaggaaaatgcgAATCTTTCTACCAAGAATTTACTC
ATGCTCAAGAACTTTGTACAATTCTAGAAAACGTTTTGAAAGCAGTCAAA
GAAATTGAGTCAGATCGTATTTTTGATAAGGAGCATGATGATAAAAACCT
TCCCCTTCTTTCGTGTGAGGCGGAAGACATCATATCACAAGTGATAGAAA
AGTTTAACAGTCTAGACACGAGTAAATTAGAAACCGATTTCAAAGAGATG
CACTCACTTTTGGAGGGAATAATTTTGTTATGTTCTGGTAACGAGGACAG
TCATGCGAAAGCAAGACTTGATGTTTTCAATATCAAATCTTTGGACCTGA
CGGCTATGGCCAAAGAAACGCTACAAACTAACCCAATGGTTCAAGAAGTC
AAAGGTCAAGGCAAAACCCTGAACGAAGCTGTAAAAGTGTTAGAGATGAT
TGATATCTCCCTTGTGAAAGCTCATTCGAACTTACCAAATATTTTACAAG
AATACAGAGAAAACATCGTCAAAGATGTcgcaaatttagtgaaatctATC
GAAGACCGATCCAAAGAAGAATGTTATCACCAAAACATCGATTCCATATC
TTTTGATAACGTATCCTGCTTCTACTGTCCTTTCTGGCCCAAAATAGCCG
AGGAATGGGTCCACAGAAAACGCCAATGGCCTTCTACGGAACAGATCCAA
CAAATATCCGATGCTGGAACTTTCATCGTAGCAAAACAAAGCGAGGAAGG
TCAACACCACGGCTTAGAATGGAGATGGTCTTTCTCAACCGCAGAAATAT
CACTGGCAAAGCTTCGAACTTCAACTATGAAGTATTgctatttcattttc
aaaacaatgttttataaatattttaaaaatttccctgGTGTTGTAAAATC
GTTACCGTCATATTTTGCGAAGACCTGCATGCTGTACGTTTCTGAGCAGC
AAAAAGAATATTGGTGGGATGAAAATGGTGTTGTAGGCTCATTACTGCAt
cttttcaagtttttgaaGAAGAGTCTAGAGGAAAAGATGCTTCCCCATTA
CTTCATCCATCACCTTAACCTTCTCCAGGATATAGACATATCGTTGATAA
ATCAAGCTCTAAACATGGTCAACCAGATCCTACAAGATCCATCTAATTAT
CTAACACTAGAGGAAAGCCGTATGGAAATTTTTAACCGAATTGAGAATGA
AGTCAACTCACTTCTATCAACTGGAGTGGAAAGTGAAGAGAGGAAAACNc
atggaaatttttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028114XLOC_028114Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044484-proteinTCONS_00044484-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044484-exon-sc0005647-1491911889:198..532TCONS_00044484-exon-sc0005647-1491911889:198..532Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1510915933:198..532TCONS_00044484-exon-sc0005647-1510915933:198..532Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1575043694:198..532TCONS_00044484-exon-sc0005647-1575043694:198..532Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1491911889:1627..1757TCONS_00044484-exon-sc0005647-1491911889:1627..1757Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1510915933:1627..1757TCONS_00044484-exon-sc0005647-1510915933:1627..1757Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1575043694:1627..1757TCONS_00044484-exon-sc0005647-1575043694:1627..1757Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1491911889:2151..4105TCONS_00044484-exon-sc0005647-1491911889:2151..4105Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1510915933:2151..4105TCONS_00044484-exon-sc0005647-1510915933:2151..4105Clytia hemisphaericaexon
TCONS_00044484-exon-sc0005647-1575043694:2151..4105TCONS_00044484-exon-sc0005647-1575043694:2151..4105Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005647supercontigsc0005647:198..4105 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0615221 0.0938419 0.122406 0.0710665 2.4441 1.9918 3.14523 2.95502 1.20437 2.31638 3.1582 0.869711 6.68691 6.15668 1.69904 2.5395 2.02993 2.86732 10.2893 11.6983 10.3841 10.0775 3.41702 5.60079 9.49071 9.2533 10.9669 11.4954 6.90261 4.76322
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044484 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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