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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044500 ID=TCONS_00044500|Name=TCONS_00044500|organism=Clytia hemisphaerica|type=transcript|length=1099bp
CATAAAATTCTACCTCAAGAGTATTGctgtcttttttctttcttgttttt
taaaagactttatttttagtaaatggCTTCgatatcaaaaacaaataaag
atgGAGTTACAGTAGATTACAAATACAAATCATGAAATAGTTTATCAAAT
TTGGTTGTAAAGTGTGTGGTGTGATTGGATAGAGTTAGAGATTGGTGGTG
ATGGGTTTTTAGTGTTGCAGGACGcaggatttatttaaaattaacACATT
TTGTTGTCGCTTCAATTTGAATGATGGAAGCCATTACTGGATTTTGACAA
TTTGACAACCTTGGACAACTGAACTGTGCTGGACAATTTTTTATGTTGGG
GCGATTCCATTTTTCAAGATACCAACTATGGTTTTTATTGAGATAACTTT
TTTTGATGAATATTCAAATTGATTTATGGCAAACCAGTGGATTTCTACAA
AACATTACTGAAAGATGATACAATTTCCAATAGTCGTTTTTAGGCAATCA
CAATGGTCTAGGCCGTTCGTAAAAAATAGCTTGGTTCCCATCACCGaacc
gaccctattttttttttaaagtaaaaggaGTCGAAGGGACAGGAAGCGGT
TTTGGCGCTGCTCAAATGTCATCATCAACCTCCCCCATTACAAACTCTGA
GCGATGTAGCAAGCGGCGTTTGAGCGGATTTCCATCCAAATTTACTCCGA
AATCCAGCTTTGTATGgattttttcccgattttcattttttggaccaAAT
GGAACCACTCTGGCTATAAGAACCTGGGGCTTAATTTTTAGAGAATGGTT
TTTAAAACAACCTGGTGGATGAAGATACTGTCGCATGATATTTTTGAGCA
TAAATTTTTAACCCCGACCGACCcactttttcaaagttggggTGACGGGA
ACAAACTATTTTTTACTAACGGCCCTATTGAATATAACTAATTACTACAG
ACTGTCACGTTCGCCTAAAGCTCCCCATAATTAGTGACAAAAATATTACG
TAATAGATTAACGACATGATAACCTGGTGCCTTACAACAACAGAACTTTC
CTGGCACTTATTCGGGATCCTTCCGCTGCTTTTATCTGATAAACTGGCA Run BLAST on NCBI transcript from alignment at sc0005690:2761..3859 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044500 ID=TCONS_00044500|Name=TCONS_00044500|organism=Clytia hemisphaerica|type=transcript|length=1099bp|location=Sequence derived from alignment at sc0005690:2761..3859 (Clytia hemisphaerica)
TGCCAGTTTATCAGATAAAAGCAGCGGAAGGATCCCGAATAAGTGCCAGG
AAAGTTCTGTTGTTGTAAGGCACCAGGTTATCATGTCGTTAATCTATTAC
GTAATATTTTTGTCACTAATTATGGGGAGCTTTAGGCGAACGTGACAGTC
TGTAGTAATTAGTTATATTCAATAGGGCCGTTAGTAAAAAATAGTTTGTT
CCCGTCAccccaactttgaaaaagtgGGTCGGTCGGGGTTAAAAATTTAT
GCTCAAAAATATCATGCGACAGTATCTTCATCCACCAGGTTGTTTTAAAA
ACCATTCTCTAAAAATTAAGCCCCAGGTTCTTATAGCCAGAGTGGTTCCA
TTtggtccaaaaaatgaaaatcgggaaaaaatcCATACAAAGCTGGATTT
CGGAGTAAATTTGGATGGAAATCCGCTCAAACGCCGCTTGCTACATCGCT
CAGAGTTTGTAATGGGGGAGGTTGATGATGACATTTGAGCAGCGCCAAAA
CCGCTTCCTGTCCCTTCGACtccttttactttaaaaaaaaaatagggtcg
gttCGGTGATGGGAACCAAGCTATTTTTTACGAACGGCCTAGACCATTGT
GATTGCCTAAAAACGACTATTGGAAATTGTATCATCTTTCAGTAATGTTT
TGTAGAAATCCACTGGTTTGCCATAAATCAATTTGAATATTCATCAAAAA
AAGTTATCTCAATAAAAACCATAGTTGGTATCTTGAAAAATGGAATCGCC
CCAACATAAAAAATTGTCCAGCACAGTTCAGTTGTCCAAGGTTGTCAAAT
TGTCAAAATCCAGTAATGGCTTCCATCATTCAAATTGAAGCGACAACAAA
ATGTgttaattttaaataaatcctgCGTCCTGCAACACTAAAAACCCATC
ACCACCAATCTCTAACTCTATCCAATCACACCACACACTTTACAACCAAA
TTTGATAAACTATTTCATGATTTGTATTTGTAATCTACTGTAACTCcatc
tttatttgtttttgatatcGAAGccatttactaaaaataaagtcttttaa
aaaacaagaaagaaaaaagacagCAATACTCTTGAGGTAGAATTTTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044500-exon-sc0005690-1491911889:2761..3859 | TCONS_00044500-exon-sc0005690-1491911889:2761..3859 | Clytia hemisphaerica | exon |
| TCONS_00044500-exon-sc0005690-1510915933:2761..3859 | TCONS_00044500-exon-sc0005690-1510915933:2761..3859 | Clytia hemisphaerica | exon |
| TCONS_00044500-exon-sc0005690-1575043694:2761..3859 | TCONS_00044500-exon-sc0005690-1575043694:2761..3859 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005690 | supercontig | sc0005690:2761..3859 . |
Blast
The following BLAST results are available for this feature:
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