TCONS_00044545 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044545
Unique NameTCONS_00044545
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1703

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044545 ID=TCONS_00044545|Name=TCONS_00044545|organism=Clytia hemisphaerica|type=transcript|length=1703bp
ggtgccagataatgtTCGACAATGAGCTAGATACTTCTTTCACTGCTTGA
AAATGAACTTAGAGAAATGACAAACAATAACGCCTGGTAACTCTATACAA
AGTACTTGTTTTAATTTAGGTTGTTTCTTGGATGCTGTATCTCAGCTATC
CTGACAGCTCTGTTGATGTTTGTCATCGATTTCTACTTGATGATTGCTTA
TTACACTGATCAGGAGAATGTTCTCAAGCGAGCTGTATTGAACACTTGGC
AGTTGTTTGTTCCAGTTTGCAAAGAAGCATACATCATTTTCGTCATCGTC
AATGGATTATTATTATTGATTGCAATGCTTCTCATTGGCCATCTACTGCT
CTTCCATTGTTATCTACTTTGCAAGAACTTGTCTACGTACGACTATATCA
TGCAGAGCCGAACAGCCACGTCTGCGTCCAAAGCTTCATTACCATCAGAC
GTGGAAACAGGAGACGAGCCTGCACCACCAGTACTCAGGCCACTATCGTC
ACAATCGCATACATATCAAGAGGTCGATGATGTCCGTAAAGAAAAGAGTT
CTTACGAGATGACCCACATCGAAGAAGACAAAACGTACGTCAAAATCATC
GACAAAACAAAACAGCCTTCAACTGAACAACCTTTACCAGTGGTCGAAGA
AATAGTCACCAACCAGAACGTGACAGTCGTTGAGACAGCCATAGATGTCG
CAGACAACCATCAGCAGCCACAACAAGAAGAGGAGAGACCGCCTTCTTCA
ACGTCCTCGGCTCAcaagaagaaaaagagaaagaaggAGCGCTCTTCCAG
CAAGATTGGCCTCATCCGCACTGATGACGACGAAGACAACGACTCTTTGT
CTTCTGCACGATCCCATAATTCATTGCGATCGGCTGAAGAAGAACGTTAC
ATTCAAATGCAGAACGAACGCGTGATGCAGAATTTCCAAGTCATGGGTGC
CAGTACACCCAATAGCGGGCGCGAAAGTAAATCGCACCCTGTTCCGTTAT
CCGAGGAGTCTGCGTACGAGAATATGAAAGAAACGACACGAATCGAGTCT
GTTGCCTCTAGACCTCGATCTCCATCACCGAAACAATCACAGCGCATTTC
ATTTGCTAATCAACAAAACGATTACGTCATGCGAGTCGCTGATAAACGAG
CTTCCAATAGTTCGTTGTCTACTCTGGCGCTTCAAGATCATGACGAAGTC
GGACAGCTCATTGCGGTTTCTCCTAAGATACCATTATCACCGCATCGGGA
AGAATCGTTCGAAAGTAAAACGTCATCCAAACGTAGTAGCGCTCCCTCTG
CTACCAAATTGATCGAAGTATCCAGTAAATCGTCCGGAATCGAAGCAGAC
GCTGATATCATCGATGAAGAAGACGAAACGAAAGACAGACCAGATTCACC
TGCCATCAGTCTGTCGGCCGTGCGTCCGTTAAGTGGTCGCCCTGAATCAG
CCAAAGGAAGTGATATATCACGTATTTCACTATCTAAAGGAGGTCGTTTA
CAGAGTCCTCGAGTTAGTGTAGTCTCAGAGATTACGAACATCACATTAGC
CTCTGAGAAATTTGGTACCGAAACAGAGTTAACAGGAGCTGTTCCCGTTG
ACGAGCAGAGGTCACAAGATCTTGTTTTGAAGGATGCTTTTTCGGAGAGT
GCAACGCTTGTGTTTGAAGACGAATTCGCGAACGATAACGACCAAAACAT
TGA
Run BLAST on NCBI

protein sequence of TCONS_00044545-protein

>TCONS_00044545-protein ID=TCONS_00044545-protein|Name=TCONS_00044545-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MFVIDFYLMIAYYTDQENVLKRAVLNTWQLFVPVCKEAYIIFVIVNGLLL
LIAMLLIGHLLLFHCYLLCKNLSTYDYIMQSRTATSASKASLPSDVETGD
EPAPPVLRPLSSQSHTYQEVDDVRKEKSSYEMTHIEEDKTYVKIIDKTKQ
PSTEQPLPVVEEIVTNQNVTVVETAIDVADNHQQPQQEEERPPSSTSSAH
KKKKRKKERSSSKIGLIRTDDDEDNDSLSSARSHNSLRSAEEERYIQMQN
ERVMQNFQVMGASTPNSGRESKSHPVPLSEESAYENMKETTRIESVASRP
RSPSPKQSQRISFANQQNDYVMRVADKRASNSSLSTLALQDHDEVGQLIA
VSPKIPLSPHREESFESKTSSKRSSAPSATKLIEVSSKSSGIEADADIID
EEDETKDRPDSPAISLSAVRPLSGRPESAKGSDISRISLSKGGRLQSPRV
SVVSEITNITLASEKFGTETELTGAVPVDEQRSQDLVLKDAFSESATLVF
EDEFANDNDQNI
Run BLAST on NCBI

transcript from alignment at sc0005757:734..3648+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044545 ID=TCONS_00044545|Name=TCONS_00044545|organism=Clytia hemisphaerica|type=transcript|length=2915bp|location=Sequence derived from alignment at sc0005757:734..3648+ (Clytia hemisphaerica)
ggtgccagataatgtTCGACAATGAGCTAGATACTTCTTTCACTGCTTGA
AAATGAACTTAGAGAAATGACAAACAATAACGCCTGGTAACTCTATACAA
AGTACTTGTTTTAATTTAGGTTGTTTCTTGGATGCTGTATCTCAGCTATC
CTGACAGCTCTGTTGATGTTTGTCATCGATTTCTACTTGATGATTGCTTA
TTACACTGATCAGGAGAATGTTCTCAAGCGAGCTGGTAAGTCATTagcgc
ttattttttttagttttatttgatattttgacAGAAAATTCATTGAATGC
TTTCATGAAGTAAAGCCTCTTTACTCTTGTTTCACCGATGAAAGCGACAC
AACTTAAGTTTCGATGTTAGTTTTTAAGTTTAGCCTAGGAATATATTCTA
CAATCTTACAAATAATgatttataatattttactttAGTATTGAACACTT
GGCAGTTGTTTGTTCCAGTTTGCAAAGAAGCATACATCATTTTCGTCATC
GTCAATGGATTATTATTATTGATTGCAATGCTTCTCATTGGCCATCTACT
GCTCTTCCATTGTTATCTACGTAAGTTATCTATTTTTTTATGTCTTTCTG
AGATGTTTttggttttatattgatttagccAGACCTAGTCGGTTAGGGTG
CAAGAGGAGTTCACATAGCTAAGTAATACAATAATCTCCTCTATTCTGGA
GGTATTCAGACCTACCTCGTgttaacaaaaaaaacattttcttcggtATT
TCTATTTCATCCAAGTTCCGGGTCCAAGTTGTCTAGTAATTGTAATCTTC
TGTAAAATTATCAAATTGTGAAATTCGCAACTTCAACAGTGTACTTTTCT
TGAAGTGACTGTGAAACAATCATTACTGATTACTGACTTCAAACCTTTCA
GTTTGCAAGAACTTGTCTACGTACGACTATATCATGCAGAGCCGAACAGC
CACGTCTGCGTCCAAAGCTTCATTACCATCAGACGTGGAAACAGGAGACG
AGCCTGCACCACCAGTACTCAGGCCACTATCGGTAAGATAATGTGGTGAT
AGATTAGATGGATAATAGATAGATCATTTTAAAAGCGTGTTTGCTTTCCA
ATCTGATTTAGGCCTTTTCAGAAGTCTATTTACTCCAAGTGCATCAATCC
AGGCTACCAAACTTAACAAAAATTATACTGAAATTAAACTTCAACACCAT
TGCTAATGAAACTGTTCATCGTTGACTTCAATTATTTTGACATTTCAGTC
ACAATCGCATACATATCAAGAGGTCGATGATGTCCGTAAAGAAAAGAGGT
AGGGCAAAGTAGATTTATTAAGCTGTTTTCTCAAGCTGCCTTCTCttatc
aaatcattttttaatGCTGTAAGGGTTTAATACTTAATTTAGATAGAAAT
TTTAGGAATTTGGCTCATGTTGTTTTAAGGCCAATTATTTCTCCCGTTGC
ACCTTGTTCACGGATAACGACACTTATTATGTTTCCACCGATACGTACTT
TTCAGTTCTTACGAGATGACCCACATCGAAGAAGACAAAACGTACGTCAA
AATCATCGACAAAACAAAACAGGTAATTTCGTAATTTTATTTAATATGAT
ATTATTGTTAGCCGAATagtaaacatttaaaatttcaagGAAGTTGCTTT
TTTTACAGAAACAATGTccgttcaatttttttcatacccATATCcaattt
tcctgattttttgtaagTTTTCTAGATATTCTTTCTGTAACATATCTTGA
CAAAACTCTAATCCAGTTTTTTTCCAGTCTCTCTAGACTTTGATTTTAAT
ACGTTGCTTTTATTGACTCTTTCCCAGCCTTCAACTGAACAACCTTTACC
AGTGGTCGAAGAAATAGTCACCAACCAGAACGTGACAGTCGTTGAGACAG
CCATAGATGTCGCAGACAACCATCAGCAGCCACAACAAGAAGAGGAGAGA
CCGCCTTCTTCAACGTCCTCGGCTCAcaagaagaaaaagagaaagaaggA
GCGCTCTTCCAGCAAGATTGGCCTCATCCGCACTGATGACGACGAAGACA
ACGACTCTTTGTCTTCTGCACGATCCCATAATTCATTGCGATCGGCTGAA
GAAGAACGTTACATTCAAATGCAGAACGAACGCGTGATGCAGAATTTCCA
AGTCATGGGTGCCAGTACACCCAATAGCGGGCGCGAAAGTAAATCGCACC
CTGTTCCGTTATCCGAGGAGTCTGCGTACGAGAATATGAAAGAAACGACA
CGAATCGAGTCTGTTGCCTCTAGACCTCGATCTCCATCACCGAAACAATC
ACAGCGCATTTCATTTGCTAATCAACAAAACGATTACGTCATGCGAGTCG
CTGATAAACGAGCTTCCAATAGTTCGTTGTCTACTCTGGCGCTTCAAGAT
CATGACGAAGTCGGACAGCTCATTGCGGTTTCTCCTAAGATACCATTATC
ACCGCATCGGGAAGAATCGTTCGAAAGTAAAACGTCATCCAAACGTAGTA
GCGCTCCCTCTGCTACCAAATTGATCGAAGTATCCAGTAAATCGTCCGGA
ATCGAAGCAGACGCTGATATCATCGATGAAGAAGACGAAACGAAAGACAG
ACCAGATTCACCTGCCATCAGTCTGTCGGCCGTGCGTCCGTTAAGTGGTC
GCCCTGAATCAGCCAAAGGAAGTGATATATCACGTATTTCACTATCTAAA
GGAGGTCGTTTACAGAGTCCTCGAGTTAGTGTAGTCTCAGAGATTACGAA
CATCACATTAGCCTCTGAGAAATTTGGTACCGAAACAGAGTTAACAGGAG
CTGTTCCCGTTGACGAGCAGAGGTCACAAGATCTTGTTTTGAAGGATGCT
TTTTCGGAGAGTGCAACGCTTGTGTTTGAAGACGAATTCGCGAACGATAA
CGACCAAAACATTGA

Coding sequence (CDS) from alignment at sc0005757:734..3648+

>TCONS_00044545 ID=TCONS_00044545|Name=TCONS_00044545|organism=Clytia hemisphaerica|type=CDS|length=9216bp|location=Sequence derived from alignment at sc0005757:734..3648+ (Clytia hemisphaerica)
ATGTTTGTCATCGATTTCTACTTGATGATTGCTTATTACACTGATCAGGA
GAATGTTCTCAAGCGAGCTGTATTGAACACTTGGCAGTTGTTTGTTCCAG
TTTGCAAAGAAGCATACATCATTTTCGTCATCGTCAATGGATTATTATTA
TTGATTGCAATGCTTCTCATTGGCCATCTACTGCTCTTCCATTGTTATCT
ACTTTGCAAGAACTTGTCTACGTACGACTATATCATGCAGAGCCGAACAG
CCACGTCTGCGTCCAAAGCTTCATTACCATCAGACGTGGAAACAGGAGAC
GAGCCTGCACCACCAGTACTCAGGCCACTATCGTCACAATCGCATACATA
TCAAGAGGTCGATGATGTCCGTAAAGAAAAGAGTTCTTACGAGATGACCC
ACATCGAAGAAGACAAAACGTACGTCAAAATCATCGACAAAACAAAACAG
CCTTCAACTGAACAACCTTTACCAGTGGTCGAAGAAATAGTCACCAACCA
GAACGTGACAGTCGTTGAGACAGCCATAGATGTCGCAGACAACCATCAGC
AGCCACAACAAGAAGAGGAGAGACCGCCTTCTTCAACGTCCTCGGCTCAc
aagaagaaaaagagaaagaaggAGCGCTCTTCCAGCAAGATTGGCCTCAT
CCGCACTGATGACGACGAAGACAACGACTCTTTGTCTTCTGCACGATCCC
ATAATTCATTGCGATCGGCTGAAGAAGAACGTTACATTCAAATGCAGAAC
GAACGCGTGATGCAGAATTTCCAAGTCATGGGTGCCAGTACACCCAATAG
CGGGCGCGAAAGTAAATCGCACCCTGTTCCGTTATCCGAGGAGTCTGCGT
ACGAGAATATGAAAGAAACGACACGAATCGAGTCTGTTGCCTCTAGACCT
CGATCTCCATCACCGAAACAATCACAGCGCATTTCATTTGCTAATCAACA
AAACGATTACGTCATGCGAGTCGCTGATAAACGAGCTTCCAATAGTTCGT
TGTCTACTCTGGCGCTTCAAGATCATGACGAAGTCGGACAGCTCATTGCG
GTTTCTCCTAAGATACCATTATCACCGCATCGGGAAGAATCGTTCGAAAG
TAAAACGTCATCCAAACGTAGTAGCGCTCCCTCTGCTACCAAATTGATCG
AAGTATCCAGTAAATCGTCCGGAATCGAAGCAGACGCTGATATCATCGAT
GAAGAAGACGAAACGAAAGACAGACCAGATTCACCTGCCATCAGTCTGTC
GGCCGTGCGTCCGTTAAGTGGTCGCCCTGAATCAGCCAAAGGAAGTGATA
TATCACGTATTTCACTATCTAAAGGAGGTCGTTTACAGAGTCCTCGAGTT
AGTGTAGTCTCAGAGATTACGAACATCACATTAGCCTCTGAGAAATTTGG
TACCGAAACAGAGTTAACAGGAGCTGTTCCCGTTGACGAGCAGAGGTCAC
AAGATCTTGTTTTGAAGGATGCTTTTTCGGAGAGTGCAACGCTTGTGTTT
GAAGACGAATTCGCGAACGATAACGACCAAAACATTATGTTTGTCATCGA
TTTCTACTTGATGATTGCTTATTACACTGATCAGGAGAATGTTCTCAAGC
GAGCTGTATTGAACACTTGGCAGTTGTTTGTTCCAGTTTGCAAAGAAGCA
TACATCATTTTCGTCATCGTCAATGGATTATTATTATTGATTGCAATGCT
TCTCATTGGCCATCTACTGCTCTTCCATTGTTATCTACTTTGCAAGAACT
TGTCTACGTACGACTATATCATGCAGAGCCGAACAGCCACGTCTGCGTCC
AAAGCTTCATTACCATCAGACGTGGAAACAGGAGACGAGCCTGCACCACC
AGTACTCAGGCCACTATCGTCACAATCGCATACATATCAAGAGGTCGATG
ATGTCCGTAAAGAAAAGAGTTCTTACGAGATGACCCACATCGAAGAAGAC
AAAACGTACGTCAAAATCATCGACAAAACAAAACAGCCTTCAACTGAACA
ACCTTTACCAGTGGTCGAAGAAATAGTCACCAACCAGAACGTGACAGTCG
TTGAGACAGCCATAGATGTCGCAGACAACCATCAGCAGCCACAACAAGAA
GAGGAGAGACCGCCTTCTTCAACGTCCTCGGCTCAcaagaagaaaaagag
aaagaaggAGCGCTCTTCCAGCAAGATTGGCCTCATCCGCACTGATGACG
ACGAAGACAACGACTCTTTGTCTTCTGCACGATCCCATAATTCATTGCGA
TCGGCTGAAGAAGAACGTTACATTCAAATGCAGAACGAACGCGTGATGCA
GAATTTCCAAGTCATGGGTGCCAGTACACCCAATAGCGGGCGCGAAAGTA
AATCGCACCCTGTTCCGTTATCCGAGGAGTCTGCGTACGAGAATATGAAA
GAAACGACACGAATCGAGTCTGTTGCCTCTAGACCTCGATCTCCATCACC
GAAACAATCACAGCGCATTTCATTTGCTAATCAACAAAACGATTACGTCA
TGCGAGTCGCTGATAAACGAGCTTCCAATAGTTCGTTGTCTACTCTGGCG
CTTCAAGATCATGACGAAGTCGGACAGCTCATTGCGGTTTCTCCTAAGAT
ACCATTATCACCGCATCGGGAAGAATCGTTCGAAAGTAAAACGTCATCCA
AACGTAGTAGCGCTCCCTCTGCTACCAAATTGATCGAAGTATCCAGTAAA
TCGTCCGGAATCGAAGCAGACGCTGATATCATCGATGAAGAAGACGAAAC
GAAAGACAGACCAGATTCACCTGCCATCAGTCTGTCGGCCGTGCGTCCGT
TAAGTGGTCGCCCTGAATCAGCCAAAGGAAGTGATATATCACGTATTTCA
CTATCTAAAGGAGGTCGTTTACAGAGTCCTCGAGTTAGTGTAGTCTCAGA
GATTACGAACATCACATTAGCCTCTGAGAAATTTGGTACCGAAACAGAGT
TAACAGGAGCTGTTCCCGTTGACGAGCAGAGGTCACAAGATCTTGTTTTG
AAGGATGCTTTTTCGGAGAGTGCAACGCTTGTGTTTGAAGACGAATTCGC
GAACGATAACGACCAAAACATTATGTTTGTCATCGATTTCTACTTGATGA
TTGCTTATTACACTGATCAGGAGAATGTTCTCAAGCGAGCTGTATTGAAC
ACTTGGCAGTTGTTTGTTCCAGTTTGCAAAGAAGCATACATCATTTTCGT
CATCGTCAATGGATTATTATTATTGATTGCAATGCTTCTCATTGGCCATC
TACTGCTCTTCCATTGTTATCTACTTTGCAAGAACTTGTCTACGTACGAC
TATATCATGCAGAGCCGAACAGCCACGTCTGCGTCCAAAGCTTCATTACC
ATCAGACGTGGAAACAGGAGACGAGCCTGCACCACCAGTACTCAGGCCAC
TATCGTCACAATCGCATACATATCAAGAGGTCGATGATGTCCGTAAAGAA
AAGAGTTCTTACGAGATGACCCACATCGAAGAAGACAAAACGTACGTCAA
AATCATCGACAAAACAAAACAGCCTTCAACTGAACAACCTTTACCAGTGG
TCGAAGAAATAGTCACCAACCAGAACGTGACAGTCGTTGAGACAGCCATA
GATGTCGCAGACAACCATCAGCAGCCACAACAAGAAGAGGAGAGACCGCC
TTCTTCAACGTCCTCGGCTCAcaagaagaaaaagagaaagaaggAGCGCT
CTTCCAGCAAGATTGGCCTCATCCGCACTGATGACGACGAAGACAACGAC
TCTTTGTCTTCTGCACGATCCCATAATTCATTGCGATCGGCTGAAGAAGA
ACGTTACATTCAAATGCAGAACGAACGCGTGATGCAGAATTTCCAAGTCA
TGGGTGCCAGTACACCCAATAGCGGGCGCGAAAGTAAATCGCACCCTGTT
CCGTTATCCGAGGAGTCTGCGTACGAGAATATGAAAGAAACGACACGAAT
CGAGTCTGTTGCCTCTAGACCTCGATCTCCATCACCGAAACAATCACAGC
GCATTTCATTTGCTAATCAACAAAACGATTACGTCATGCGAGTCGCTGAT
AAACGAGCTTCCAATAGTTCGTTGTCTACTCTGGCGCTTCAAGATCATGA
CGAAGTCGGACAGCTCATTGCGGTTTCTCCTAAGATACCATTATCACCGC
ATCGGGAAGAATCGTTCGAAAGTAAAACGTCATCCAAACGTAGTAGCGCT
CCCTCTGCTACCAAATTGATCGAAGTATCCAGTAAATCGTCCGGAATCGA
AGCAGACGCTGATATCATCGATGAAGAAGACGAAACGAAAGACAGACCAG
ATTCACCTGCCATCAGTCTGTCGGCCGTGCGTCCGTTAAGTGGTCGCCCT
GAATCAGCCAAAGGAAGTGATATATCACGTATTTCACTATCTAAAGGAGG
TCGTTTACAGAGTCCTCGAGTTAGTGTAGTCTCAGAGATTACGAACATCA
CATTAGCCTCTGAGAAATTTGGTACCGAAACAGAGTTAACAGGAGCTGTT
CCCGTTGACGAGCAGAGGTCACAAGATCTTGTTTTGAAGGATGCTTTTTC
GGAGAGTGCAACGCTTGTGTTTGAAGACGAATTCGCGAACGATAACGACC
AAAACATTATGTTTGTCATCGATTTCTACTTGATGATTGCTTATTACACT
GATCAGGAGAATGTTCTCAAGCGAGCTGTATTGAACACTTGGCAGTTGTT
TGTTCCAGTTTGCAAAGAAGCATACATCATTTTCGTCATCGTCAATGGAT
TATTATTATTGATTGCAATGCTTCTCATTGGCCATCTACTGCTCTTCCAT
TGTTATCTACTTTGCAAGAACTTGTCTACGTACGACTATATCATGCAGAG
CCGAACAGCCACGTCTGCGTCCAAAGCTTCATTACCATCAGACGTGGAAA
CAGGAGACGAGCCTGCACCACCAGTACTCAGGCCACTATCGTCACAATCG
CATACATATCAAGAGGTCGATGATGTCCGTAAAGAAAAGAGTTCTTACGA
GATGACCCACATCGAAGAAGACAAAACGTACGTCAAAATCATCGACAAAA
CAAAACAGCCTTCAACTGAACAACCTTTACCAGTGGTCGAAGAAATAGTC
ACCAACCAGAACGTGACAGTCGTTGAGACAGCCATAGATGTCGCAGACAA
CCATCAGCAGCCACAACAAGAAGAGGAGAGACCGCCTTCTTCAACGTCCT
CGGCTCAcaagaagaaaaagagaaagaaggAGCGCTCTTCCAGCAAGATT
GGCCTCATCCGCACTGATGACGACGAAGACAACGACTCTTTGTCTTCTGC
ACGATCCCATAATTCATTGCGATCGGCTGAAGAAGAACGTTACATTCAAA
TGCAGAACGAACGCGTGATGCAGAATTTCCAAGTCATGGGTGCCAGTACA
CCCAATAGCGGGCGCGAAAGTAAATCGCACCCTGTTCCGTTATCCGAGGA
GTCTGCGTACGAGAATATGAAAGAAACGACACGAATCGAGTCTGTTGCCT
CTAGACCTCGATCTCCATCACCGAAACAATCACAGCGCATTTCATTTGCT
AATCAACAAAACGATTACGTCATGCGAGTCGCTGATAAACGAGCTTCCAA
TAGTTCGTTGTCTACTCTGGCGCTTCAAGATCATGACGAAGTCGGACAGC
TCATTGCGGTTTCTCCTAAGATACCATTATCACCGCATCGGGAAGAATCG
TTCGAAAGTAAAACGTCATCCAAACGTAGTAGCGCTCCCTCTGCTACCAA
ATTGATCGAAGTATCCAGTAAATCGTCCGGAATCGAAGCAGACGCTGATA
TCATCGATGAAGAAGACGAAACGAAAGACAGACCAGATTCACCTGCCATC
AGTCTGTCGGCCGTGCGTCCGTTAAGTGGTCGCCCTGAATCAGCCAAAGG
AAGTGATATATCACGTATTTCACTATCTAAAGGAGGTCGTTTACAGAGTC
CTCGAGTTAGTGTAGTCTCAGAGATTACGAACATCACATTAGCCTCTGAG
AAATTTGGTACCGAAACAGAGTTAACAGGAGCTGTTCCCGTTGACGAGCA
GAGGTCACAAGATCTTGTTTTGAAGGATGCTTTTTCGGAGAGTGCAACGC
TTGTGTTTGAAGACGAATTCGCGAACGATAACGACCAAAACATTATGTTT
GTCATCGATTTCTACTTGATGATTGCTTATTACACTGATCAGGAGAATGT
TCTCAAGCGAGCTGTATTGAACACTTGGCAGTTGTTTGTTCCAGTTTGCA
AAGAAGCATACATCATTTTCGTCATCGTCAATGGATTATTATTATTGATT
GCAATGCTTCTCATTGGCCATCTACTGCTCTTCCATTGTTATCTACTTTG
CAAGAACTTGTCTACGTACGACTATATCATGCAGAGCCGAACAGCCACGT
CTGCGTCCAAAGCTTCATTACCATCAGACGTGGAAACAGGAGACGAGCCT
GCACCACCAGTACTCAGGCCACTATCGTCACAATCGCATACATATCAAGA
GGTCGATGATGTCCGTAAAGAAAAGAGTTCTTACGAGATGACCCACATCG
AAGAAGACAAAACGTACGTCAAAATCATCGACAAAACAAAACAGCCTTCA
ACTGAACAACCTTTACCAGTGGTCGAAGAAATAGTCACCAACCAGAACGT
GACAGTCGTTGAGACAGCCATAGATGTCGCAGACAACCATCAGCAGCCAC
AACAAGAAGAGGAGAGACCGCCTTCTTCAACGTCCTCGGCTCAcaagaag
aaaaagagaaagaaggAGCGCTCTTCCAGCAAGATTGGCCTCATCCGCAC
TGATGACGACGAAGACAACGACTCTTTGTCTTCTGCACGATCCCATAATT
CATTGCGATCGGCTGAAGAAGAACGTTACATTCAAATGCAGAACGAACGC
GTGATGCAGAATTTCCAAGTCATGGGTGCCAGTACACCCAATAGCGGGCG
CGAAAGTAAATCGCACCCTGTTCCGTTATCCGAGGAGTCTGCGTACGAGA
ATATGAAAGAAACGACACGAATCGAGTCTGTTGCCTCTAGACCTCGATCT
CCATCACCGAAACAATCACAGCGCATTTCATTTGCTAATCAACAAAACGA
TTACGTCATGCGAGTCGCTGATAAACGAGCTTCCAATAGTTCGTTGTCTA
CTCTGGCGCTTCAAGATCATGACGAAGTCGGACAGCTCATTGCGGTTTCT
CCTAAGATACCATTATCACCGCATCGGGAAGAATCGTTCGAAAGTAAAAC
GTCATCCAAACGTAGTAGCGCTCCCTCTGCTACCAAATTGATCGAAGTAT
CCAGTAAATCGTCCGGAATCGAAGCAGACGCTGATATCATCGATGAAGAA
GACGAAACGAAAGACAGACCAGATTCACCTGCCATCAGTCTGTCGGCCGT
GCGTCCGTTAAGTGGTCGCCCTGAATCAGCCAAAGGAAGTGATATATCAC
GTATTTCACTATCTAAAGGAGGTCGTTTACAGAGTCCTCGAGTTAGTGTA
GTCTCAGAGATTACGAACATCACATTAGCCTCTGAGAAATTTGGTACCGA
AACAGAGTTAACAGGAGCTGTTCCCGTTGACGAGCAGAGGTCACAAGATC
TTGTTTTGAAGGATGCTTTTTCGGAGAGTGCAACGCTTGTGTTTGAAGAC
GAATTCGCGAACGATAACGACCAAAACATTATGTTTGTCATCGATTTCTA
CTTGATGATTGCTTATTACACTGATCAGGAGAATGTTCTCAAGCGAGCTG
TATTGAACACTTGGCAGTTGTTTGTTCCAGTTTGCAAAGAAGCATACATC
ATTTTCGTCATCGTCAATGGATTATTATTATTGATTGCAATGCTTCTCAT
TGGCCATCTACTGCTCTTCCATTGTTATCTACTTTGCAAGAACTTGTCTA
CGTACGACTATATCATGCAGAGCCGAACAGCCACGTCTGCGTCCAAAGCT
TCATTACCATCAGACGTGGAAACAGGAGACGAGCCTGCACCACCAGTACT
CAGGCCACTATCGTCACAATCGCATACATATCAAGAGGTCGATGATGTCC
GTAAAGAAAAGAGTTCTTACGAGATGACCCACATCGAAGAAGACAAAACG
TACGTCAAAATCATCGACAAAACAAAACAGCCTTCAACTGAACAACCTTT
ACCAGTGGTCGAAGAAATAGTCACCAACCAGAACGTGACAGTCGTTGAGA
CAGCCATAGATGTCGCAGACAACCATCAGCAGCCACAACAAGAAGAGGAG
AGACCGCCTTCTTCAACGTCCTCGGCTCAcaagaagaaaaagagaaagaa
ggAGCGCTCTTCCAGCAAGATTGGCCTCATCCGCACTGATGACGACGAAG
ACAACGACTCTTTGTCTTCTGCACGATCCCATAATTCATTGCGATCGGCT
GAAGAAGAACGTTACATTCAAATGCAGAACGAACGCGTGATGCAGAATTT
CCAAGTCATGGGTGCCAGTACACCCAATAGCGGGCGCGAAAGTAAATCGC
ACCCTGTTCCGTTATCCGAGGAGTCTGCGTACGAGAATATGAAAGAAACG
ACACGAATCGAGTCTGTTGCCTCTAGACCTCGATCTCCATCACCGAAACA
ATCACAGCGCATTTCATTTGCTAATCAACAAAACGATTACGTCATGCGAG
TCGCTGATAAACGAGCTTCCAATAGTTCGTTGTCTACTCTGGCGCTTCAA
GATCATGACGAAGTCGGACAGCTCATTGCGGTTTCTCCTAAGATACCATT
ATCACCGCATCGGGAAGAATCGTTCGAAAGTAAAACGTCATCCAAACGTA
GTAGCGCTCCCTCTGCTACCAAATTGATCGAAGTATCCAGTAAATCGTCC
GGAATCGAAGCAGACGCTGATATCATCGATGAAGAAGACGAAACGAAAGA
CAGACCAGATTCACCTGCCATCAGTCTGTCGGCCGTGCGTCCGTTAAGTG
GTCGCCCTGAATCAGCCAAAGGAAGTGATATATCACGTATTTCACTATCT
AAAGGAGGTCGTTTACAGAGTCCTCGAGTTAGTGTAGTCTCAGAGATTAC
GAACATCACATTAGCCTCTGAGAAATTTGGTACCGAAACAGAGTTAACAG
GAGCTGTTCCCGTTGACGAGCAGAGGTCACAAGATCTTGTTTTGAAGGAT
GCTTTTTCGGAGAGTGCAACGCTTGTGTTTGAAGACGAATTCGCGAACGA
TAACGACCAAAACATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028167XLOC_028167Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044545-proteinTCONS_00044545-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044545-exon-sc0005757-1491911889:734..968TCONS_00044545-exon-sc0005757-1491911889:734..968Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1510915933:734..968TCONS_00044545-exon-sc0005757-1510915933:734..968Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1575043694:734..968TCONS_00044545-exon-sc0005757-1575043694:734..968Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1491911889:1172..1303TCONS_00044545-exon-sc0005757-1491911889:1172..1303Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1510915933:1172..1303TCONS_00044545-exon-sc0005757-1510915933:1172..1303Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1575043694:1172..1303TCONS_00044545-exon-sc0005757-1575043694:1172..1303Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1491911889:1635..1765TCONS_00044545-exon-sc0005757-1491911889:1635..1765Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1510915933:1635..1765TCONS_00044545-exon-sc0005757-1510915933:1635..1765Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1575043694:1635..1765TCONS_00044545-exon-sc0005757-1575043694:1635..1765Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1491911889:1982..2031TCONS_00044545-exon-sc0005757-1491911889:1982..2031Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1510915933:1982..2031TCONS_00044545-exon-sc0005757-1510915933:1982..2031Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1575043694:1982..2031TCONS_00044545-exon-sc0005757-1575043694:1982..2031Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1491911889:2239..2305TCONS_00044545-exon-sc0005757-1491911889:2239..2305Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1510915933:2239..2305TCONS_00044545-exon-sc0005757-1510915933:2239..2305Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1575043694:2239..2305TCONS_00044545-exon-sc0005757-1575043694:2239..2305Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1491911889:2561..3648TCONS_00044545-exon-sc0005757-1491911889:2561..3648Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1510915933:2561..3648TCONS_00044545-exon-sc0005757-1510915933:2561..3648Clytia hemisphaericaexon
TCONS_00044545-exon-sc0005757-1575043694:2561..3648TCONS_00044545-exon-sc0005757-1575043694:2561..3648Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005757supercontigsc0005757:734..3648 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.56259	1.08418	0.513209	0.633843	21.9913	18.4479	12.2662	14.386	9.41369	11.8711	8.82139	9.34419	13.8438	12.9758	3.88276	3.92165	7.65994	7.39942	27.6714	33.1207	5.41765	9.45402	4.71387	5.35138	16.1157	15.701	8.22816	9.10549	8.03631	9.87759
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044545 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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