TCONS_00044595 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044595
Unique NameTCONS_00044595
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044595 ID=TCONS_00044595|Name=TCONS_00044595|organism=Clytia hemisphaerica|type=transcript|length=281bp
GGATTATCTTATGCaaataaaatgattgatacCCGTGGTGGTCGTGCTAA
TGGTCGAAGGGGGAGTCGTggtagttgttgttgttgttgtagttgttgta
GTTGTCATAAGTCCAACATTTGCCAAAGTTATATCACTGGAGCTTGTCTG
AATTCTTTTTCCATCGATTAATAAGTATACAATTGTCTTGTAGCTAACAC
TAGTTGCATTTGTAGTGTaataacaattttgaaaagatcTTTTGCCGACA
GGAACTTTGGCGTTTTTTATCGTGTTATCAN
Run BLAST on NCBI

transcript from alignment at sc0005858:3..283

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044595 ID=TCONS_00044595|Name=TCONS_00044595|organism=Clytia hemisphaerica|type=transcript|length=281bp|location=Sequence derived from alignment at sc0005858:3..283 (Clytia hemisphaerica)
NTGATAACACGATAAAAAACGCCAAAGTTCCTGTCGGCAAAAgatctttt
caaaattgttattACACTACAAATGCAACTAGTGTTAGCTACAAGACAAT
TGTATACTTATTAATCGATGGAAAAAGAATTCAGACAAGCTCCAGTGATA
TAACTTTGGCAAATGTTGGACTTATGACAACtacaacaactacaacaaca
acaacaactaccACGACTCCCCCTTCGACCATTAGCACGACCACCACGGg
tatcaatcattttatttGCATAAGATAATCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028214XLOC_028214Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044595-exon-sc0005858-1491911889:3..283TCONS_00044595-exon-sc0005858-1491911889:3..283Clytia hemisphaericaexon
TCONS_00044595-exon-sc0005858-1510915933:3..283TCONS_00044595-exon-sc0005858-1510915933:3..283Clytia hemisphaericaexon
TCONS_00044595-exon-sc0005858-1575043694:3..283TCONS_00044595-exon-sc0005858-1575043694:3..283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005858supercontigsc0005858:3..283 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.444804	0	0	0.411201	0	1.97751	0.974952	3.24532	2.35921	1.78673	3.1116	3.29684	1.50185	3.68455	3.25682	2.83077	3.45188	0.559495	1.01732	2.61955	1.87031	0	0	2.16643	1.10362
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044595 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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