TCONS_00044609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044609
Unique NameTCONS_00044609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length434

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044609 ID=TCONS_00044609|Name=TCONS_00044609|organism=Clytia hemisphaerica|type=transcript|length=434bp
ctcagatggttaattttcaagcgccttcagaggtttaccgtacgcgtaag
aaaattatgaccagcTGTATCAGGTTACTTTGAAGTGACTTTCTTGCCGG
TCTTGAAAAACAATTATCTATCTGATCATTAAACTCTTTATCTGTCGCTT
AAACATCTGGTATGTTCTCCATGTAAAAACTTAGCTTCGTAATTGAGGTC
CTCGCTGCTTGTACCACACAGCCACCGCTTTTTAATTATGCAATTCTTGT
TTGTAGACTTCCACCTACCTGTTCTGTTTTCAAAACTAAGAGTTTTATTA
CGATTTGAAAGTTAGTGACATCAAAAGTTAATAGAATATTTTATCTAATT
TCatgtagacaggagacccgtcgtgtgtttttttataatttgatgtacac
aagacgggttcgagctgtgagtccaatattggac
Run BLAST on NCBI

transcript from alignment at sc0005875:9..442

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044609 ID=TCONS_00044609|Name=TCONS_00044609|organism=Clytia hemisphaerica|type=transcript|length=434bp|location=Sequence derived from alignment at sc0005875:9..442 (Clytia hemisphaerica)
gtccaatattggactcacagctcgaacccgtcttgtgtacatcaaattat
aaaaaaacacacgacgggtctcctgtctacatGAAATTAGATAAAATATT
CTATTAACTTTTGATGTCACTAACTTTCAAATCGTAATAAAACTCTTAGT
TTTGAAAACAGAACAGGTAGGTGGAAGTCTACAAACAAGAATTGCATAAT
TAAAAAGCGGTGGCTGTGTGGTACAAGCAGCGAGGACCTCAATTACGAAG
CTAAGTTTTTACATGGAGAACATACCAGATGTTTAAGCGACAGATAAAGA
GTTTAATGATCAGATAGATAATTGTTTTTCAAGACCGGCAAGAAAGTCAC
TTCAAAGTAACCTGATACAgctggtcataattttcttacgcgtacggtaa
acctctgaaggcgcttgaaaattaaccatctgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028227XLOC_028227Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044609-exon-sc0005875-1491911889:9..442TCONS_00044609-exon-sc0005875-1491911889:9..442Clytia hemisphaericaexon
TCONS_00044609-exon-sc0005875-1510915933:9..442TCONS_00044609-exon-sc0005875-1510915933:9..442Clytia hemisphaericaexon
TCONS_00044609-exon-sc0005875-1575043694:9..442TCONS_00044609-exon-sc0005875-1575043694:9..442Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005875supercontigsc0005875:9..442 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.0669	0.67524	0.786949	1.30271	1.58844	1.38223	1.07869	1.31471	0.881702	0.227359	1.39554	1.80247	0.749851	0.852077	0.496032	0.539526	1.2397	0	0.864694	0.392219	0.531718	0.803483	0.227853	0.472293	0.733944	2.36397	0.547587	0.273606	0	0.570438
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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