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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044674 ID=TCONS_00044674|Name=TCONS_00044674|organism=Clytia hemisphaerica|type=transcript|length=1062bp
tttgcctccactgatgcaagttaccatcAGGTAAAAAATGTATCACGGTA
TAAAATGTCTATCTATCTATAGATGTCTTTGACAGGTTTTGACACATTTT
GTCGAAACATATGGAAACCTCAAAAAAATGCTTTCTTGGACACAACCTAT
CACATAAACATGaattaatttataaaaaataaaattgaaataaccaATCA
ACAATCAACAATCCAAACAAGAAATGATGACGCCGTTAAAACATCAAAAG
ACATACTCCAAGCCAAAATGCATTTTATCAAATACAAGTTCACAGTATCT
CGtcaggaaaacaaccaaaacacaagtttcaaaagtttataaaatcCACA
AAACCTCTGCTCTGACCTCGTGAATAAGAACCAAGCATTAACTTGTTCCA
GAGGTATTGTCCATATAAGAGTTTGCATTctaaagcaaatatttcttgTA
CTGCCCATTCTTCTCATCAATTCGTCAACTTGGACCAGTTTCACATCTCA
ATATAATGTTAATACCATTTTGCCAATCATTTACAAAGCAAAGTTATGGG
GATGTAGCATTTTCTTCATGTCAAGCAAATGTCTCtaaaatctttaagtt
ggttggtttggtatACGTATACGTTCAACAGGTAGAGGGCAAAGTGATTG
TTTGTCCTTCTCTATCTCGTACCCATACATGTTGGGTTTTTAGCTTCAAC
CACTGCACTGTCCCACTGCACTGTCGAAAGGTTGTCTGAGTcatccaaat
atttttatctttcattttagatttgCTTTTTCTCAATATTTCTAACTGTA
AATAATAAGTGGTAGATCGATTCATTAAAGGAAATAAAGATAAGACACAA
AAATTGAGATTTCCAACTTTGCATCATTCTAGCCCATTACATCAAATTTG
ACTCTCTAATGTATATCCAGCAATATCTTGACAATCCCATCGAAATATAC
TCTCAAACTTGGTAAAAAAGTCCAATATATATTGCTGATTCGATTCACAC
AAATATCCAACCCCATATCGAAAGGTAATGATAtgttatttccaaaagaa
atgtaCTCTTTT Run BLAST on NCBI transcript from alignment at sc0005992:527..1588 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044674 ID=TCONS_00044674|Name=TCONS_00044674|organism=Clytia hemisphaerica|type=transcript|length=1062bp|location=Sequence derived from alignment at sc0005992:527..1588 (Clytia hemisphaerica)
AAAAGAGtacatttcttttggaaataacaTATCATTACCTTTCGATATGG
GGTTGGATATTTGTGTGAATCGAATCAGCAATATATATTGGACTTTTTTA
CCAAGTTTGAGAGTATATTTCGATGGGATTGTCAAGATATTGCTGGATAT
ACATTAGAGAGTCAAATTTGATGTAATGGGCTAGAATGATGCAAAGTTGG
AAATCTCAATTTTTGTGTCTTATCTTTATTTCCTTTAATGAATCGATCTA
CCACTTATTATTTACAGTTAGAAATATTGAGAAAAAGcaaatctaaaatg
aaagataaaaatatttggatgACTCAGACAACCTTTCGACAGTGCAGTGG
GACAGTGCAGTGGTTGAAGCTAAAAACCCAACATGTATGGGTACGAGATA
GAGAAGGACAAACAATCACTTTGCCCTCTACCTGTTGAACGTATACGTat
accaaaccaaccaacttaaagattttaGAGACATTTGCTTGACATGAAGA
AAATGCTACATCCCCATAACTTTGCTTTGTAAATGATTGGCAAAATGGTA
TTAACATTATATTGAGATGTGAAACTGGTCCAAGTTGACGAATTGATGAG
AAGAATGGGCAGTAcaagaaatatttgctttagAATGCAAACTCTTATAT
GGACAATACCTCTGGAACAAGTTAATGCTTGGTTCTTATTCACGAGGTCA
GAGCAGAGGTTTTGTGgattttataaacttttgaaacttgtgttttggtt
gttttcctgaCGAGATACTGTGAACTTGTATTTGATAAAATGCATTTTGG
CTTGGAGTATGTCTTTTGATGTTTTAACGGCGTCATCATTTCTTGTTTGG
ATTGTTGATTGTTGATtggttatttcaattttattttttataaattaatt
CATGTTTATGTGATAGGTTGTGTCCAAGAAAGCATTTTTTTGAGGTTTCC
ATATGTTTCGACAAAATGTGTCAAAACCTGTCAAAGACATCTATAGATAG
ATAGACATTTTATACCGTGATACATTTTTTACCTgatggtaacttgcatc
agtggaggcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044674-exon-sc0005992-1491911889:527..1588 | TCONS_00044674-exon-sc0005992-1491911889:527..1588 | Clytia hemisphaerica | exon |
| TCONS_00044674-exon-sc0005992-1510915933:527..1588 | TCONS_00044674-exon-sc0005992-1510915933:527..1588 | Clytia hemisphaerica | exon |
| TCONS_00044674-exon-sc0005992-1575043694:527..1588 | TCONS_00044674-exon-sc0005992-1575043694:527..1588 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005992 | supercontig | sc0005992:527..1588 . |
Blast
The following BLAST results are available for this feature:
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